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Cow genome map

           
Conread name:
           
Ss1.1-rsto206_h24.5
        

               
Conread position:
               
1-104
               

               
Cow position:
               
chr4:68796352-68796456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-108
               

               
Cow position:
               
chr4:45499853-45499746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-117
               

               
Cow position:
               
chr4:17186828-17186713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 44
               

               
Conread position:
               
1-120
               

               
Cow position:
               
chr4:38706263-38706145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-121
               

               
Cow position:
               
chr4:48142472-48142593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-121
               

               
Cow position:
               
chr4:50194184-50194305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-122
               

               
Cow position:
               
chr4:54111248-54111365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-124
               

               
Cow position:
               
chr4:22906732-22906854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 40
               

               
Conread position:
               
1-125
               

               
Cow position:
               
chr4:3893422-3893545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-127
               

               
Cow position:
               
chr4:19308174-19308300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-129
               

               
Cow position:
               
chr4:46435140-46435269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-131
               

               
Cow position:
               
chr4:41999491-41999363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr4:16814078-16813949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr4:19502110-19501976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr4:48212781-48212652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 23
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr4:68362632-68362775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
1-142
               

               
Cow position:
               
chr4:38467307-38467449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr4:20644275-20644419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr4:33149527-33149677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr4:11917978-11917832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr4:35930121-35930270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr4:43884734-43884883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr4:47280433-47280282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr4:61721186-61721033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
33, 142
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr4:68429781-68429929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
133, 80
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr4:61450460-61450613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr4:1462973-1463130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr4:14754797-14754641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr4:26704479-26704324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 95
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr4:34223584-34223735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
59, 75
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr4:52979678-52979516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
133, 156
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr4:54171060-54171219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
133, 58
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr4:48409867-48409693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
52, 156
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr4:25354246-25354427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
61, 46
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr4:24371035-24370848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
24, 162
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr4:5577798-5577613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 55
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr4:19421026-19421210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
133, 26
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr4:11225784-11225595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 92
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr4:26009138-26009328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
71, 160
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr4:41897022-41896835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr4:49409157-49409348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr4:57988371-57988563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr4:61999760-61999576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr4:8692467-8692282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr4:49698287-49698483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 155
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr4:10553893-10554086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr4:41833570-41833384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
130, 32
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr4:47773940-47773755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
180, 152
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr4:63061557-63061365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 93
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr4:12657946-12658140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr4:60124086-60123893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 134
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr4:48204944-48204751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 133
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr4:42498224-42498423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr4:63251232-63251031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr4:20562308-20562510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
60, 152
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr4:42865657-42865860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr4:60677084-60676881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr4:5441011-5440806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 159
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr4:2244296-2244092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 99
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr4:69018060-69018266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr4:33372120-33371906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr4:10136234-10136445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr4:11930616-11930831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 123
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr4:25595838-25595624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 143
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr4:19256016-19256223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr4:48784668-48784886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr4:4736729-4736941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
38, 102
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr4:26469336-26469556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr4:41097613-41097828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 8
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr4:56409874-56410098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
52, 76
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr4:58283405-58283184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 108
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr4:9795679-9795458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
61, 146
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr4:13142832-13142628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr4:59056147-59055939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
199, 105
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr4:24671484-24671257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
61, 44
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr4:62471760-62471988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr4:19497555-19497335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr4:69406060-69406291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr4:59871197-59871407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
180, 32
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:4981665-4981905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:14742951-14743186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:17112186-17111953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
36, 133
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:23655686-23655921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 154
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:27466387-27466624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 163
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:37584218-37583981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:46176772-46176535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
61, 152
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:47264427-47264664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:49203976-49203745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:50802282-50802519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 158
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:50860367-50860130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 143
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr4:2263062-2262825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr4:18738094-18737856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr4:22010366-22010140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
61, 51
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr4:38584527-38584767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:52017158-52016919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
140, 166
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr4:6457087-6456846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr4:48485685-48485934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
61, 160
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:19597622-19597386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:23318884-23318642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:66918588-66918840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 211
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr4:11924700-11924460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 67
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr4:12237599-12237353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr4:16642464-16642706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 143
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr4:24432335-24432575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
39, 80
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr4:44734267-44734513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr4:60433171-60432924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 144
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr4:62157965-62158206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr4:65168313-65168073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr4:23573235-23573484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr4:27546451-27546705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr4:64875746-64876000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr4:8439751-8439495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr4:23303619-23303363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr4:26163281-26163030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 136
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr4:34713462-34713718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 158
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:359532-359790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
22, 154
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:2190652-2190395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:3070513-3070760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
133, 57
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:6034399-6034142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:8202941-8202683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:10044119-10043862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 161
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:10432433-10432695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:11919531-11919279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
184, 74
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:13979690-13979944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
109, 123
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:16364971-16365228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 161
