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Cow genome map

           
Conread name:
           
Ss1.1-rsto206_h24.5
        

               
Conread position:
               
1-102
               

               
Cow position:
               
chr18:24267175-24267073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-116
               

               
Cow position:
               
chr18:29484676-29484565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
1-121
               

               
Cow position:
               
chr18:12270159-12270282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-124
               

               
Cow position:
               
chr18:6877962-6877839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-127
               

               
Cow position:
               
chr18:12585473-12585347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-130
               

               
Cow position:
               
chr18:11212912-11213041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
60, 71
               

               
Conread position:
               
1-131
               

               
Cow position:
               
chr18:41072534-41072667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr18:23658892-23658759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr18:48241609-48241736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr18:5076138-5076000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr18:16094890-16095028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr18:27078515-27078662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 114
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr18:52899734-52899882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr18:6322406-6322556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 81
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr18:23700202-23700053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr18:26001699-26001549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 126
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr18:52656859-52657008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr18:90128-90267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr18:4556718-4556566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr18:19193678-19193534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
132, 26
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr18:32908569-32908718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr18:56191537-56191385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr18:21751970-21752125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr18:4535317-4535164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr18:9846766-9846611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr18:3150694-3150540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
24, 78
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr18:19320645-19320800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr18:19640465-19640620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr18:51679206-51679051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr18:18819992-18819843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 36
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr18:27799865-27799683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
61, 123
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr18:49660373-49660188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 133
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr18:50993606-50993412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
24, 164
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr18:55697348-55697160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
180, 130
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr18:2849594-2849401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr18:26550582-26550772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
60, 81
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr18:48818582-48818383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
61, 154
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr18:29264784-29264590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
142, 71
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr18:55022150-55021947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr18:22569360-22569163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr18:14480146-14480341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
180, 36
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr18:11671477-11671683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
132, 157
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr18:25164866-25164657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
61, 152
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr18:35535618-35535412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
180, 159
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr18:54656956-54657172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
61, 24
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr18:28539719-28539509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 163
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr18:36524535-36524327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
199, 92
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr18:45168500-45168717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr18:10574720-10574937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 162
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr18:26822610-26822831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 143
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr18:32218588-32218368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 20
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr18:16134641-16134420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
60, 105
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr18:43431012-43431235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr18:4725814-4725592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr18:35818332-35818113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr18:11811644-11811864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
47, 99
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr18:45395660-45395894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
26, 161
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr18:51179078-51178856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
133, 150
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr18:4926741-4926969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 100
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr18:4749214-4748982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
61, 43
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr18:9007816-9008037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
71, 98
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr18:34621697-34621465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr18:7050616-7050854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr18:21810614-21810378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr18:215368-215131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr18:7930476-7930241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
133, 63
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr18:9974658-9974425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr18:19123845-19124078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr18:30385990-30385753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr18:30677328-30677565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr18:35612523-35612761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr18:10656114-10656343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
133, 15
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr18:21721613-21721377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
61, 143
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr18:22065694-22065453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr18:38075485-38075249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr18:48407456-48407691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
62, 161
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr18:55782759-55782518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
67, 155
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr18:33852522-33852761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr18:1216983-1216746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr18:15881187-15880953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr18:36224448-36224677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 71
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr18:32244355-32244114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
24, 139
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr18:12118178-12117934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 154
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr18:20329142-20328897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 143
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr18:34755257-34755015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
68, 124
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr18:37021593-37021843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr18:40472007-40472253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr18:49100702-49100462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr18:49161789-49161535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
61, 158
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr18:51826958-51827197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 138
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr18:49665490-49665248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
63, 47
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr18:3180087-3180336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
53, 19
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr18:33488543-33488291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
61, 113
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr18:54033709-54033961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 63
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:602452-602195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:16172604-16172347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:22237288-22237038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:23765336-23765081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:23803025-23803282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:25355529-25355786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:25924390-25924646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 75
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:26306283-26306539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
133, 152
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:26343740-26343997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:26572970-26572714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 19
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:27429111-27429369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:28968275-28968018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 153
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:35637827-35638078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 155
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:36512642-36512900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:37733705-37733962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
61, 142
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:41837102-41836848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 172
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:44235865-44236124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
56, 155
