Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rsto212_a18.5
        

               Conread position:
               1-141
               

               Cow position:
               chr12:3600200-3600052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               1-145
               

               Cow position:
               chr12:3160760-3160916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr12:29119594-29119751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-161
               

               Cow position:
               chr12:29762903-29762731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               53, 154
               

               Conread position:
               1-177
               

               Cow position:
               chr12:37123209-37123390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               31, 146
               

               Conread position:
               1-186
               

               Cow position:
               chr12:5134835-5135033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               36, 162
               

               Conread position:
               1-186
               

               Cow position:
               chr12:43783444-43783269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 71
               

               Conread position:
               1-198
               

               Cow position:
               chr12:19420236-19420029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1-201
               

               Cow position:
               chr12:15231985-15232191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               56, 97
               

               Conread position:
               1-209
               

               Cow position:
               chr12:42061375-42061596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-211
               

               Cow position:
               chr12:46143517-46143739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               1-212
               

               Cow position:
               chr12:3568643-3568861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               36, 16
               

               Conread position:
               1-215
               

               Cow position:
               chr12:19872134-19872346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 88
               

               Conread position:
               1-215
               

               Cow position:
               chr12:25619681-25619454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr12:32786295-32786079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               36, 74
               

               Conread position:
               1-215
               

               Cow position:
               chr12:35218708-35218485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               57, 114
               

               Conread position:
               1-215
               

               Cow position:
               chr12:41979603-41979379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               36, 154
               

               Conread position:
               1-222
               

               Cow position:
               chr12:44014144-44013910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               26, 176
               

               Conread position:
               1-225
               

               Cow position:
               chr12:9414070-9413853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               191, 26
               

               Conread position:
               1-229
               

               Cow position:
               chr12:17472524-17472293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               31, 100
               

               Conread position:
               1-261
               

               Cow position:
               chr12:44766779-44767037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 113
               

               Conread position:
               1-275
               

               Cow position:
               chr12:38041058-38040783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               37, 74
               

               Conread position:
               1-276
               

               Cow position:
               chr12:24440508-24440791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               37, 74
               

               Conread position:
               1-276
               

               Cow position:
               chr12:25455810-25456095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               36, 218
               

               Conread position:
               1-276
               

               Cow position:
               chr12:28572399-28572663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               58, 104
               

               Conread position:
               1-289
               

               Cow position:
               chr12:4116201-4116478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-316
               

               Cow position:
               chr12:941327-941657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               1-326
               

               Cow position:
               chr12:20326467-20326801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               31, 45
               

               Conread position:
               1-357
               

               Cow position:
               chr12:18769380-18769012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               251
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               22, 176
               

               Conread position:
               1-358
               

               Cow position:
               chr12:5273423-5273061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 216
               

               Conread position:
               1-363
               

               Cow position:
               chr12:29995766-29995400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 160
               

               Conread position:
               1-363
               

               Cow position:
               chr12:44905333-44905691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               56, 204
               

               Conread position:
               1-364
               

               Cow position:
               chr12:17716783-17717127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               256
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               58, 27
               

               Conread position:
               1-365
               

               Cow position:
               chr12:12304097-12304446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 91
               

               Conread position:
               1-366
               

               Cow position:
               chr12:6489280-6488926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               58, 76
               

               Conread position:
               1-372
               

               Cow position:
               chr12:19869167-19869533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               31, 107
               

               Conread position:
               1-373
               

               Cow position:
               chr12:45814568-45814188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 230
               

               Conread position:
               1-377
               

               Cow position:
               chr12:30437947-30438314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               257
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               58, 82
               

               Conread position:
               1-378
               

               Cow position:
               chr12:6210461-6210078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 156
               

               Conread position:
               1-378
               

               Cow position:
               chr12:18943954-18943579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 113
               

               Conread position:
               1-386
               

               Cow position:
               chr12:7977743-7978124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 73
               

               Conread position:
               1-387
               

               Cow position:
               chr12:47928910-47929288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               36, 197
               

               Conread position:
               1-389
               

               Cow position:
               chr12:15173515-15173913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               272
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               146, 58
               

               Conread position:
               1-394
               

               Cow position:
               chr12:2286277-2286676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               36, 126
               

               Conread position:
               1-397
               

               Cow position:
               chr12:2812923-2813324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               267
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               60, 33
               

               Conread position:
               1-397
               

               Cow position:
               chr12:6720018-6720425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               55, 30
               

               Conread position:
               1-397
               

               Cow position:
               chr12:31959589-31959977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               281
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               36, 122
               

               Conread position:
               1-402
               

               Cow position:
               chr12:1773967-1773558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 116
               

               Conread position:
               1-403
               

               Cow position:
               chr12:16543872-16543474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               56, 102
               

               Conread position:
               1-425
               

               Cow position:
               chr12:33323802-33323371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 158
               

               Conread position:
               1-445
               

               Cow position:
               chr12:18076230-18076655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               299
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               36, 111
               

               Conread position:
               1-448
               

               Cow position:
               chr12:19865938-19866390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 42
               

               Conread position:
               1-451
               

               Cow position:
               chr12:15122038-15122474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 98
               

               Conread position:
               1-453
               

               Cow position:
               chr12:9143088-9143535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 162
               

               Conread position:
               1-457
               

               Cow position:
               chr12:48415815-48415365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 36
               

               Conread position:
               1-459
               

               Cow position:
               chr12:11056572-11057023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 164
               

               Conread position:
               1-459
               

               Cow position:
               chr12:18421230-18420764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 158
               

               Conread position:
               1-459
               

               Cow position:
               chr12:36012912-36012455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               323
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               55, 105
               

               Conread position:
               1-463
               

               Cow position:
               chr12:4342025-4341574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 119
               

               Conread position:
               1-463
               

               Cow position:
               chr12:7960867-7960426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 69
               