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:17032851-17032594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:17282872-17282615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 153
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:17616388-17616644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:17877608-17877865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:17919095-17918838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 162
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:18106085-18105829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
133, 181
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:21064309-21064061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 24
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:21588915-21588656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 131
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:23610642-23610899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 143
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:26175551-26175299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:26874257-26874001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
61, 16
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:27178472-27178729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:29529168-29528912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:29811878-29811620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:30219988-30219731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:33069192-33068936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
61, 36
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:33935412-33935669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:36900023-36900280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:39006650-39006907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:39422245-39422502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:43063993-43064250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 152
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:43316006-43315750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
61, 141
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:43476176-43475926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:43895845-43895593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 154
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:46710956-46710700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 119
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:48030507-48030764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:50808187-50808444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:54571915-54571657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 144
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:56852592-56852847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
61, 24
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:61242909-61243168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:63266490-63266745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
61, 181
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:23451404-23451150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 146
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:66256378-66256632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 31
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr4:9136969-9137224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
61, 72
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr4:16339897-16339653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
241, 26
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr4:17200972-17201212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 46
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr4:19306948-19307206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
133, 160
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr4:21257434-21257181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr4:29813841-29813599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr4:60907602-60907343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 157
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr4:26323434-26323684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
135, 26
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr4:2562898-2563158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
60, 182
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr4:7806-7541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr4:61391508-61391256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
135, 23
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr4:17833213-17832958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
133, 171
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr4:19025721-19025462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr4:22073619-22073365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
27, 92
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr4:34171877-34171621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
61, 113
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr4:41441257-41441516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
63, 153
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr4:55271064-55270808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
135, 21
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr4:5984353-5984090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
58, 161
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr4:7964956-7964704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
113, 26
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr4:8133842-8133589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 101
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr4:8413418-8413167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr4:36840972-36841235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr4:37703958-37704217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
133, 112
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr4:37915637-37915387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
180, 97
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr4:53830124-53830388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
61, 160
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr4:68076836-68076578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
133, 112
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr4:5189302-5189055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 26
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr4:480315-480051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
61, 140
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr4:1060570-1060314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
61, 116
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr4:4672641-4672377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
61, 40
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr4:12003915-12004179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr4:22215964-22215701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
41, 87
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr4:26400649-26400916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 152
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr4:53208931-53209191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
133, 70
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr4:56514243-56513990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
61, 36
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr4:61271937-61271675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr4:65816000-65815751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 130
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr4:65919314-65919567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
180, 36
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr4:3388240-3388502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 79
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr4:25197805-25197540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
130, 152
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr4:40414939-40414675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
61, 120
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr4:45239968-45240227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
135, 26
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr4:561094-561355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
133, 23
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr4:14470876-14470615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
61, 70
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr4:46059049-46058797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 76
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr4:46383679-46383414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 105
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr4:47730563-47730810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
245, 20
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr4:54190799-54191044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
180, 32
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr4:68764209-68764477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
61, 100
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:604410-604140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 158
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:1915883-1915626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:2253840-2254108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:4277467-4277197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:7584763-7585033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:10123056-10123326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:11872220-11871954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:13834992-13835262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:14159432-14159169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 133
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:15862652-15862382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:16602361-16602096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:17752459-17752729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:18599751-18599481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:18975806-18975536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:20328020-20327754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:20666729-20666999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:23526383-23526652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 159
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:24140535-24140806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:27997375-27997640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
10, 118
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:28147580-28147312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:29569124-29568854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:30974029-30974297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 152
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:33554130-33553860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:35319495-35319225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:37553352-37553082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:37620195-37619928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 147
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:37707505-37707235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:46021240-46021510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:46526691-46526954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 133
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:46708835-46708568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:46737789-46737519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:47116951-47117221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:48894223-48894493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:54540693-54540963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:54962494-54962764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:56191515-56191245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:57493637-57493367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:61972783-61972504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
62, 46
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:63431121-63431391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 174
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:65198151-65197881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr4:509206-508948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr4:3687617-3687881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 146
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr4:10992507-10992238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr4:18489701-18489425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
35, 138
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr4:25879089-25879358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr4:27755613-27755340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr4:32260155-32259885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
61, 116
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr4:45589895-45589641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr4:45738787-45738519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
107, 26
