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Cow genome map

           
Conread name:
           
Ss1.1-rsto206_h24.5
        

               
Conread position:
               
1-102
               

               
Cow position:
               
chr27:29815864-29815762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr27:23502718-23502589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr27:12191192-12191336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr27:26545666-26545813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr27:24295347-24295199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr27:26935116-26935266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr27:29812215-29812365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr27:16984044-16983894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 116
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr27:20634708-20634555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr27:23595527-23595374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr27:197553-197398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr27:2429978-2430133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr27:3239755-3239910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr27:13902037-13902192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr27:15342875-15343021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr27:18218801-18218646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr27:23511376-23511224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr27:27578830-27578675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr27:15927029-15926867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr27:13273753-13273915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr27:26581189-26581367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr27:16823071-16822883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
60, 146
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr27:1173286-1173480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
61, 154
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr27:7418622-7418819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 109
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr27:11489021-11489212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
60, 132
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr27:16331594-16331399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr27:26313942-26314145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
61, 73
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr27:13860488-13860688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr27:10384345-10384561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr27:22255144-22254927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 142
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr27:1672015-1672226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr27:5882256-5882472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr27:14530587-14530804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 141
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr27:4719638-4719852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
128, 56
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr27:30388959-30389178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
61, 146
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr27:164937-164716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
134, 181
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr27:2332411-2332632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr27:3231383-3231162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr27:9045918-9045695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 183
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr27:12240059-12240276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 136
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr27:14633095-14632877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
61, 95
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr27:16305523-16305735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 123
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr27:16960454-16960237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr27:6674493-6674276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
133, 89
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr27:8195473-8195257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr27:22394426-22394208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr27:22549525-22549746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
61, 66
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr27:31230838-31231054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
135, 28
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr27:6909763-6909539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr27:10582620-10582397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 162
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr27:2557069-2556838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
61, 152
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr27:16787089-16786854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 156
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr27:299126-299354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr27:27521747-27521982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr27:14670125-14670357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
133, 70
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr27:1294161-1294389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 136
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr27:5861462-5861222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr27:5990139-5989906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 167
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr27:8959103-8958864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
60, 184
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr27:11417635-11417872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr27:16030484-16030249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr27:26952794-26952554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
61, 146
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr27:29831431-29831666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
133, 76
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr27:30417931-30417703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
157, 70
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr27:9335104-9335344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 32
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr27:2627815-2628060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 143
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr27:9988964-9988725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 93
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr27:11422571-11422815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 152
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr27:18507889-18507658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
61, 145
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr27:28018591-28018349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr27:28907325-28907079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr27:19299652-19299406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr27:15871419-15871174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
61, 127
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr27:651700-651953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr27:30582994-30582746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr27:30361463-30361207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:32706-32963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:773410-773153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:1189556-1189810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:2298669-2298412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 182
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:2390552-2390295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:4881865-4881608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:5836743-5836998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:12549366-12549109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:14129760-14129506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
133, 93
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:14906988-14906732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
133, 152
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:15032978-15032724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 26
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:15644200-15644457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:18446324-18446582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 152
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:19423461-19423203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:19522795-19522538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:20811330-20811582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 134
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:21349491-21349740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:26330815-26331072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
60, 153
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:28984684-28984937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr27:11723647-11723903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr27:16620245-16619991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 26
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr27:26785725-26785987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 44
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr27:1903320-1903060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr27:26787107-26787363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 130
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr27:732820-732570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
133, 26
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr27:15315746-15315504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
196, 59
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr27:18544255-18543993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
60, 153
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr27:23070106-23070360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
133, 32
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr27:29208053-29207812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
133, 23
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr27:30561173-30560913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr27:22603419-22603172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr27:15319708-15319446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
60, 13
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr27:23576282-23576544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 152
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr27:26224012-26224278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr27:28189960-28190219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
61, 149
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr27:30362500-30362241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 97
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr27:16263590-16263335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr27:21977880-21978145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
60, 121
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr27:26807309-26807569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 21
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr27:7289852-7290111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 161
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:1522917-1523187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:4819453-4819710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:5881442-5881711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 143
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:6454470-6454203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
130, 59
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:8187736-8188006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:11273824-11273569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:12016597-12016329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 37
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:12147806-12148076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:19325757-19325487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:24241205-24240935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:24445899-24446163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
61, 145
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:26341364-26341634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:26508904-26509168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
133, 63
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:26584561-26584293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:27737676-27737934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
199, 36
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:28921642-28921905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:29035468-29035198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:29977512-29977244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
90, 26
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:30684165-30683895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:30744564-30744833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:30868483-30868748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr27:31566327-31566597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr27:12429669-12429393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
36, 156
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr27:14298103-14298375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr27:15925591-15925330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
61, 44
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr27:17473080-17472798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 155
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr27:25791069-25790792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
33, 140
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr27:15867644-15867385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
133, 58
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr27:7958578-7958857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 130
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr27:26796233-26795967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
61, 137
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr27:11255770-11255502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
61, 131
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr27:8291753-8292023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
60, 168
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr27:2957661-2957386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr27:4769229-4769511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr27:15866478-15866195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
180, 51
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr27:21139084-21138802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 149
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr27:26919656-26919923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr27:27038583-27038858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr27:24227536-24227815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr27:6550708-6550434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr27:13875985-13875706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
136, 58
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr27:27019846-27020128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr27:27683857-27684143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
42, 144
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr27:23128711-23128431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 49
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr27:26424332-26424609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
105, 51
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr27:22035116-22035403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr27:26856954-26857224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr27:28931533-28931818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr27:28276527-28276251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr27:25411258-25411548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
37, 137
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr27:815622-815335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
60, 148
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr27:29400073-29399785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
118, 29
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr27:1521593-1521884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr27:8932521-8932230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr27:15100553-15100844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr27:19487070-19486779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr27:23016113-23015824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
61, 143
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr27:27699768-27700059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr27:25924040-25923760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
61, 44
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr27:17397198-17397495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
132, 39
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr27:22171556-22171255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 78
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr27:26999168-26999464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr27:31372723-31373025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr27:19388274-19387963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr27:21668868-21669172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
61, 80
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr27:11535841-11536153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 24
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr27:21408291-21408611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
42, 163
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr27:22426573-22426880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
80, 70
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr27:7412640-7412330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr27:7971827-7971511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr27:10992625-10992297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
57, 160
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr27:18811944-18811625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr27:23080000-23080318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr27:29198288-29198606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr27:30014818-30015136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr27:15454470-15454139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
61, 144
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr27:10579852-10580205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 143
               