               Conread position:
               1-463
               

               Cow position:
               chr12:15429904-15429436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 165
               

               Conread position:
               1-463
               

               Cow position:
               chr12:17079954-17080427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               307
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               31, 162
               

               Conread position:
               1-463
               

               Cow position:
               chr12:17881568-17882016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 91
               

               Conread position:
               1-463
               

               Cow position:
               chr12:18518367-18518833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 90
               

               Conread position:
               1-463
               

               Cow position:
               chr12:25259805-25259323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               300
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               36, 280
               

               Conread position:
               1-463
               

               Cow position:
               chr12:30578763-30578296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               317
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               39, 236
               

               Conread position:
               1-463
               

               Cow position:
               chr12:30590473-30590930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 159
               

               Conread position:
               1-463
               

               Cow position:
               chr12:35310977-35310521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 143
               

               Conread position:
               1-463
               

               Cow position:
               chr12:39486126-39486591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 164
               

               Conread position:
               1-463
               

               Cow position:
               chr12:41159293-41159742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 149
               

               Conread position:
               1-465
               

               Cow position:
               chr12:12199209-12198745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               316
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               56, 224
               

               Conread position:
               1-467
               

               Cow position:
               chr12:10895852-10895389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 148
               

               Conread position:
               1-471
               

               Cow position:
               chr12:17031317-17031780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 80
               

               Conread position:
               1-471
               

               Cow position:
               chr12:27563681-27563210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 36
               

               Conread position:
               1-473
               

               Cow position:
               chr12:26869100-26868643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 177
               

               Conread position:
               1-474
               

               Cow position:
               chr12:16359570-16360042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 196
               

               Conread position:
               1-477
               

               Cow position:
               chr12:31228275-31228757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 18
               

               Conread position:
               1-477
               

               Cow position:
               chr12:31529988-31530476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 59
               

               Conread position:
               1-478
               

               Cow position:
               chr12:25561067-25561544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 20
               

               Conread position:
               1-478
               

               Cow position:
               chr12:30745409-30745894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 163
               

               Conread position:
               1-478
               

               Cow position:
               chr12:31060287-31059803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               318
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               27, 152
               

               Conread position:
               1-480
               

               Cow position:
               chr12:21922132-21922615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               506
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 254
               

               Conread position:
               1-480
               

               Cow position:
               chr12:26782577-26783051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 206
               

               Conread position:
               1-480
               

               Cow position:
               chr12:34385818-34385352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 113
               

               Conread position:
               1-480
               

               Cow position:
               chr12:40910594-40910107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 159
               

               Conread position:
               2-191
               

               Cow position:
               chr12:46635248-46635051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               2-196
               

               Cow position:
               chr12:36954678-36954476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               2-202
               

               Cow position:
               chr12:6687566-6687766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               31, 107
               

               Conread position:
               2-211
               

               Cow position:
               chr12:30596160-30596384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               2-229
               

               Cow position:
               chr12:11583101-11583328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               37, 10
               

               Conread position:
               2-237
               

               Cow position:
               chr12:24032703-24032946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               34, 119
               

               Conread position:
               2-275
               

               Cow position:
               chr12:18937082-18937381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               2-394
               

               Cow position:
               chr12:32714737-32715141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               281
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               6, 159
               

               Conread position:
               2-406
               

               Cow position:
               chr12:19691540-19691127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 161
               

               Conread position:
               2-412
               

               Cow position:
               chr12:33457845-33458259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 100
               

               Conread position:
               2-424
               

               Cow position:
               chr12:42254355-42254791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 251
               

               Conread position:
               2-441
               

               Cow position:
               chr12:4866513-4866953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 34
               

               Conread position:
               2-459
               

               Cow position:
               chr12:27563136-27562682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               313
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               62, 25
               

               Conread position:
               2-459
               

               Cow position:
               chr12:41083763-41084202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               316
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               34, 44
               

               Conread position:
               2-462
               

               Cow position:
               chr12:19697115-19697554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               317
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               61, 35
               

               Conread position:
               2-462
               

               Cow position:
               chr12:30805552-30806013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 99
               

               Conread position:
               2-463
               

               Cow position:
               chr12:6411031-6410575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 119
               

               Conread position:
               2-463
               

               Cow position:
               chr12:7205907-7205465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               314
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               57, 105
               

               Conread position:
               2-463
               

               Cow position:
               chr12:7884960-7884519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 63
               

               Conread position:
               2-463
               

               Cow position:
               chr12:20479615-20479183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               319
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               62, 34
               

               Conread position:
               2-473
               

               Cow position:
               chr12:36501252-36500776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 26
               

               Conread position:
               2-479
               

               Cow position:
               chr12:30728545-30728066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               326
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               10, 182
               

               Conread position:
               3-184
               

               Cow position:
               chr12:4593793-4593990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 167
               

               Conread position:
               3-376
               

               Cow position:
               chr12:21486292-21486653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               264
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               30, 62
               

               Conread position:
               3-378
               

               Cow position:
               chr12:44596116-44595731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               28, 21
               

               Conread position:
               3-477
               

               Cow position:
               chr12:34473915-34473433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               329
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               31, 14
               

               Conread position:
               4-173
               

               Cow position:
               chr12:7108887-7109066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               4-186
               

               Cow position:
               chr12:40307395-40307586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               33, 156
               

               Conread position:
               4-222
               

               Cow position:
               chr12:12017575-12017804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               4-234
               

               Cow position:
               chr12:42167345-42167586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               55, 133
               

               Conread position:
               4-237
               

               Cow position:
               chr12:9465761-9465521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 197
               

               Conread position:
               4-237
               

               Cow position:
               chr12:22261115-22260883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 88
               

               Conread position:
               4-242
               

               Cow position:
               chr12:2805343-2805103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               70, 152
               