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr4:49159081-49158830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr4:57555658-57555931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
61, 158
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr4:65406665-65406408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
61, 20
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr4:10055903-10056172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
61, 85
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr4:25972591-25972858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr4:7501578-7501830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
208, 64
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr4:43543042-43542772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
61, 152
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr4:9815657-9815383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr4:51850887-51851171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
61, 155
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr4:14919703-14919961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
194, 54
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr4:19561387-19561651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
61, 54
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr4:42672863-42673140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr4:11901868-11901594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr4:24119219-24118940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 151
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr4:63459523-63459241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
133, 152
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr4:68233673-68233934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
199, 44
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr4:11671146-11671423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr4:18335297-18335016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 167
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr4:19584396-19584686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr4:45105308-45105026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr4:53999828-53999540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 143
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr4:57240141-57240419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr4:57584536-57584276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
61, 99
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr4:3850249-3850522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 15
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr4:30574148-30574421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 131
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr4:12591519-12591243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 145
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr4:22086288-22086005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
63, 157
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr4:44782066-44782346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 130
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr4:285349-285616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
61, 44
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr4:351920-352208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr4:10905765-10905493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr4:11099973-11099696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
181, 79
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr4:14352989-14352699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr4:15904793-15905071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr4:19313697-19313983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
133, 152
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr4:23558178-23558465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 129
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr4:27276851-27276571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 139
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr4:28613513-28613794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr4:32827427-32827149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
133, 26
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr4:34209718-34210007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
61, 141
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr4:38799500-38799229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr4:48137606-48137883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 58
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr4:60371140-60370855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr4:60897581-60897303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 143
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr4:39009661-39009940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
57, 44
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr4:10412074-10412352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
180, 34
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr4:54501757-54501472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr4:275158-275439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
122, 15
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:42278541-42278227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr4:56233384-56233656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
181, 15
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:3170961-3171250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
61, 123
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:6265316-6265024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 19
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:6395738-6396029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:7080539-7080834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:13764245-13763954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:15500810-15500519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:16008867-16008576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:17091310-17091023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 125
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:21008585-21008296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:29312628-29312918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:38834464-38834173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:38864701-38864991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 181
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:40218468-40218755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:40664007-40663716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:42381662-42381371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:44029977-44029690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 94
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:44777541-44777250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:47114637-47114926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 123
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:47826072-47825781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:48411260-48410969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 272
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:59383815-59383522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
61, 123
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:59838950-59839241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:64156378-64156669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:66211848-66211557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr4:45613-45903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
133, 29
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr4:19434953-19435247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
180, 134
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr4:17124599-17124304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 120
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr4:51898694-51898999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
61, 162
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr4:27540313-27540605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
62, 143
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr4:63365682-63365382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr4:68387487-68387782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
132, 25
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr4:8947090-8947387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
47, 136
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr4:10916145-10915850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
130, 68
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr4:14152765-14153086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 199
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr4:24744723-24744415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
41, 116
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr4:33433564-33433265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
180, 36
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr4:36893048-36893350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr4:39231831-39231530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
62, 151
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr4:42424109-42423814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
129, 152
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr4:58248103-58248396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
24, 33
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr4:21058698-21058383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
15, 157
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr4:38952251-38952547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
125, 154
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr4:43148096-43148404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
61, 50
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr4:19096987-19097291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
180, 24
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr4:570488-570788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr4:7430014-7430322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
61, 21
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr4:12033959-12034263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr4:15635751-15635451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
57, 101
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr4:18255556-18255849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
180, 131
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr4:23060314-23059999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 156
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr4:25806591-25806896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
61, 160
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr4:44839193-44838895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
61, 149
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr4:47315029-47314732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
180, 52
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr4:47351499-47351800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 88
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr4:33421669-33421354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
133, 180
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr4:29035610-29035916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr4:34208620-34208940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
62, 153
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr4:10403978-10404298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr4:12426852-12426532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr4:14048074-14048392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr4:16765856-16765538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr4:18672874-18673192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 143
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr4:18684427-18684109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr4:21044514-21044196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr4:25865209-25865529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr4:28855760-28856078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr4:28864752-28864432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 155
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr4:29559879-29559561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr4:40229719-40230037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr4:42399567-42399249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr4:44700239-44699921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr4:45377109-45377427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 275
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr4:47056717-47057041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr4:60856373-60856697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr4:19265265-19265587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr4:66381556-66381225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 174
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr4:49176136-49176474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr4:63194933-63194556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
2-112
               