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:46108711-46108459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:48513666-48513415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:51485602-51485857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:56431161-56430917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 105
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr18:2099684-2099428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr18:4624762-4624510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr18:39709557-39709810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
60, 150
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr18:49200314-49200565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr18:32860315-32860566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
130, 142
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr18:14586809-14586540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
61, 80
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr18:20864654-20864915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
61, 40
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr18:24342293-24342543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
61, 8
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr18:38686763-38687015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr18:44802216-44801964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr18:9818507-9818765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
133, 25
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr18:47314631-47314362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
40, 157
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr18:4540205-4539950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
132, 81
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr18:21195672-21195416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
61, 144
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr18:23766755-23766484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
38, 110
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr18:28768034-28768293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
133, 104
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr18:28794399-28794141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 132
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr18:40758883-40759135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
244, 131
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr18:47511661-47511933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr18:19645845-19646104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 26
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr18:56165650-56165913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
61, 158
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr18:19619617-19619882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:1611429-1611699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:4666541-4666280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:5190012-5189756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
133, 70
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:6290451-6290718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
61, 101
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:8105276-8105013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
64, 93
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:11251368-11251098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:16857799-16858069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:18215008-18214739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:22591458-22591188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:25003210-25002948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
61, 144
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:29356970-29356695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
28, 5
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:32121394-32121130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:33907544-33907274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:38606903-38607155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 113
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:40329524-40329794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:46581513-46581243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:47183618-47183351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
56, 154
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:51579771-51579501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:54365522-54365252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr18:7359404-7359678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr18:11377038-11377299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
133, 15
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr18:19159297-19159037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
61, 72
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr18:20174463-20174194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
61, 161
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr18:29768581-29768851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
133, 150
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr18:33606297-33606566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr18:51298147-51298414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 133
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr18:55589808-55589555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr18:11322256-11322531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 156
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr18:13293176-13293448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
25, 72
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr18:3098645-3098378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
172, 57
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr18:11867020-11867277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
181, 31
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr18:18340286-18340026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
186, 57
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr18:2270836-2270562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 152
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr18:4315966-4316253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
32, 131
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr18:19977311-19977038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
61, 72
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr18:51756765-51757038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
130, 122
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr18:7486919-7487195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
61, 149
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr18:18562871-18562591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr18:40252987-40252705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr18:42608661-42608380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr18:45961592-45961325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
181, 87
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr18:55505071-55505352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
106, 21
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr18:17349668-17349952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr18:27990771-27991051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr18:31213797-31213512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr18:9010399-9010669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
180, 119
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr18:16418026-16417757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
133, 26
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr18:28101293-28101578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 154
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr18:42966505-42966811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr18:43539131-43539416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr18:7964898-7965177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr18:55701978-55701701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr18:601503-601235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr18:52635414-52635128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
180, 80
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr18:56172353-56172072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
60, 154
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr18:35076054-35076337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:3158933-3158649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
180, 34
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:3190758-3191048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
133, 173
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:4432739-4433030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:11618149-11618429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
134, 79
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:18091754-18091462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:23660977-23661268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:27554887-27554596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:31202043-31202334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:36632243-36631953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 87
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:40196125-40196416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 161
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:51346302-51346593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:26938652-26938941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
180, 36
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:29648456-29648749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
132, 26
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr18:22092448-22092738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr18:55462042-55461745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 118
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr18:43075929-43076231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr18:3027698-3027395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
61, 95
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr18:10575779-10576070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr18:14815668-14815377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
63, 133
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr18:44262286-44262596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr18:45104779-45104476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
60, 73
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr18:45570691-45570979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 26
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr18:56150989-56150678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
61, 155
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr18:56181788-56181496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr18:19850077-19849782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
180, 44
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr18:11183609-11183928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
133, 160
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr18:13270916-13271240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr18:22396413-22396089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr18:29079751-29080068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr18:31139763-31140081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr18:51601653-51601333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr18:55046241-55046561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr18:45646437-45646111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
133, 61
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr18:35636680-35636340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
2-150
               