               
Conread position:
               
2-134
               

               
Cow position:
               
chr27:11634231-11634098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
2-153
               

               
Cow position:
               
chr27:22293456-22293609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
2-154
               

               
Cow position:
               
chr27:13977134-13977290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr27:27455201-27455376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
2-191
               

               
Cow position:
               
chr27:6899459-6899650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
60, 132
               

               
Conread position:
               
2-202
               

               
Cow position:
               
chr27:491143-490947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
25, 30
               

               
Conread position:
               
2-207
               

               
Cow position:
               
chr27:2900985-2901193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 127
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr27:2643682-2643885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
179, 43
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr27:160746-160518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
60, 156
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr27:16513626-16513859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
146, 131
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr27:6074172-6073944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr27:3988866-3988621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 180
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr27:4983345-4983601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
60, 152
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr27:5915419-5915672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 152
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr27:22655121-22655377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
60, 150
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr27:27141848-27141603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
132, 73
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr27:1675626-1675361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 93
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr27:8962013-8962264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
60, 118
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr27:11435075-11435340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr27:8062106-8062371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
132, 25
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr27:9090545-9090822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 152
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr27:4385809-4386082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 132
               

               
Conread position:
               
2-305
               

               
Cow position:
               
chr27:15203975-15204271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
3-119
               

               
Cow position:
               
chr27:17645943-17646060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chr27:12751434-12751643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr27:27622758-27622993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr27:13317710-13317943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
59, 33
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr27:19931408-19931158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
157, 130
               

               
Conread position:
               
3-260
               

               
Cow position:
               
chr27:8629619-8629875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
59, 89
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr27:22418512-22418772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
133, 34
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr27:2589976-2589710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
59, 155
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr27:21350760-21351032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 159
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr27:15858836-15859106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
131, 140
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr27:4664727-4664455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
38, 133
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr27:8430172-8430470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 77
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr27:12005765-12005476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 155
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr27:13198161-13197883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
59, 26
               