               
Cow position:
               
chr4:51023336-51023226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-173
               

               
Cow position:
               
chr4:38067576-38067748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
60, 150
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr4:9621-9444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
70, 43
               

               
Conread position:
               
2-194
               

               
Cow position:
               
chr4:18602564-18602371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
2-210
               

               
Cow position:
               
chr4:54757621-54757414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 76
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr4:20243823-20244044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 160
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr4:21246871-21246654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
60, 145
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr4:18974133-18974351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr4:41599009-41599248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
60, 152
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr4:18519421-18519664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr4:52771335-52771579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
60, 43
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr4:3354295-3354039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 150
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr4:21553489-21553234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
134, 151
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr4:67651781-67651527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
60, 44
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr4:65731234-65730973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
2-259
               

               
Cow position:
               
chr4:53545722-53545978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
59, 134
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr4:67444838-67445098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 80
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr4:45662807-45662555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
60, 128
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr4:56240153-56239901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
33, 142
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr4:21064726-21064990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 136
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr4:16859071-16858806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
132, 159
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr4:23647150-23646889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
60, 131
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr4:23853896-23854150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
26, 133
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr4:53832744-53833008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
132, 74
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr4:10731912-10732189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr4:25369812-25370083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr4:48961797-48961518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 148
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr4:61215305-61215028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
61, 128
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr4:6653433-6653696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
180, 56
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr4:43370157-43369879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr4:23554945-23555231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
60, 14
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr4:12464539-12464832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
71, 152
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr4:34166272-34165977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr4:30779142-30778818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
60, 151
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr4:46258174-46258500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 156
               

               
Conread position:
               
2-334
               

               
Cow position:
               
chr4:15618345-15618675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
60, 138
               

               
Conread position:
               
3-160
               

               
Cow position:
               
chr4:33090053-33089892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
3-200
               

               
Cow position:
               
chr4:46477244-46477047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
3-200
               

               
Cow position:
               
chr4:55508726-55508526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 151
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr4:7258733-7258508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
59, 141
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr4:14513543-14513312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr4:7249875-7249636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
60, 131
               

               
Conread position:
               
3-255
               

               
Cow position:
               
chr4:5610375-5610125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
131, 24
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr4:25906632-25906374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr4:22528693-22528426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
221, 130
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr4:22744023-22744279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
131, 19
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr4:37935587-37935324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
59, 147
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr4:51903296-51903570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr4:22236781-22236508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
76, 121
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr4:48152675-48152396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
59, 152
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr4:11025666-11025386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr4:45918727-45919010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr4:47502155-47502444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 180
               

               
Conread position:
               
3-305
               

               
Cow position:
               
chr4:11201514-11201811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
61, 24
               

               
Conread position:
               
3-305
               

               
Cow position:
               
chr4:66173100-66172805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
131, 27
               

               
Conread position:
               
4-153
               

               
Cow position:
               
chr4:20117153-20117006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
4-255
               

               
Cow position:
               
chr4:11187150-11187398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
43, 147
               

               
Conread position:
               
4-259
               

               
Cow position:
               
chr4:42232363-42232608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
106, 56
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr4:26399027-26399294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
58, 140
               

               
Conread position:
               
4-269
               

               
Cow position:
               
chr4:9444994-9444727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
58, 68
               

               
Conread position:
               
4-269
               

               
Cow position:
               
chr4:13668918-13668664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
165, 18
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr4:62317133-62317408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 269
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr4:21531937-21531677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
178, 18
               

               
Conread position:
               
4-305
               

               
Cow position:
               
chr4:24002274-24001974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
57, 105
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chr4:5777337-5776980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr4:33971200-33970974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
55, 138
               

               
Conread position:
               
6-253
               

               
Cow position:
               
chr4:52601753-52602005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
56, 148
               

               
Conread position:
               
6-255
               

               
Cow position:
               
chr4:3990925-3990677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
175, 65
               

               
Conread position:
               
6-259
               

               
Cow position:
               
chr4:68944479-68944221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
56, 148
               

               
Conread position:
               
6-277
               

               
Cow position:
               
chr4:54494537-54494790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
56, 10
               

               
Conread position:
               
6-311
               

               
Cow position:
               
chr4:22051771-22051474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
6-311
               

               
Cow position:
               
chr4:28836229-28836533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
120, 50
               

               
Conread position:
               
7-147
               

               
Cow position:
               
chr4:1499450-1499308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
7-195
               

               
Cow position:
               
chr4:38945743-38945932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
55, 126
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr4:13693974-13693749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
127, 40
               

               
Conread position:
               
7-255
               

               
Cow position:
               
chr4:46668271-46668513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
7-263
               

               
Cow position:
               
chr4:2422280-2422537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
55, 150
               

               
Conread position:
               
7-281
               

               
Cow position:
               
chr4:49424542-49424798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
7-284
               

               
Cow position:
               
chr4:23561073-23561358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 136
               

               
Conread position:
               
7-305
               

               
Cow position:
               
chr4:53100504-53100792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
7-311
               

               
Cow position:
               
chr4:22138537-22138225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
8-244
               

               
Cow position:
               
chr4:46274892-46275125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
54, 125
               

               
Conread position:
               
8-260
               

               
Cow position:
               
chr4:45644614-45644359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
64, 147
               

               
Conread position:
               
8-266
               

               
Cow position:
               
chr4:4487844-4488107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
54, 150
               

               
Conread position:
               