               Conread position:
               4-266
               

               Cow position:
               chr12:34274163-34274430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               34, 232
               

               Conread position:
               4-272
               

               Cow position:
               chr12:2669976-2670238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               35, 55
               

               Conread position:
               4-276
               

               Cow position:
               chr12:28650656-28650933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               41, 33
               

               Conread position:
               4-284
               

               Cow position:
               chr12:3578981-3579270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               52, 33
               

               Conread position:
               4-284
               

               Cow position:
               chr12:29411785-29411505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               55, 23
               

               Conread position:
               4-344
               

               Cow position:
               chr12:6136881-6136538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               226
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               33, 221
               

               Conread position:
               4-363
               

               Cow position:
               chr12:8869183-8868818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 13
               

               Conread position:
               4-372
               

               Cow position:
               chr12:2711191-2711571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 240
               

               Conread position:
               4-373
               

               Cow position:
               chr12:29484192-29483812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               263
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               28, 120
               

               Conread position:
               4-374
               

               Cow position:
               chr12:47803854-47804231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               46, 151
               

               Conread position:
               4-375
               

               Cow position:
               chr12:24559051-24559434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               24, 178
               

               Conread position:
               4-375
               

               Cow position:
               chr12:40807095-40807480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               257
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               34, 196
               

               Conread position:
               4-377
               

               Cow position:
               chr12:9229783-9229422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               270
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               32, 146
               

               Conread position:
               4-378
               

               Cow position:
               chr12:44518040-44517659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 176
               

               Conread position:
               4-386
               

               Cow position:
               chr12:3196952-3197355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               275
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               29, 246
               

               Conread position:
               4-394
               

               Cow position:
               chr12:5800737-5801136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 33
               

               Conread position:
               4-394
               

               Cow position:
               chr12:45160813-45160425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               28, 183
               

               Conread position:
               4-397
               

               Cow position:
               chr12:18572337-18572722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               275
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               24, 176
               

               Conread position:
               4-397
               

               Cow position:
               chr12:45820658-45820268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 152
               

               Conread position:
               4-424
               

               Cow position:
               chr12:7000890-7000482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 34
               

               Conread position:
               4-457
               

               Cow position:
               chr12:37994026-37993566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 157
               

               Conread position:
               4-463
               

               Cow position:
               chr12:6241008-6241485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 158
               

               Conread position:
               4-463
               

               Cow position:
               chr12:6960140-6960611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               311
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               29, 246
               

               Conread position:
               4-463
               

               Cow position:
               chr12:9482596-9482141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 24
               

               Conread position:
               4-463
               

               Cow position:
               chr12:43788729-43789187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               324
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               34, 186
               

               Conread position:
               4-473
               

               Cow position:
               chr12:8943521-8943047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 216
               

               Conread position:
               4-473
               

               Cow position:
               chr12:18020551-18021054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 150
               

               Conread position:
               4-473
               

               Cow position:
               chr12:30170366-30170822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 152
               

               Conread position:
               4-473
               

               Cow position:
               chr12:42966700-42967166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 150
               

               Conread position:
               4-477
               

               Cow position:
               chr12:3076924-3076442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 212
               

               Conread position:
               4-478
               

               Cow position:
               chr12:27803350-27802880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               325
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               53, 148
               

               Conread position:
               4-479
               

               Cow position:
               chr12:19508873-19508388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 225
               

               Conread position:
               4-479
               

               Cow position:
               chr12:36118668-36119145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 196
               

               Conread position:
               4-480
               

               Cow position:
               chr12:15938568-15938092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 87
               

               Conread position:
               4-480
               

               Cow position:
               chr12:42160854-42160379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 24
               

               Conread position:
               5-163
               

               Cow position:
               chr12:17486437-17486270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               27, 144
               

               Conread position:
               5-165
               

               Cow position:
               chr12:26777452-26777287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               52, 108
               

               Conread position:
               5-173
               

               Cow position:
               chr12:17495492-17495316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               5-183
               

               Cow position:
               chr12:7882021-7881831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               5-185
               

               Cow position:
               chr12:26527087-26527268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               79, 139
               

               Conread position:
               5-198
               

               Cow position:
               chr12:31925350-31925549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               27, 172
               

               Conread position:
               5-209
               

               Cow position:
               chr12:3880557-3880339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               27, 156
               

               Conread position:
               5-215
               

               Cow position:
               chr12:24755324-24755115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               30, 143
               

               Conread position:
               5-217
               

               Cow position:
               chr12:6226931-6226729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               82, 22
               

               Conread position:
               5-290
               

               Cow position:
               chr12:1444048-1443751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               33, 234
               

               Conread position:
               5-338
               

               Cow position:
               chr12:34673629-34673301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               81, 53
               

               Conread position:
               5-373
               

               Cow position:
               chr12:29969279-29969653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               254
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               55, 26
               

               Conread position:
               5-377
               

               Cow position:
               chr12:46333073-46333422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               79, 23
               

               Conread position:
               5-378
               

               Cow position:
               chr12:30605456-30605087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               271
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               29, 157
               

               Conread position:
               5-379
               

               Cow position:
               chr12:17000958-17001338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               29, 157
               

               Conread position:
               5-460
               

               Cow position:
               chr12:19125127-19124676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               313
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               27, 132
               

               Conread position:
               5-463
               

               Cow position:
               chr12:30919136-30919595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 23
               

               Conread position:
               5-463
               

               Cow position:
               chr12:34466297-34465857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               323
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               58, 18
               

               Conread position:
               5-463
               

               Cow position:
               chr12:35771333-35770863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 202
               

               Conread position:
               5-463
               

               Cow position:
               chr12:42181441-42180966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 135
               

               Conread position:
               5-463
               

               Cow position:
               chr12:44622059-44622521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 86
               