               
Conread position:
               
4-255
               

               
Cow position:
               
chr27:19718170-19717927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
130, 30
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr27:20067733-20068017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
4-311
               

               
Cow position:
               
chr27:24331983-24331672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 159
               

               
Conread position:
               
4-365
               

               
Cow position:
               
chr27:20757804-20758147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
177, 58
               

               
Conread position:
               
5-132
               

               
Cow position:
               
chr27:20636102-20635977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
57, 89
               

               
Conread position:
               
5-253
               

               
Cow position:
               
chr27:21393251-21393495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
69, 142
               

               
Conread position:
               
6-200
               

               
Cow position:
               
chr27:23925918-23926109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 31
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr27:18922702-18922482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
6-236
               

               
Cow position:
               
chr27:29799196-29798965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
56, 127
               

               
Conread position:
               
6-244
               

               
Cow position:
               
chr27:13409916-13410158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 147
               

               
Conread position:
               
6-255
               

               
Cow position:
               
chr27:11412968-11412722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
59, 71
               

               
Conread position:
               
6-258
               

               
Cow position:
               
chr27:15272158-15271911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
56, 125
               

               
Conread position:
               
6-262
               

               
Cow position:
               
chr27:25809271-25809525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
194, 123
               

               
Conread position:
               
6-262
               

               
Cow position:
               
chr27:31147421-31147674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
56, 117
               

               
Conread position:
               
6-269
               

               
Cow position:
               
chr27:19589727-19589464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
85, 50
               

               
Conread position:
               
7-121
               

               
Cow position:
               
chr27:27896996-27897111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr27:26436623-26436862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
55, 65
               

               
Conread position:
               
7-250
               

               
Cow position:
               
chr27:27449186-27449417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
7-253
               

               
Cow position:
               
chr27:2900061-2899818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
127, 9
               

               
Conread position:
               
7-253
               

               
Cow position:
               
chr27:2930345-2930594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
55, 165
               

               
Conread position:
               
7-266
               

               
Cow position:
               
chr27:23930215-23929968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
174, 125
               

               
Conread position:
               
8-197
               

               
Cow position:
               
chr27:23452730-23452543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 146
               

               
Conread position:
               
8-235
               

               
Cow position:
               
chr27:7425888-7426119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
5, 149
               

               
Conread position:
               
8-235
               

               
Cow position:
               
chr27:28207048-28206817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
54, 146
               

               
Conread position:
               
8-263
               

               
Cow position:
               
chr27:22440392-22440135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
54, 140
               

               
Conread position:
               
8-263
               

               
Cow position:
               
chr27:23454900-23455160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
129, 33
               

               
Conread position:
               
8-269
               

               
Cow position:
               
chr27:27843742-27844006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 146
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr27:23472506-23472238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
8-305
               

               
Cow position:
               
chr27:24014491-24014781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
54, 66
               

               
Conread position:
               
9-255
               

               
Cow position:
               
chr27:26427879-26428130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 145
               

               
Conread position:
               
9-277
               

               
Cow position:
               
chr27:26398010-26398276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 142
               

               
Conread position:
               
11-263
               

               
Cow position:
               
chr27:24477647-24477411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
123, 60
               

               
Conread position:
               
11-263
               

               
Cow position:
               
chr27:27388781-27389023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
11-283
               

               
Cow position:
               
chr27:26492453-26492723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
44, 143
               

               
Conread position:
               
13-266
               

               
Cow position:
               
chr27:11081441-11081186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
49, 76
               

               
Conread position:
               
13-276
               

               
Cow position:
               
chr27:28518530-28518277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 119
               

               
Conread position:
               
14-191
               

               
Cow position:
               
chr27:22608892-22609070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
48, 140
               

               
Conread position:
               
15-281
               

               
Cow position:
               
chr27:536700-536443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
47, 79
               

               
Conread position:
               
15-310
               

               
Cow position:
               
chr27:30890529-30890236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
16-237
               

               
Cow position:
               
chr27:16284715-16284492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
35, 142
               