8-282
               

               
Cow position:
               
chr4:31023142-31023423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
8-287
               

               
Cow position:
               
chr4:52584683-52584383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
8-297
               

               
Cow position:
               
chr4:13271847-13272134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
64, 146
               

               
Conread position:
               
8-321
               

               
Cow position:
               
chr4:9876015-9875704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
54, 134
               

               
Conread position:
               
9-132
               

               
Cow position:
               
chr4:41186665-41186543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 18
               

               
Conread position:
               
9-192
               

               
Cow position:
               
chr4:28151229-28151411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
125, 153
               

               
Conread position:
               
9-205
               

               
Cow position:
               
chr4:22072973-22072776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
53, 145
               

               
Conread position:
               
9-269
               

               
Cow position:
               
chr4:20626-20878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
172, 42
               

               
Conread position:
               
9-282
               

               
Cow position:
               
chr4:637698-637971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
123, 134
               

               
Conread position:
               
9-289
               

               
Cow position:
               
chr4:59833640-59833929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 83
               

               
Conread position:
               
10-116
               

               
Cow position:
               
chr4:46069004-46069112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
10-221
               

               
Cow position:
               
chr4:48182416-48182629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
51, 87
               

               
Conread position:
               
10-227
               

               
Cow position:
               
chr4:32838819-32838598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
52, 72
               

               
Conread position:
               
10-255
               

               
Cow position:
               
chr4:2893726-2893973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
10-255
               

               
Cow position:
               
chr4:15872021-15871773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
124, 130
               

               
Conread position:
               
10-263
               

               
Cow position:
               
chr4:62772234-62771967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
52, 185
               

               
Conread position:
               
10-266
               

               
Cow position:
               
chr4:65891693-65891949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
120, 104
               

               
Conread position:
               
10-278
               

               
Cow position:
               
chr4:23311559-23311288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
121, 43
               

               
Conread position:
               
11-154
               

               
Cow position:
               
chr4:29114332-29114187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
11-306
               

               
Cow position:
               
chr4:19007740-19008038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 6
               

               
Conread position:
               
11-308
               

               
Cow position:
               
chr4:18095971-18095674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
123, 16
               

               
Conread position:
               
12-235
               

               
Cow position:
               
chr4:10703982-10703758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
52, 142
               

               
Conread position:
               
12-236
               

               
Cow position:
               
chr4:64072650-64072424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
12, 37
               

               
Conread position:
               
13-202
               

               
Cow position:
               
chr4:53134315-53134499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 118
               

               
Conread position:
               
13-222
               

               
Cow position:
               
chr4:33910010-33910212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
13-244
               

               
Cow position:
               
chr4:10024989-10025209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 59
               

               
Conread position:
               
13-266
               

               
Cow position:
               
chr4:19558428-19558676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
14-190
               

               
Cow position:
               
chr4:53763418-53763239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
11, 124
               

               
Conread position:
               
16-204
               

               
Cow position:
               
chr4:61304717-61304527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 146
               

               
Conread position:
               
16-232
               

               
Cow position:
               
chr4:19541827-19542058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
25, 144
               

               
Conread position:
               
16-235
               

               
Cow position:
               
chr4:533947-534169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 167
               

               
Conread position:
               
16-238
               

               
Cow position:
               
chr4:12018264-12018489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
46, 138
               

               
Conread position:
               
16-264
               

               
Cow position:
               
chr4:46060647-46060899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
22, 113
               

               
Conread position:
               
16-266
               

               
Cow position:
               
chr4:19141998-19142243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
16-269
               

               
Cow position:
               
chr4:2609945-2610191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
165, 55
               

               
Conread position:
               
16-269
               

               
Cow position:
               
chr4:23382098-23381850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
46, 34
               

               
Conread position:
               
16-283
               

               
Cow position:
               
chr4:27510978-27511236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
46, 121
               

               
Conread position:
               
16-302
               

               
Cow position:
               
chr4:66112371-66112081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
12, 139
               

               
Conread position:
               
16-311
               

               
Cow position:
               
chr4:43866144-43865857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
46, 118
               

               
Conread position:
               
17-203
               

               
Cow position:
               
chr4:40056675-40056863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
45, 127
               

               
Conread position:
               
17-229
               

               
Cow position:
               
chr4:10038989-10039202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 68
               

               
Conread position:
               
17-232
               

               
Cow position:
               
chr4:10036234-10036447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
18-259
               

               
Cow position:
               
chr4:16637889-16637653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
113, 128
               

               
Conread position:
               
18-268
               

               
Cow position:
               
chr4:10026197-10026440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 112
               

               
Conread position:
               
18-269
               

               
Cow position:
               
chr4:65116502-65116242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
113, 53
               

               
Conread position:
               
18-305
               

               
Cow position:
               
chr4:19582907-19582626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
46, 107
               