               Conread position:
               5-471
               

               Cow position:
               chr12:22516036-22515568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 139
               

               Conread position:
               5-474
               

               Cow position:
               chr12:4370933-4371418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 120
               

               Conread position:
               5-476
               

               Cow position:
               chr12:7147378-7147885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               509
               

               Alignm identity:
               331
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               35, 235
               

               Conread position:
               5-480
               

               Cow position:
               chr12:42602536-42602056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 23
               

               Conread position:
               6-215
               

               Cow position:
               chr12:19039910-19039690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               6-328
               

               Cow position:
               chr12:3055837-3056161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               26, 149
               

               Conread position:
               6-464
               

               Cow position:
               chr12:6469342-6468912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               312
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               50, 88
               

               Conread position:
               6-477
               

               Cow position:
               chr12:18123388-18123844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 154
               

               Conread position:
               6-479
               

               Cow position:
               chr12:35368344-35368819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 105
               

               Conread position:
               7-231
               

               Cow position:
               chr12:40158537-40158303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               7-240
               

               Cow position:
               chr12:7919769-7919985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-277
               

               Cow position:
               chr12:3070812-3071086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               31, 86
               

               Conread position:
               7-441
               

               Cow position:
               chr12:5632172-5631745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 101
               

               Conread position:
               7-450
               

               Cow position:
               chr12:17270245-17270685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 86
               

               Conread position:
               7-459
               

               Cow position:
               chr12:34007001-34007456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               313
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               30, 232
               

               Conread position:
               7-463
               

               Cow position:
               chr12:9710502-9710044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 80
               

               Conread position:
               7-468
               

               Cow position:
               chr12:18577552-18577993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 117
               

               Conread position:
               7-468
               

               Cow position:
               chr12:21314724-21315183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               306
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               21, 176
               

               Conread position:
               7-472
               

               Cow position:
               chr12:22881754-22882223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 77
               

               Conread position:
               8-186
               

               Cow position:
               chr12:25805407-25805222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               36, 150
               

               Conread position:
               8-222
               

               Cow position:
               chr12:29694334-29694120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               138, 62
               

               Conread position:
               8-226
               

               Cow position:
               chr12:3510268-3510493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               56, 36
               

               Conread position:
               8-315
               

               Cow position:
               chr12:26317162-26317481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               23, 86
               

               Conread position:
               8-373
               

               Cow position:
               chr12:19715324-19714966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               49, 85
               

               Conread position:
               8-397
               

               Cow position:
               chr12:41580820-41581209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 218
               

               Conread position:
               8-428
               

               Cow position:
               chr12:4008580-4008154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               296
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               29, 154
               

               Conread position:
               8-458
               

               Cow position:
               chr12:30753430-30753875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 106
               

               Conread position:
               8-463
               

               Cow position:
               chr12:5714332-5714779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 147
               

               Conread position:
               8-463
               

               Cow position:
               chr12:11835945-11836389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 67
               

               Conread position:
               8-463
               

               Cow position:
               chr12:41216762-41217229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 201
               

               Conread position:
               9-239
               

               Cow position:
               chr12:18081839-18081606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               28, 95
               

               Conread position:
               9-282
               

               Cow position:
               chr12:3039218-3039491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               23, 66
               

               Conread position:
               9-445
               

               Cow position:
               chr12:41091233-41091678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               303
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               28, 197
               

               Conread position:
               9-463
               

               Cow position:
               chr12:20777225-20776768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 28
               

               Conread position:
               10-374
               

               Cow position:
               chr12:28582787-28582434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               27, 80
               

               Conread position:
               10-408
               

               Cow position:
               chr12:9914494-9914900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 93
               

               Conread position:
               10-451
               

               Cow position:
               chr12:31532696-31532260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 30
               

               Conread position:
               10-479
               

               Cow position:
               chr12:18040887-18040428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               318
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               22, 95
               

               Conread position:
               11-222
               

               Cow position:
               chr12:31841144-31841368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               11-265
               

               Cow position:
               chr12:32391551-32391813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               27, 154
               

               Conread position:
               11-394
               

               Cow position:
               chr12:3950645-3950251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 232
               

               Conread position:
               12-144
               

               Cow position:
               chr12:25529737-25529881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               12-314
               

               Cow position:
               chr12:6164322-6164007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               20, 150
               

               Conread position:
               12-374
               

               Cow position:
               chr12:46314988-46314629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               28, 81
               

               Conread position:
               12-381
               

               Cow position:
               chr12:27055315-27055687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               24, 146
               

               Conread position:
               12-394
               

               Cow position:
               chr12:41473802-41474184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 89
               

               Conread position:
               13-392
               

               Cow position:
               chr12:11109478-11109847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               275
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               46, 103
               

               Conread position:
               14-470
               

               Cow position:
               chr12:32169245-32169714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 7
               

               Conread position:
               15-212
               

               Cow position:
               chr12:4134375-4134587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               15-275
               

               Cow position:
               chr12:12031117-12030853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               11, 25
               

               Conread position:
               15-473
               

               Cow position:
               chr12:15358038-15358516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 210
               

               Conread position:
               15-473
               

               Cow position:
               chr12:36020766-36020310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               317
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               22, 90
               

               Conread position:
               16-275
               

               Cow position:
               chr12:22047180-22047445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               5, 162
               

               Conread position:
               16-364
               

               Cow position:
               chr12:40110100-40110437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               247
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               18-191
               

               Cow position:
               chr12:23154753-23154569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               42, 173
               

               Conread position:
               18-319
               

               Cow position:
               chr12:12178634-12178943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               23, 142
               

               Conread position:
               18-394
               

               Cow position:
               chr12:37733064-37732681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               16, 61
               