               
Cow position:
               
chr18:21880659-21880511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 32
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr18:26843978-26843796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
179, 71
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr18:1664144-1664351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr18:23949742-23949529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
60, 152
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr18:53897346-53897566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
132, 141
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr18:46881015-46880790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
59, 160
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr18:30248460-30248232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr18:6046816-6046571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 113
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr18:24956964-24957209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
60, 150
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr18:11515149-11514893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
60, 156
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr18:37509955-37510213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 154
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr18:36907506-36907238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
60, 172
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr18:36912032-36911764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
60, 172
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr18:1663063-1662793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr18:51713041-51712771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
60, 150
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr18:20998946-20998689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
132, 56
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr18:36458602-36458868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 148
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr18:41270755-41271023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
48, 56
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr18:45904224-45903961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
61, 129
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr18:7955816-7956080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
182, 62
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr18:19378017-19377739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
60, 142
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr18:19356538-19356818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
60, 100
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr18:3209389-3209670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr18:8624316-8624026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 156
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr18:18627659-18627360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
62, 142
               

               
Conread position:
               
2-305
               

               
Cow position:
               
chr18:4796637-4796938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 111
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr18:7947043-7947361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 109
               

               
Conread position:
               
3-127
               

               
Cow position:
               
chr18:30360451-30360326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
3-148
               

               
Cow position:
               
chr18:32017370-32017517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
3-151
               

               
Cow position:
               
chr18:23429452-23429601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 13
               

               
Conread position:
               
3-200
               

               
Cow position:
               
chr18:52596065-52596253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
128, 34
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr18:21682299-21682077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
178, 42
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr18:2609064-2608827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
42, 155
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr18:9029287-9029520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr18:238675-238427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
59, 120
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr18:13172856-13172599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
36, 154
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr18:29862593-29862344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 41
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr18:38157536-38157280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
59, 142
               

               
Conread position:
               
3-255
               

               
Cow position:
               
chr18:21528074-21528327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
131, 173
               

               
Conread position:
               
3-259
               

               
Cow position:
               
chr18:22121211-22120956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 42
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr18:29058823-29058565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr18:47745721-47745989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
59, 180
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr18:33793373-33793644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 134
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr18:29387896-29388167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
197, 110
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr18:52382366-52382668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
29, 142
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr18:12776104-12775816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
59, 130
               

               
Conread position:
               
3-311
               

               
Cow position:
               
chr18:43065181-43065501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
3-321
               

               
Cow position:
               
chr18:4182518-4182207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
131, 24
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr18:51239907-51240092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
58, 90
               

               
Conread position:
               
4-259
               

               
Cow position:
               
chr18:7965937-7966177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
58, 24
               

               
Conread position:
               
4-282
               

               
Cow position:
               
chr18:11233101-11233379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
58, 119
               

               
Conread position:
               
5-278
               

               
Cow position:
               
chr18:39002124-39001858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
57, 107
               

               
Conread position:
               
6-146
               

               
Cow position:
               
chr18:15324099-15323960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
6-194
               

               
Cow position:
               
chr18:7076435-7076627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
56, 149
               

               
Conread position:
               
6-255
               

               
Cow position:
               
chr18:55552637-55552893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 148
               

               
Conread position:
               
6-266
               

               
Cow position:
               
chr18:5457583-5457336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
175, 21
               

               
Conread position:
               
6-266
               

               
Cow position:
               
chr18:52637862-52637588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
31, 162
               

               
Conread position:
               
6-269
               

               
Cow position:
               
chr18:16045328-16045067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 131
               

               
Conread position:
               
7-154
               

               
Cow position:
               
chr18:51191080-51190933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
55, 103
               

               
Conread position:
               
7-220
               

               
Cow position:
               
chr18:4323224-4323439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
55, 145
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr18:81429-81656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 147
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr18:52644295-52644064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
7-255
               

               
Cow position:
               
chr18:22874546-22874795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 75
               

               
Conread position:
               
7-259
               

               
Cow position:
               
chr18:11831811-11832049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 126
               

               
Conread position:
               
7-259
               

               
Cow position:
               
chr18:26535843-26535586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
175, 106
               

               
Conread position:
               
7-260
               

               
Cow position:
               
chr18:6881664-6881424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
7-262
               

               
Cow position:
               
chr18:51406222-51405978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
7-263
               

               
Cow position:
               
chr18:29958473-29958231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
174, 116
               

               
Conread position:
               
7-266
               

               
Cow position:
               
chr18:9365585-9365848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
55, 154
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr18:35012633-35012382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 147
               

               
Conread position:
               
7-291
               

               
Cow position:
               
chr18:29065701-29065426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
8-204
               

               
Cow position:
               
chr18:55119548-55119749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 149
               

               
Conread position:
               
8-266
               

               
Cow position:
               
chr18:51458824-51458562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 81
               

               
Conread position:
               