               
Conread position:
               
19-143
               

               
Cow position:
               
chr4:28399698-28399572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 75
               

               
Conread position:
               
19-236
               

               
Cow position:
               
chr4:620444-620225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
19-265
               

               
Cow position:
               
chr4:36730900-36731152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
43, 143
               

               
Conread position:
               
19-266
               

               
Cow position:
               
chr4:51727793-51728033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
42, 88
               

               
Conread position:
               
20-255
               

               
Cow position:
               
chr4:54468585-54468346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
42, 135
               

               
Conread position:
               
20-285
               

               
Cow position:
               
chr4:39128242-39128512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
21-253
               

               
Cow position:
               
chr4:4380236-4380473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 133
               

               
Conread position:
               
21-266
               

               
Cow position:
               
chr4:56570515-56570764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 134
               

               
Conread position:
               
21-305
               

               
Cow position:
               
chr4:37342829-37343118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
41, 133
               

               
Conread position:
               
22-205
               

               
Cow position:
               
chr4:17175880-17176063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 35
               

               
Conread position:
               
22-282
               

               
Cow position:
               
chr4:45775628-45775367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
109, 149
               

               
Conread position:
               
22-304
               

               
Cow position:
               
chr4:42480898-42481173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
26, 131
               

               
Conread position:
               
23-220
               

               
Cow position:
               
chr4:45511260-45511060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
111, 128
               

               
Conread position:
               
23-279
               

               
Cow position:
               
chr4:17474151-17474410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
25-200
               

               
Cow position:
               
chr4:4085420-4085245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 88
               

               
Conread position:
               
25-260
               

               
Cow position:
               
chr4:11193898-11194134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
37, 122
               

               
Conread position:
               
25-265
               

               
Cow position:
               
chr4:38999143-38999383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
109, 121
               

               
Conread position:
               
25-266
               

               
Cow position:
               
chr4:21392088-21391856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
156, 74
               

               
Conread position:
               
25-266
               

               
Cow position:
               
chr4:27292247-27291999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 97
               

               
Conread position:
               
25-282
               

               
Cow position:
               
chr4:1014783-1015039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
37, 127
               

               
Conread position:
               
25-286
               

               
Cow position:
               
chr4:53208017-53208268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
26-146
               

               
Cow position:
               
chr4:58424668-58424549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
27-278
               

               
Cow position:
               
chr4:30690442-30690685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
45, 106
               

               
Conread position:
               
27-305
               

               
Cow position:
               
chr4:16799474-16799195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
32, 39
               

               
Conread position:
               
28-269
               

               
Cow position:
               
chr4:11090967-11090739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
153, 104
               

               
Conread position:
               
28-269
               

               
Cow position:
               
chr4:54937605-54937849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
34, 126
               

               
Conread position:
               
29-266
               

               
Cow position:
               
chr4:4321286-4321043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
33, 125
               

               
Conread position:
               
29-269
               

               
Cow position:
               
chr4:41301270-41301029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
5, 15
               

               
Conread position:
               
29-295
               

               
Cow position:
               
chr4:17052876-17052612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
29-311
               

               
Cow position:
               
chr4:50203467-50203751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
33, 130
               

               
Conread position:
               
31-221
               

               
Cow position:
               
chr4:46550106-46550298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 123
               

               
Conread position:
               
33-317
               

               
Cow position:
               
chr4:8801227-8801520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
34-204
               

               
Cow position:
               
chr4:46385853-46385679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
28, 118
               

               
Conread position:
               
34-207
               

               
Cow position:
               
chr4:40576191-40576023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
147, 98
               

               
Conread position:
               
34-243
               

               
Cow position:
               
chr4:39455779-39455980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
34-262
               

               
Cow position:
               
chr4:25359330-25359563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 64
               

               
Conread position:
               
34-269
               

               
Cow position:
               
chr4:22849985-22849760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
34-273
               

               
Cow position:
               
chr4:67392695-67392923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
147, 93
               

               
Conread position:
               
34-287
               

               
Cow position:
               
chr4:21371125-21371364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
145, 48
               

               
Conread position:
               
34-287
               

               
Cow position:
               
chr4:52748733-52748481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
30, 99
               

               
Conread position:
               
34-305
               

               
Cow position:
               
chr4:5461128-5460870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
35-229
               

               
Cow position:
               
chr4:3251810-3251614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 117
               

               
Conread position:
               
35-255
               

               
Cow position:
               
chr4:5850606-5850382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 119
               

               
Conread position:
               
35-258
               

               
Cow position:
               
chr4:19542520-19542745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
14, 130
               

               
Conread position:
               
35-262
               

               
Cow position:
               
chr4:59106085-59105865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
27, 109
               

               
Conread position:
               