               Conread position:
               18-439
               

               Cow position:
               chr12:43476068-43476486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               294
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               18, 162
               

               Conread position:
               18-474
               

               Cow position:
               chr12:37727860-37728301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               312
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               14, 61
               

               Conread position:
               20-279
               

               Cow position:
               chr12:41214603-41214342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               26, 134
               

               Conread position:
               20-463
               

               Cow position:
               chr12:3473275-3472833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               303
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               12, 164
               

               Conread position:
               20-475
               

               Cow position:
               chr12:22285385-22284950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               318
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               39, 80
               

               Conread position:
               21-276
               

               Cow position:
               chr12:8922073-8921810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               12, 161
               

               Conread position:
               21-344
               

               Cow position:
               chr12:40008627-40008954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 200
               

               Conread position:
               21-462
               

               Cow position:
               chr12:19502704-19502254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 141
               

               Conread position:
               21-478
               

               Cow position:
               chr12:18388566-18388111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 135
               

               Conread position:
               22-374
               

               Cow position:
               chr12:31429843-31429496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               68, 42
               

               Conread position:
               24-394
               

               Cow position:
               chr12:25320642-25321007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               264
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               13, 91
               

               Conread position:
               25-463
               

               Cow position:
               chr12:34161143-34161564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               297
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               12, 90
               

               Conread position:
               27-480
               

               Cow position:
               chr12:15783656-15784101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               302
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               32, 63
               

               Conread position:
               28-471
               

               Cow position:
               chr12:17625094-17624665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               293
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               35, 57
               

               Conread position:
               29-217
               

               Cow position:
               chr12:24107806-24107624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               5, 19
               

               Conread position:
               29-459
               

               Cow position:
               chr12:42879431-42879856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 45
               

               Conread position:
               30-473
               

               Cow position:
               chr12:29899703-29899247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               309
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               57, 34
               

               Conread position:
               31-428
               

               Cow position:
               chr12:43942207-43942598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 74
               

               Conread position:
               31-431
               

               Cow position:
               chr12:30662223-30661820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 193
               

               Conread position:
               31-473
               

               Cow position:
               chr12:39465305-39465736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 130
               

               Conread position:
               32-392
               

               Cow position:
               chr12:28257318-28256962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               55, 32
               

               Conread position:
               32-466
               

               Cow position:
               chr12:34332834-34333280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               297
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               30, 52
               

               Conread position:
               34-382
               

               Cow position:
               chr12:12331771-12331426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 66
               

               Conread position:
               36-265
               

               Cow position:
               chr12:17702501-17702261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               23, 132
               

               Conread position:
               37-463
               

               Cow position:
               chr12:9767132-9766720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               282
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               46, 14
               

               Conread position:
               41-480
               

               Cow position:
               chr12:3994686-3995110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               294
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               20, 114
               

               Conread position:
               42-222
               

               Cow position:
               chr12:29162073-29161889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               15, 65
               

               Conread position:
               51-463
               

               Cow position:
               chr12:1889828-1889419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               12, 93
               

               Conread position:
               56-213
               

               Cow position:
               chr12:24180655-24180813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 45
               

               Conread position:
               57-216
               

               Cow position:
               chr12:15240965-15240803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               30, 92
               

               Conread position:
               57-371
               

               Cow position:
               chr12:5940102-5940413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               30, 174
               

               Conread position:
               57-373
               

               Cow position:
               chr12:24211175-24211481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               30, 97
               

               Conread position:
               57-393
               

               Cow position:
               chr12:28471398-28471741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               34, 51
               

               Conread position:
               57-459
               

               Cow position:
               chr12:5635689-5635295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 96
               

               Conread position:
               57-473
               

               Cow position:
               chr12:42283078-42282666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 165
               

               Conread position:
               57-474
               

               Cow position:
               chr12:21393464-21393882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               287
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               33, 65
               

               Conread position:
               59-289
               

               Cow position:
               chr12:30476238-30476471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               28, 161
               

               Conread position:
               59-473
               

               Cow position:
               chr12:24024031-24023640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               28, 57
               

               Conread position:
               60-265
               

               Cow position:
               chr12:15991541-15991342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               134, 26
               

               Conread position:
               60-363
               

               Cow position:
               chr12:35377961-35378266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 87
               

               Conread position:
               60-378
               

               Cow position:
               chr12:23797865-23798178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               27, 92
               

               Conread position:
               60-388
               

               Cow position:
               chr12:17774567-17774883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               28, 41
               

               Conread position:
               60-394
               

               Cow position:
               chr12:29770811-29770484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 94
               

               Conread position:
               60-397
               

               Cow position:
               chr12:29780140-29779815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               27, 126
               

               Conread position:
               60-408
               

               Cow position:
               chr12:18766219-18765865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               247
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               27, 63
               

               Conread position:
               60-436
               

               Cow position:
               chr12:22287040-22287410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               248
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               9, 38
               

               Conread position:
               61-274
               

               Cow position:
               chr12:43582541-43582749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               26, 39
               

               Conread position:
               61-373
               

               Cow position:
               chr12:28213281-28213583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               26, 88
               

               Conread position:
               61-392
               

               Cow position:
               chr12:24577491-24577156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               26, 139
               

               Conread position:
               61-445
               

               Cow position:
               chr12:20075350-20075723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               26, 111
               

               Conread position:
               61-451
               

               Cow position:
               chr12:23574533-23574919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 80
               

               Conread position:
               61-454
               

               Cow position:
               chr12:42954131-42953745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               26, 47
               

               Conread position:
               61-477
               

               Cow position:
               chr12:44602266-44602683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               284
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               26, 101
               

               Conread position:
               62-463
               

               Cow position:
               chr12:5459027-5459411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 141
               

               Conread position:
               63-463
               

               Cow position:
               chr12:4162606-4162212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               276
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               24, 114
               