               
Conread position:
               
16-277
               

               
Cow position:
               
chr27:22220796-22220536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
46, 142
               

               
Conread position:
               
16-295
               

               
Cow position:
               
chr27:30856149-30856416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 86
               

               
Conread position:
               
16-311
               

               
Cow position:
               
chr27:10980106-10979815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
46, 136
               

               
Conread position:
               
18-269
               

               
Cow position:
               
chr27:6541865-6541618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
45, 117
               

               
Conread position:
               
19-132
               

               
Cow position:
               
chr27:21283317-21283203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
19-266
               

               
Cow position:
               
chr27:14902410-14902661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 134
               

               
Conread position:
               
19-266
               

               
Cow position:
               
chr27:27064201-27064447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 53
               

               
Conread position:
               
20-156
               

               
Cow position:
               
chr27:427363-427226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 53
               

               
Conread position:
               
21-255
               

               
Cow position:
               
chr27:6500302-6500061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
41, 133
               

               
Conread position:
               
21-255
               

               
Cow position:
               
chr27:26440821-26441058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
21-283
               

               
Cow position:
               
chr27:11815522-11815787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
42, 103
               

               
Conread position:
               
22-305
               

               
Cow position:
               
chr27:25380227-25379948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
40, 115
               

               
Conread position:
               
23-244
               

               
Cow position:
               
chr27:25783837-25783620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
39, 53
               

               
Conread position:
               
23-283
               

               
Cow position:
               
chr27:12246895-12246635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
21, 25
               

               
Conread position:
               
24-372
               

               
Cow position:
               
chr27:26643907-26643570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 87
               

               
Conread position:
               
25-231
               

               
Cow position:
               
chr27:30792704-30792909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
109, 133
               

               
Conread position:
               
26-265
               

               
Cow position:
               
chr27:7934931-7935165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
36, 120
               

               
Conread position:
               
28-306
               

               
Cow position:
               
chr27:26864889-26865169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
29-283
               

               
Cow position:
               
chr27:27640760-27641025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
5, 127
               

               
Conread position:
               
31-281
               

               
Cow position:
               
chr27:23554096-23554352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
105, 28
               

               
Conread position:
               
31-298
               

               
Cow position:
               
chr27:20796011-20795755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 94
               

               
Conread position:
               
32-308
               

               
Cow position:
               
chr27:1353809-1353538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
140, 43
               

               
Conread position:
               
33-309
               

               
Cow position:
               
chr27:24321413-24321132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
103, 42
               

               
Conread position:
               
34-207
               

               
Cow position:
               
chr27:4835382-4835558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 121
               

               
Conread position:
               
34-234
               

               
Cow position:
               
chr27:2011879-2012078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
34-262
               

               
Cow position:
               
chr27:6058726-6058497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
100, 119
               

               
Conread position:
               
34-281
               

               
Cow position:
               
chr27:28001599-28001833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
147, 7
               

               
Conread position:
               
35-220
               

               
Cow position:
               
chr27:31216940-31217128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
27, 127
               

               
Conread position:
               
35-246
               

               
Cow position:
               
chr27:19543686-19543894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 99
               

               
Conread position:
               
35-259
               

               
Cow position:
               
chr27:30374347-30374574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 99
               

               
Conread position:
               
35-262
               

               
Cow position:
               
chr27:6523269-6523034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 120
               

               
Conread position:
               
35-263
               

               
Cow position:
               
chr27:29019523-29019757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 133
               

               
Conread position:
               
35-266
               

               
Cow position:
               
chr27:25676456-25676218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
35-277
               

               
Cow position:
               
chr27:12596980-12596746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
35-278
               

               
Cow position:
               
chr27:10307072-10307322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 123
               

               
Conread position:
               
35-278
               

               
Cow position:
               
chr27:19577897-19577653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
61, 53
               

               
Conread position:
               
35-284
               

               
Cow position:
               
chr27:30765255-30765013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
27, 98
               

               
Conread position:
               
36-254
               

               
Cow position:
               
chr27:22179575-22179788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
37-279
               

               
Cow position:
               
chr27:28038116-28038363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
26, 117
               

               
Conread position:
               
37-305
               

               
Cow position:
               
chr27:2592762-2592501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
144, 81
               