35-262
               

               
Cow position:
               
chr4:62570541-62570771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
27, 100
               

               
Conread position:
               
35-263
               

               
Cow position:
               
chr4:16239411-16239195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 101
               

               
Conread position:
               
35-266
               

               
Cow position:
               
chr4:22259692-22259469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 54
               

               
Conread position:
               
35-266
               

               
Cow position:
               
chr4:57931637-57931870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
147, 107
               

               
Conread position:
               
35-269
               

               
Cow position:
               
chr4:6630565-6630334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
27, 117
               

               
Conread position:
               
35-269
               

               
Cow position:
               
chr4:54930690-54930460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
35-274
               

               
Cow position:
               
chr4:22345289-22345058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 103
               

               
Conread position:
               
35-276
               

               
Cow position:
               
chr4:44612729-44612971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
145, 97
               

               
Conread position:
               
35-278
               

               
Cow position:
               
chr4:11021925-11021685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 111
               

               
Conread position:
               
35-282
               

               
Cow position:
               
chr4:51739977-51739738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
35-305
               

               
Cow position:
               
chr4:19438184-19438456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
28, 111
               

               
Conread position:
               
35-305
               

               
Cow position:
               
chr4:20139793-20139524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
99, 110
               

               
Conread position:
               
35-305
               

               
Cow position:
               
chr4:27529839-27530109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 126
               

               
Conread position:
               
35-305
               

               
Cow position:
               
chr4:28772341-28772076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 98
               

               
Conread position:
               
36-192
               

               
Cow position:
               
chr4:11175818-11175974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
145, 124
               

               
Conread position:
               
36-287
               

               
Cow position:
               
chr4:10968659-10968414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
12, 99
               

               
Conread position:
               
37-198
               

               
Cow position:
               
chr4:61969910-61969747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 115
               

               
Conread position:
               
37-233
               

               
Cow position:
               
chr4:52632241-52632043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 10
               

               
Conread position:
               
37-244
               

               
Cow position:
               
chr4:62567133-62567344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 116
               

               
Conread position:
               
37-266
               

               
Cow position:
               
chr4:58261425-58261196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
94, 124
               

               
Conread position:
               
37-269
               

               
Cow position:
               
chr4:44496112-44496330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
36, 94
               

               
Conread position:
               
37-269
               

               
Cow position:
               
chr4:47348560-47348787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
37-269
               

               
Cow position:
               
chr4:51783908-51784138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
25, 114
               

               
Conread position:
               
37-311
               

               
Cow position:
               
chr4:17660477-17660190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
25, 124
               

               
Conread position:
               
38-255
               

               
Cow position:
               
chr4:203419-203196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 118
               

               
Conread position:
               
38-263
               

               
Cow position:
               
chr4:20298998-20299227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 117
               

               
Conread position:
               
38-263
               

               
Cow position:
               
chr4:23509318-23509547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
38-266
               

               
Cow position:
               
chr4:3475359-3475584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 96
               

               
Conread position:
               
39-229
               

               
Cow position:
               
chr4:33623448-33623641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 94
               

               
Conread position:
               
40-190
               

               
Cow position:
               
chr4:22354670-22354826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
40-268
               

               
Cow position:
               
chr4:52225740-52225964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
32, 122
               

               
Conread position:
               
41-266
               

               
Cow position:
               
chr4:46597115-46597335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
140, 89
               

               
Conread position:
               
42-284
               

               
Cow position:
               
chr4:34630635-34630864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
203, 91
               

               
Conread position:
               
43-237
               

               
Cow position:
               
chr4:65826121-65825928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 118
               

               
Conread position:
               
43-263
               

               
Cow position:
               
chr4:54667957-54667734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
19, 122
               

               
Conread position:
               
43-269
               

               
Cow position:
               
chr4:43495636-43495862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
138, 90
               

               
Conread position:
               
43-276
               

               
Cow position:
               
chr4:46591396-46591632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
91, 29
               

               
Conread position:
               
44-266
               

               
Cow position:
               
chr4:52167108-52166896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
68, 28
               

               
Conread position:
               
44-298
               

               
Cow position:
               
chr4:33612628-33612367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 108
               

               
Conread position:
               
44-304
               

               
Cow position:
               
chr4:34641994-34641736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
44-305
               

               
Cow position:
               
chr4:35981724-35981987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 110
               

               
Conread position:
               
44-306
               

               
Cow position:
               
chr4:27664740-27665005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
19, 125
               

               
Conread position:
               
44-311
               

               
Cow position:
               
chr4:26746219-26746480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
28, 89
               

               
Conread position:
               
45-269
               

               
Cow position:
               
chr4:44025078-44024860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
46-251
               

               
Cow position:
               
chr4:26307763-26307557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
46-277
               