9-122
               

               
Cow position:
               
chr18:4833207-4833091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
9-266
               

               
Cow position:
               
chr18:33272623-33272865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
9-274
               

               
Cow position:
               
chr18:55001061-55000802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
117, 16
               

               
Conread position:
               
9-276
               

               
Cow position:
               
chr18:43284076-43283816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
125, 20
               

               
Conread position:
               
9-285
               

               
Cow position:
               
chr18:19273424-19273151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
9-297
               

               
Cow position:
               
chr18:16842391-16842101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
22, 125
               

               
Conread position:
               
9-305
               

               
Cow position:
               
chr18:37023881-37023585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
125, 144
               

               
Conread position:
               
10-261
               

               
Cow position:
               
chr18:51691792-51691537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
52, 142
               

               
Conread position:
               
10-278
               

               
Cow position:
               
chr18:36445108-36445383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr18:44549226-44548961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
12-317
               

               
Cow position:
               
chr18:32285070-32285369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
122, 101
               

               
Conread position:
               
12-317
               

               
Cow position:
               
chr18:32301215-32301514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
122, 101
               

               
Conread position:
               
13-253
               

               
Cow position:
               
chr18:6275495-6275738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
50, 141
               

               
Conread position:
               
13-281
               

               
Cow position:
               
chr18:31672824-31672565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
169, 46
               

               
Conread position:
               
13-296
               

               
Cow position:
               
chr18:49543161-49543436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
13-325
               

               
Cow position:
               
chr18:13632272-13631967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 139
               

               
Conread position:
               
14-191
               

               
Cow position:
               
chr18:5742755-5742581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
100, 15
               

               
Conread position:
               
14-244
               

               
Cow position:
               
chr18:19362606-19362377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
120, 20
               

               
Conread position:
               
14-254
               

               
Cow position:
               
chr18:23447403-23447161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
28, 118
               

               
Conread position:
               
14-263
               

               
Cow position:
               
chr18:20641805-20641560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
48, 123
               

               
Conread position:
               
16-162
               

               
Cow position:
               
chr18:7969893-7970045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
16-199
               

               
Cow position:
               
chr18:46135002-46135178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 97
               

               
Conread position:
               
16-263
               

               
Cow position:
               
chr18:56361920-56361674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
45, 118
               

               
Conread position:
               
16-277
               

               
Cow position:
               
chr18:17004932-17005200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
46, 138
               

               
Conread position:
               
16-310
               

               
Cow position:
               
chr18:3133060-3132779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
46, 65
               

               
Conread position:
               
17-303
               

               
Cow position:
               
chr18:4884832-4884554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 127
               

               
Conread position:
               
18-207
               

               
Cow position:
               
chr18:24834911-24834719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
29, 144
               

               
Conread position:
               
18-217
               

               
Cow position:
               
chr18:39279314-39279112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
29, 135
               

               
Conread position:
               
18-228
               

               
Cow position:
               
chr18:1733507-1733301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
162, 112
               

               
Conread position:
               
18-282
               

               
Cow position:
               
chr18:34052303-34052044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
118, 99
               

               
Conread position:
               
19-247
               

               
Cow position:
               
chr18:32876372-32876604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 126
               

               
Conread position:
               
19-257
               

               
Cow position:
               
chr18:27388239-27388476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
20-266
               

               
Cow position:
               
chr18:18958105-18957864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 113
               

               
Conread position:
               
21-200
               

               
Cow position:
               
chr18:44484071-44483892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 67
               

               
Conread position:
               
21-269
               

               
Cow position:
               
chr18:15025364-15025599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
26, 110
               

               
Conread position:
               
22-221
               

               
Cow position:
               
chr18:5991184-5991387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 131
               

               
Conread position:
               
22-255
               

               
Cow position:
               
chr18:4625589-4625817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
112, 8
               

               
Conread position:
               
22-256
               

               
Cow position:
               
chr18:55584383-55584158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
111, 8
               

               
Conread position:
               
22-259
               

               
Cow position:
               
chr18:35827726-35827485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
23-277
               

               
Cow position:
               
chr18:26286602-26286852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
98, 48
               

               
Conread position:
               
24-255
               

               
Cow position:
               
chr18:43823263-43823029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
41, 130
               

               
Conread position:
               
25-237
               

               
Cow position:
               
chr18:15172724-15172934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr18:26586974-26586721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
37, 128
               