               
Conread position:
               
39-266
               

               
Cow position:
               
chr27:27259827-27259603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
143, 93
               

               
Conread position:
               
39-281
               

               
Cow position:
               
chr27:30354126-30354366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 33
               

               
Conread position:
               
41-263
               

               
Cow position:
               
chr27:707164-706946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
143, 79
               

               
Conread position:
               
41-270
               

               
Cow position:
               
chr27:22498770-22498545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
23, 93
               

               
Conread position:
               
42-246
               

               
Cow position:
               
chr27:21452854-21453062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
92, 111
               

               
Conread position:
               
42-310
               

               
Cow position:
               
chr27:20553933-20553677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 91
               

               
Conread position:
               
43-275
               

               
Cow position:
               
chr27:18558579-18558342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
20, 111
               

               
Conread position:
               
45-270
               

               
Cow position:
               
chr27:30359608-30359396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
47-209
               

               
Cow position:
               
chr27:26406832-26406992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 24
               

               
Conread position:
               
47-216
               

               
Cow position:
               
chr27:17926426-17926588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
134, 85
               

               
Conread position:
               
47-255
               

               
Cow position:
               
chr27:22771969-22771754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
47-282
               

               
Cow position:
               
chr27:28164200-28164429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
47-305
               

               
Cow position:
               
chr27:16871708-16871958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
49-318
               

               
Cow position:
               
chr27:15668558-15668835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
87, 94
               

               
Conread position:
               
51-263
               

               
Cow position:
               
chr27:25277342-25277136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
130, 7
               

               
Conread position:
               
52-278
               

               
Cow position:
               
chr27:27728519-27728298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
52-280
               

               
Cow position:
               
chr27:13252215-13251984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
84, 107
               

               
Conread position:
               
53-263
               

               
Cow position:
               
chr27:20354785-20354579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
9, 78
               

               
Conread position:
               
53-274
               

               
Cow position:
               
chr27:20552564-20552785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 115
               

               
Conread position:
               
54-275
               

               
Cow position:
               
chr27:29251084-29250862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 123
               

               
Conread position:
               
55-235
               

               
Cow position:
               
chr27:27055781-27055599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
8, 104
               

               
Conread position:
               
55-260
               

               
Cow position:
               
chr27:19685511-19685713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 79
               

               
Conread position:
               
56-277
               

               
Cow position:
               
chr27:27003079-27003293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 76
               

               
Conread position:
               
56-278
               

               
Cow position:
               
chr27:30915203-30914987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
124, 76
               

               
Conread position:
               
61-263
               

               
Cow position:
               
chr27:21569647-21569848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
132, 71
               

               
Conread position:
               
61-296
               

               
Cow position:
               
chr27:18030863-18031101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
61-307
               

               
Cow position:
               
chr27:30843882-30844122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 71
               

               
Conread position:
               
63-282
               

               
Cow position:
               
chr27:20592178-20591957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
117, 69
               

               
Conread position:
               
63-308
               

               
Cow position:
               
chr27:30670932-30670695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
118, 69
               

               
Conread position:
               
66-206
               

               
Cow position:
               
chr27:23558194-23558335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
67, 94
               

               
Conread position:
               
67-234
               

               
Cow position:
               
chr27:30989652-30989819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
67-269
               

               
Cow position:
               
chr27:30988989-30988785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
68-311
               

               
Cow position:
               
chr27:18739577-18739329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 128
               

               
Conread position:
               
75-266
               

               
Cow position:
               
chr27:27550565-27550750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 55
               

               
Conread position:
               
85-269
               

               
Cow position:
               
chr27:9169472-9169656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
86-311
               

               
Cow position:
               
chr27:13841548-13841321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
88-275
               

               
Cow position:
               
chr27:18434301-18434487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
35, 61
               

               
Conread position:
               
92-263
               

               
Cow position:
               
chr27:22268670-22268496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
44, 67
               

               
Conread position:
               
92-277
               

               
Cow position:
               
chr27:15643341-15643151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
42, 61
               

               
Conread position:
               
96-305
               

               
Cow position:
               
chr27:23891100-23890896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
5, 51
               
Show alignments to all cow chromosomes.