               
Cow position:
               
chr4:62983816-62983586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
46-278
               

               
Cow position:
               
chr4:43909489-43909712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 85
               

               
Conread position:
               
47-228
               

               
Cow position:
               
chr4:10471961-10472140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
47-253
               

               
Cow position:
               
chr4:31348456-31348245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 116
               

               
Conread position:
               
47-263
               

               
Cow position:
               
chr4:19316259-19316048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
199, 24
               

               
Conread position:
               
47-277
               

               
Cow position:
               
chr4:1237378-1237147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
47-278
               

               
Cow position:
               
chr4:23445313-23445080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
135, 48
               

               
Conread position:
               
47-282
               

               
Cow position:
               
chr4:55395506-55395734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 92
               

               
Conread position:
               
48-238
               

               
Cow position:
               
chr4:123462-123270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
48-254
               

               
Cow position:
               
chr4:34310716-34310505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
14, 106
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chr4:41867183-41867395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 102
               

               
Conread position:
               
48-281
               

               
Cow position:
               
chr4:51866733-51866966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 107
               

               
Conread position:
               
49-266
               

               
Cow position:
               
chr4:657079-656857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 96
               

               
Conread position:
               
49-303
               

               
Cow position:
               
chr4:3283709-3283459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 106
               

               
Conread position:
               
50-203
               

               
Cow position:
               
chr4:51630398-51630555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 104
               

               
Conread position:
               
50-236
               

               
Cow position:
               
chr4:2536574-2536756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
50-269
               

               
Cow position:
               
chr4:13255836-13256048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
50-278
               

               
Cow position:
               
chr4:35940270-35940037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
81, 108
               

               
Conread position:
               
51-277
               

               
Cow position:
               
chr4:31004662-31004439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
128, 82
               

               
Conread position:
               
52-265
               

               
Cow position:
               
chr4:45583385-45583164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 217
               

               
Conread position:
               
52-276
               

               
Cow position:
               
chr4:45367479-45367703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
52-283
               

               
Cow position:
               
chr4:59008626-59008397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
53-287
               

               
Cow position:
               
chr4:5630009-5629774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 81
               

               
Conread position:
               
54-326
               

               
Cow position:
               
chr4:49089539-49089801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
8, 89
               

               
Conread position:
               
55-243
               

               
Cow position:
               
chr4:26549209-26549391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 78
               

               
Conread position:
               
55-263
               

               
Cow position:
               
chr4:40410374-40410173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 73
               

               
Conread position:
               
55-305
               

               
Cow position:
               
chr4:54455597-54455351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
79, 88
               

               
Conread position:
               
55-350
               

               
Cow position:
               
chr4:42922100-42921815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
7, 78
               

               
Conread position:
               
57-261
               

               
Cow position:
               
chr4:18577029-18576822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
5, 88
               

               
Conread position:
               
60-278
               

               
Cow position:
               
chr4:29291274-29291487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
74, 62
               

               
Conread position:
               
61-281
               

               
Cow position:
               
chr4:19322326-19322108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
120, 71
               

               
Conread position:
               
61-288
               

               
Cow position:
               
chr4:21233118-21232894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
120, 63
               

               
Conread position:
               
62-270
               

               
Cow position:
               
chr4:11897545-11897337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
71, 95
               

               
Conread position:
               
62-303
               

               
Cow position:
               
chr4:58881213-58880973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
72, 89
               

               
Conread position:
               
63-269
               

               
Cow position:
               
chr4:46370565-46370775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 80
               

               
Conread position:
               
64-283
               

               
Cow position:
               
chr4:65431901-65432122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 56
               

               
Conread position:
               
66-255
               

               
Cow position:
               
chr4:16091642-16091453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 87
               

               
Conread position:
               
68-283
               

               
Cow position:
               
chr4:27687684-27687897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
114, 8
               

               
Conread position:
               
71-255
               

               
Cow position:
               
chr4:23911826-23911637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 30
               

               
Conread position:
               
75-236
               

               
Cow position:
               
chr4:41908025-41907867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 67
               

               
Conread position:
               
75-290
               

               
Cow position:
               
chr4:19463257-19463476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
76-255
               

               
Cow position:
               
chr4:43750044-43749862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 77
               

               
Conread position:
               
82-266
               

               
Cow position:
               
chr4:10016828-10016644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 159
               

               
Conread position:
               
83-269
               

               
Cow position:
               
chr4:34924918-34924731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
48, 60
               

               
Conread position:
               
91-269
               

               
Cow position:
               
chr4:36724825-36724998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
91, 43
               

               
Conread position:
               
92-307
               

               
Cow position:
               
chr4:38935142-38935353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
101-278
               

               
Cow position:
               
chr4:36929106-36929286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
35, 60
               
Show alignments to all cow chromosomes.