               
Conread position:
               
25-285
               

               
Cow position:
               
chr18:24022075-24022327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
106, 25
               

               
Conread position:
               
28-253
               

               
Cow position:
               
chr18:14127274-14127048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
34, 130
               

               
Conread position:
               
30-237
               

               
Cow position:
               
chr18:46727289-46727501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 127
               

               
Conread position:
               
31-305
               

               
Cow position:
               
chr18:4858212-4857928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
48, 95
               

               
Conread position:
               
32-264
               

               
Cow position:
               
chr18:16044456-16044222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
30, 115
               

               
Conread position:
               
32-281
               

               
Cow position:
               
chr18:16726345-16726595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
33-264
               

               
Cow position:
               
chr18:3115159-3115393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 39
               

               
Conread position:
               
34-193
               

               
Cow position:
               
chr18:23708868-23708707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
28, 120
               

               
Conread position:
               
34-259
               

               
Cow position:
               
chr18:19143816-19143587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
34-266
               

               
Cow position:
               
chr18:11368063-11367828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 103
               

               
Conread position:
               
35-259
               

               
Cow position:
               
chr18:20271319-20271095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
37, 111
               

               
Conread position:
               
35-261
               

               
Cow position:
               
chr18:4649034-4648816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 95
               

               
Conread position:
               
35-263
               

               
Cow position:
               
chr18:30673939-30673711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
35-263
               

               
Cow position:
               
chr18:46048466-46048688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
165, 23
               

               
Conread position:
               
35-266
               

               
Cow position:
               
chr18:11191136-11191361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
182, 11
               

               
Conread position:
               
35-266
               

               
Cow position:
               
chr18:20127401-20127176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
195, 98
               

               
Conread position:
               
35-276
               

               
Cow position:
               
chr18:33157522-33157758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 115
               

               
Conread position:
               
35-276
               

               
Cow position:
               
chr18:47868156-47868405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
27, 119
               

               
Conread position:
               
35-278
               

               
Cow position:
               
chr18:11680421-11680669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
27, 119
               

               
Conread position:
               
35-295
               

               
Cow position:
               
chr18:36477901-36478160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
35-305
               

               
Cow position:
               
chr18:51211883-51212149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 119
               

               
Conread position:
               
35-357
               

               
Cow position:
               
chr18:25647548-25647226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
37-259
               

               
Cow position:
               
chr18:45572812-45573033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
37-269
               

               
Cow position:
               
chr18:11166682-11166915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
37-269
               

               
Cow position:
               
chr18:13359765-13359999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
37-269
               

               
Cow position:
               
chr18:22214189-22214416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 84
               

               
Conread position:
               
37-276
               

               
Cow position:
               
chr18:34527394-34527156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
97, 10
               

               
Conread position:
               
37-278
               

               
Cow position:
               
chr18:52632702-52632465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
25, 154
               

               
Conread position:
               
38-266
               

               
Cow position:
               
chr18:18919249-18919025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 79
               

               
Conread position:
               
38-276
               

               
Cow position:
               
chr18:56159169-56159403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
24, 51
               

               
Conread position:
               
38-282
               

               
Cow position:
               
chr18:1144489-1144238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
96, 43
               

               
Conread position:
               
38-286
               

               
Cow position:
               
chr18:9557685-9557930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
38-311
               

               
Cow position:
               
chr18:48290734-48290468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
24, 95
               

               
Conread position:
               
39-244
               

               
Cow position:
               
chr18:39115439-39115231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
23, 113
               

               
Conread position:
               
39-263
               

               
Cow position:
               
chr18:56183643-56183868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
39-266
               

               
Cow position:
               
chr18:33299603-33299833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
86, 92
               

               
Conread position:
               
39-269
               

               
Cow position:
               
chr18:6610153-6609923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
23, 90
               

               
Conread position:
               
39-280
               

               
Cow position:
               
chr18:55789287-55789046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
23, 118
               

               
Conread position:
               
40-238
               

               
Cow position:
               
chr18:11694986-11695177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
40-266
               

               
Cow position:
               
chr18:50082540-50082320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 94
               

               
Conread position:
               
41-259
               

               
Cow position:
               
chr18:47931153-47930940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 97
               

               
Conread position:
               
41-266
               

               
Cow position:
               
chr18:42747303-42747524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
140, 67
               

               
Conread position:
               