               Conread position:
               63-466
               

               Cow position:
               chr12:35780162-35779756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 93
               

               Conread position:
               66-356
               

               Cow position:
               chr12:25452674-25452389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               124, 22
               

               Conread position:
               67-225
               

               Cow position:
               chr12:15768180-15768340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 48
               

               Conread position:
               68-276
               

               Cow position:
               chr12:38512072-38511860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               19, 165
               

               Conread position:
               68-299
               

               Cow position:
               chr12:38454688-38454909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               218, 83
               

               Conread position:
               68-444
               

               Cow position:
               chr12:24662885-24663262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               268
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               19, 69
               

               Conread position:
               69-276
               

               Cow position:
               chr12:25820662-25820454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 162
               

               Conread position:
               69-338
               

               Cow position:
               chr12:3906239-3906512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               15, 165
               

               Conread position:
               69-454
               

               Cow position:
               chr12:15162921-15163309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 85
               

               Conread position:
               70-440
               

               Cow position:
               chr12:28748706-28749082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 45
               

               Conread position:
               71-463
               

               Cow position:
               chr12:25028009-25027596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               14, 215
               

               Conread position:
               71-480
               

               Cow position:
               chr12:25280719-25280325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 78
               

               Conread position:
               72-466
               

               Cow position:
               chr12:15204604-15204995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               13, 147
               

               Conread position:
               75-390
               

               Cow position:
               chr12:27037667-27037359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               214, 78
               

               Conread position:
               75-463
               

               Cow position:
               chr12:4596226-4596634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               287
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               12, 171
               

               Conread position:
               75-480
               

               Cow position:
               chr12:33129041-33129434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               282
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               12, 71
               

               Conread position:
               77-431
               

               Cow position:
               chr12:15763131-15762782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               10, 121
               

               Conread position:
               77-478
               

               Cow position:
               chr12:31947902-31948289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 43
               

               Conread position:
               78-463
               

               Cow position:
               chr12:36544869-36544483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 76
               

               Conread position:
               81-451
               

               Cow position:
               chr12:30194493-30194842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               113, 30
               

               Conread position:
               82-265
               

               Cow position:
               chr12:6121140-6121328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               60, 8
               

               Conread position:
               82-451
               

               Cow position:
               chr12:19401018-19400667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               207, 9
               

               Conread position:
               83-204
               

               Cow position:
               chr12:42477540-42477662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               109, 5
               

               Conread position:
               83-275
               

               Cow position:
               chr12:18021384-18021567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               109, 5
               

               Conread position:
               83-452
               

               Cow position:
               chr12:42421434-42421082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               111, 8
               

               Conread position:
               83-463
               

               Cow position:
               chr12:4768714-4769080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               83-477
               

               Cow position:
               chr12:10575389-10575777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               266
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               62, 27
               

               Conread position:
               83-480
               

               Cow position:
               chr12:13643022-13643412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               263
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               195, 65
               

               Conread position:
               84-463
               

               Cow position:
               chr12:33975990-33976364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 33
               

               Conread position:
               86-480
               

               Cow position:
               chr12:42162828-42163215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               263
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               106, 25
               

               Conread position:
               88-276
               

               Cow position:
               chr12:4182900-4182715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               105, 135
               

               Conread position:
               88-375
               

               Cow position:
               chr12:45680062-45680353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               54, 141
               

               Conread position:
               88-377
               

               Cow position:
               chr12:22539996-22540285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               46, 34
               

               Conread position:
               88-427
               

               Cow position:
               chr12:38053639-38053976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               190, 31
               

               Conread position:
               88-459
               

               Cow position:
               chr12:33851150-33851513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 65
               

               Conread position:
               88-463
               

               Cow position:
               chr12:30210273-30210631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               262
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               106, 70
               

               Conread position:
               89-440
               

               Cow position:
               chr12:25917471-25917138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               195, 64
               

               Conread position:
               96-212
               

               Cow position:
               chr12:31882147-31882263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               96, 52
               

               Conread position:
               97-473
               

               Cow position:
               chr12:17879502-17879134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               260
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               97, 33
               

               Conread position:
               97-479
               

               Cow position:
               chr12:24165376-24165751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               256
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               19, 131
               

               Conread position:
               100-363
               

               Cow position:
               chr12:18964124-18963864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               89, 53
               

               Conread position:
               100-428
               

               Cow position:
               chr12:7299665-7299335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               53, 135
               

               Conread position:
               101-208
               

               Cow position:
               chr12:32334204-32334095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               101-275
               

               Cow position:
               chr12:5638947-5639122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               70, 49
               

               Conread position:
               101-371
               

               Cow position:
               chr12:23855638-23855904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               9, 117
               

               Conread position:
               103-357
               

               Cow position:
               chr12:10491077-10491330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               13, 71
               

               Conread position:
               105-472
               

               Cow position:
               chr12:28131392-28131761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               262
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               89, 83
               

               Conread position:
               106-459
               

               Cow position:
               chr12:11587576-11587926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 115
               

               Conread position:
               107-225
               

               Cow position:
               chr12:7191452-7191332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               44, 55
               

               Conread position:
               111-473
               

               Cow position:
               chr12:8759134-8759503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               251
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               83, 105
               

               Conread position:
               114-479
               

               Cow position:
               chr12:12165475-12165831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               16, 107
               

               Conread position:
               115-460
               

               Cow position:
               chr12:12637370-12637027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 121
               

               Conread position:
               115-472
               

               Cow position:
               chr12:38774422-38774075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 101
               

               Conread position:
               115-478
               

               Cow position:
               chr12:30804158-30803803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               36, 100
               

               Conread position:
               116-365
               

               Cow position:
               chr12:19507451-19507703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               73, 37
               

               Conread position:
               116-440
               

               Cow position:
               chr12:38293465-38293786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               35, 58
               