42-266
               

               
Cow position:
               
chr18:47517500-47517285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
139, 89
               

               
Conread position:
               
42-269
               

               
Cow position:
               
chr18:268103-267882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
43-235
               

               
Cow position:
               
chr18:46453170-46452976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 102
               

               
Conread position:
               
43-281
               

               
Cow position:
               
chr18:31725175-31724931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 28
               

               
Conread position:
               
44-195
               

               
Cow position:
               
chr18:53539096-53538946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
90, 21
               

               
Conread position:
               
44-266
               

               
Cow position:
               
chr18:31586654-31586436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
46-284
               

               
Cow position:
               
chr18:36097913-36098152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
65, 87
               

               
Conread position:
               
47-278
               

               
Cow position:
               
chr18:25282842-25282609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
47-287
               

               
Cow position:
               
chr18:4369067-4368830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 107
               

               
Conread position:
               
47-305
               

               
Cow position:
               
chr18:33407324-33407582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
47-305
               

               
Cow position:
               
chr18:55498779-55499037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 24
               

               
Conread position:
               
49-263
               

               
Cow position:
               
chr18:3166773-3166569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 95
               

               
Conread position:
               
50-263
               

               
Cow position:
               
chr18:48453410-48453617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
84, 103
               

               
Conread position:
               
50-265
               

               
Cow position:
               
chr18:28924116-28923907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
51-284
               

               
Cow position:
               
chr18:2592456-2592220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
11, 93
               

               
Conread position:
               
52-235
               

               
Cow position:
               
chr18:18976802-18976988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
10, 102
               

               
Conread position:
               
52-263
               

               
Cow position:
               
chr18:51656335-51656114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 137
               

               
Conread position:
               
52-269
               

               
Cow position:
               
chr18:2569518-2569726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
10, 103
               

               
Conread position:
               
61-235
               

               
Cow position:
               
chr18:30794162-30794333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 93
               

               
Conread position:
               
62-251
               

               
Cow position:
               
chr18:21773218-21773414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
74, 99
               

               
Conread position:
               
62-266
               

               
Cow position:
               
chr18:21768356-21768563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 91
               

               
Conread position:
               
64-283
               

               
Cow position:
               
chr18:37382367-37382144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
70, 89
               

               
Conread position:
               
66-211
               

               
Cow position:
               
chr18:52402784-52402641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
116, 9
               

               
Conread position:
               
66-246
               

               
Cow position:
               
chr18:5711934-5711757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
68, 80
               

               
Conread position:
               
66-266
               

               
Cow position:
               
chr18:19761431-19761627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 77
               

               
Conread position:
               
66-266
               

               
Cow position:
               
chr18:29796692-29796493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
67-282
               

               
Cow position:
               
chr18:11691678-11691463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
72, 93
               

               
Conread position:
               
70-228
               

               
Cow position:
               
chr18:7058966-7059122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
71-269
               

               
Cow position:
               
chr18:10322538-10322740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 88
               

               
Conread position:
               
71-269
               

               
Cow position:
               
chr18:35582364-35582166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
63, 82
               

               
Conread position:
               
75-278
               

               
Cow position:
               
chr18:12023891-12023691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
106, 57
               

               
Conread position:
               
85-269
               

               
Cow position:
               
chr18:32883053-32883241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 69
               

               
Conread position:
               
85-277
               

               
Cow position:
               
chr18:21205118-21205305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 47
               

               
Conread position:
               
86-281
               

               
Cow position:
               
chr18:20482121-20481936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
53, 67
               

               
Conread position:
               
92-263
               

               
Cow position:
               
chr18:12809618-12809787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
42, 61
               

               
Conread position:
               
92-276
               

               
Cow position:
               
chr18:24946054-24945867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 61
               

               
Conread position:
               
92-304
               

               
Cow position:
               
chr18:33007815-33008027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
42, 61
               

               
Conread position:
               
98-263
               

               
Cow position:
               
chr18:25984808-25984641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
83, 62
               

               
Conread position:
               
101-282
               

               
Cow position:
               
chr18:42479824-42479641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
101-287
               

               
Cow position:
               
chr18:219100-219287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
80, 32
               

               
Conread position:
               
101-287
               

               
Cow position:
               
chr18:48829019-48828827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
43, 36
               

               
Conread position:
               
112-283
               

               
Cow position:
               
chr18:3211647-3211819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
24, 31
               
Show alignments to all cow chromosomes.