               Conread position:
               116-462
               

               Cow position:
               chr12:28704433-28704092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               47, 9
               

               Conread position:
               117-480
               

               Cow position:
               chr12:15089334-15089693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               245
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               73, 32
               

               Conread position:
               118-392
               

               Cow position:
               chr12:24206976-24207267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               119-463
               

               Cow position:
               chr12:32051333-32051681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               250
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               32, 54
               

               Conread position:
               119-473
               

               Cow position:
               chr12:15050798-15050455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 112
               

               Conread position:
               119-479
               

               Cow position:
               chr12:35123714-35124069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 28
               

               Conread position:
               120-478
               

               Cow position:
               chr12:23916665-23917013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 114
               

               Conread position:
               120-480
               

               Cow position:
               chr12:1998977-1998620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               250
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               122-393
               

               Cow position:
               chr12:44919859-44920126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               70, 29
               

               Conread position:
               123-433
               

               Cow position:
               chr12:20636333-20636019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               28, 120
               

               Conread position:
               123-461
               

               Cow position:
               chr12:42174240-42174590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 108
               

               Conread position:
               125-408
               

               Cow position:
               chr12:3599925-3599652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               68, 96
               

               Conread position:
               125-459
               

               Cow position:
               chr12:3623522-3623848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               59, 8
               

               Conread position:
               125-463
               

               Cow position:
               chr12:41658895-41658560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               68, 26
               

               Conread position:
               127-459
               

               Cow position:
               chr12:8669554-8669884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 89
               

               Conread position:
               129-377
               

               Cow position:
               chr12:42233888-42234137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               27, 99
               

               Conread position:
               129-462
               

               Cow position:
               chr12:6242344-6242015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               65, 100
               

               Conread position:
               129-463
               

               Cow position:
               chr12:42784139-42784468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               66, 22
               

               Conread position:
               129-473
               

               Cow position:
               chr12:15103096-15103450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               65, 101
               

               Conread position:
               129-477
               

               Cow position:
               chr12:11546862-11547218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               130-451
               

               Cow position:
               chr12:25809257-25809583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               27, 65
               

               Conread position:
               130-480
               

               Cow position:
               chr12:4719778-4720120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               131-343
               

               Cow position:
               chr12:9894616-9894826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               21, 91
               

               Conread position:
               131-457
               

               Cow position:
               chr12:22485647-22485968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               20, 94
               

               Conread position:
               133-378
               

               Cow position:
               chr12:25188023-25188267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               61, 33
               

               Conread position:
               133-460
               

               Cow position:
               chr12:37701357-37701689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               10, 84
               

               Conread position:
               134-478
               

               Cow position:
               chr12:36790974-36790639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               239
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               61, 15
               

               Conread position:
               135-338
               

               Cow position:
               chr12:41216046-41215846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               57, 16
               

               Conread position:
               136-438
               

               Cow position:
               chr12:6102991-6102691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               15, 96
               

               Conread position:
               136-473
               

               Cow position:
               chr12:37170104-37169776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               57, 17
               

               Conread position:
               136-474
               

               Cow position:
               chr12:15039137-15038809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               57, 15
               

               Conread position:
               136-480
               

               Cow position:
               chr12:33298028-33298361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               57, 30
               

               Conread position:
               138-480
               

               Cow position:
               chr12:12300761-12301107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               57, 78
               

               Conread position:
               138-480
               

               Cow position:
               chr12:44352973-44352627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               89, 70
               

               Conread position:
               141-377
               

               Cow position:
               chr12:4820799-4821039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               53, 80
               

               Conread position:
               141-382
               

               Cow position:
               chr12:42100010-42099776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               155, 52
               

               Conread position:
               141-459
               

               Cow position:
               chr12:46120986-46120661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               54, 12
               

               Conread position:
               142-480
               

               Cow position:
               chr12:13988216-13988550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               51, 9
               

               Conread position:
               149-468
               

               Cow position:
               chr12:26217975-26217661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               44, 82
               

               Conread position:
               150-463
               

               Cow position:
               chr12:19258131-19258437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               226
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               42, 66
               

               Conread position:
               150-470
               

               Cow position:
               chr12:23446574-23446883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               37, 57
               

               Conread position:
               151-458
               

               Cow position:
               chr12:43560298-43559986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               153-397
               

               Cow position:
               chr12:45090503-45090254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               42, 169
               

               Conread position:
               153-458
               

               Cow position:
               chr12:3372004-3371698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               228
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               40, 130
               

               Conread position:
               153-459
               

               Cow position:
               chr12:26575740-26576049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               7, 221
               

               Conread position:
               153-473
               

               Cow position:
               chr12:7539937-7539615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               41, 91
               

               Conread position:
               154-477
               

               Cow position:
               chr12:7110056-7110383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               39, 80
               

               Conread position:
               154-478
               

               Cow position:
               chr12:24032357-24032662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               132, 39
               

               Conread position:
               154-480
               

               Cow position:
               chr12:28789898-28790232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 96
               

               Conread position:
               155-378
               

               Cow position:
               chr12:15699931-15700159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               156-451
               

               Cow position:
               chr12:29675279-29674990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               207
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               137, 58
               

               Conread position:
               156-466
               

               Cow position:
               chr12:9543888-9543581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               37, 128
               

               Conread position:
               156-480
               

               Cow position:
               chr12:42286897-42286561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               15, 225
               

               Conread position:
               157-480
               

               Cow position:
               chr12:16670124-16670444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               227
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               32, 58
               

               Conread position:
               159-480
               

               Cow position:
               chr12:10942146-10942474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 75
               

               Conread position:
               161-463
               

               Cow position:
               chr12:38852167-38851862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               38, 67
               

               Conread position:
               161-479
               

               Cow position:
               chr12:38216176-38215846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               32, 47
               

               Conread position:
               162-464
               

               Cow position:
               chr12:38220119-38220401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               33, 60
               

               Conread position:
               164-382
               

               Cow position:
               chr12:44733225-44733009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               29, 8
               

               Conread position:
               164-459
               

               Cow position:
               chr12:37008839-37008553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               6, 70
               

               Conread position:
               169-480
               

               Cow position:
               chr12:24152208-24152519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               31, 57
               

               Conread position:
               172-480
               

               Cow position:
               chr12:17269673-17269983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               22, 60
               

               Conread position:
               175-409
               

               Cow position:
               chr12:24222641-24222412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               27, 45
               

               Conread position:
               175-470
               

               Cow position:
               chr12:37814747-37814450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               18, 41
               

               Conread position:
               175-472
               

               Cow position:
               chr12:19261075-19261364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               215
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               111, 19
               

               Conread position:
               175-480
               

               Cow position:
               chr12:14222853-14223159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 85
               

               Conread position:
               175-480
               

               Cow position:
               chr12:16056983-16056677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 51
               

               Conread position:
               177-463
               

               Cow position:
               chr12:35652981-35652706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               16, 94
               

               Conread position:
               177-478
               

               Cow position:
               chr12:38126648-38126345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               216
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               16, 49
               

               Conread position:
               179-466
               

               Cow position:
               chr12:18563032-18563326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               51, 208
               

               Conread position:
               180-479
               

               Cow position:
               chr12:26750077-26749774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 93
               

               Conread position:
               181-471
               

               Cow position:
               chr12:11701000-11700708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               97, 47
               

               Conread position:
               182-477
               

               Cow position:
               chr12:31269034-31269333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               13, 67
               

               Conread position:
               189-479
               

               Cow position:
               chr12:35241210-35240925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               212
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               35, 40
               

               Conread position:
               191-451
               

               Cow position:
               chr12:29358162-29357916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               191-455
               

               Cow position:
               chr12:23939118-23939372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               98, 33
               

               Conread position:
               191-476
               

               Cow position:
               chr12:18583098-18582822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               95, 37
               

               Conread position:
               191-479
               

               Cow position:
               chr12:11659820-11660106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               95, 34
               

               Conread position:
               192-466
               

               Cow position:
               chr12:18413599-18413347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               192-478
               

               Cow position:
               chr12:18103715-18103443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               194-451
               

               Cow position:
               chr12:4510344-4510090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               95, 19
               

               Conread position:
               194-455
               

               Cow position:
               chr12:21780062-21780317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               95, 30
               

               Conread position:
               194-468
               

               Cow position:
               chr12:4954728-4954987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               99, 21
               

               Conread position:
               194-473
               

               Cow position:
               chr12:42285866-42286138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               99, 38
               

               Conread position:
               194-480
               

               Cow position:
               chr12:9129794-9130081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               24, 137
               

               Conread position:
               194-480
               

               Cow position:
               chr12:25343680-25343961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               75, 26
               

               Conread position:
               197-460
               

               Cow position:
               chr12:17786748-17786485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               42, 16
               

               Conread position:
               197-480
               

               Cow position:
               chr12:37514382-37514103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               89, 31
               

               Conread position:
               201-463
               

               Cow position:
               chr12:17479138-17478877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               88, 24
               

               Conread position:
               203-463
               

               Cow position:
               chr12:6687798-6688046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               87, 24
               

               Conread position:
               204-463
               

               Cow position:
               chr12:42749348-42749604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               160, 35
               

               Conread position:
               207-463
               

               Cow position:
               chr12:5554425-5554176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               35, 6
               

               Conread position:
               210-463
               

               Cow position:
               chr12:45168106-45167847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               79, 13
               

               Conread position:
               214-473
               

               Cow position:
               chr12:45002152-45001898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               22, 8
               

               Conread position:
               218-463
               

               Cow position:
               chr12:27894854-27894609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               21, 85
               

               Conread position:
               219-443
               

               Cow position:
               chr12:18157630-18157404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               21, 138
               

               Conread position:
               219-480
               

               Cow position:
               chr12:17252278-17252026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               225-471
               

               Cow position:
               chr12:9065479-9065728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               227-462
               

               Cow position:
               chr12:30946665-30946906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               227-479
               

               Cow position:
               chr12:42631112-42630858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               227-480
               

               Cow position:
               chr12:24094838-24095096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 196
               

               Conread position:
               228-394
               

               Cow position:
               chr12:7920171-7920337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               61, 12
               

               Conread position:
               228-463
               

               Cow position:
               chr12:11525668-11525430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               228-471
               

               Cow position:
               chr12:4193755-4194004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               12, 216
               

               Conread position:
               228-477
               

               Cow position:
               chr12:18514000-18513748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               61, 37
               

               Conread position:
               229-460
               

               Cow position:
               chr12:33948833-33949058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               57, 152
               

               Conread position:
               230-472
               

               Cow position:
               chr12:10827712-10827956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               9, 144
               

               Conread position:
               231-449
               

               Cow position:
               chr12:20316601-20316381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               231-459
               

               Cow position:
               chr12:40158091-40157871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               231-480
               

               Cow position:
               chr12:34029196-34028947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               58, 126
               

               Conread position:
               232-447
               

               Cow position:
               chr12:9514293-9514513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               232-451
               

               Cow position:
               chr12:18087762-18087543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               64, 30
               

               Conread position:
               232-458
               

               Cow position:
               chr12:5135165-5135388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               232-463
               

               Cow position:
               chr12:7343825-7343593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               64, 47
               

               Conread position:
               232-463
               

               Cow position:
               chr12:29966039-29966266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               42, 49
               

               Conread position:
               232-472
               

               Cow position:
               chr12:12232815-12233050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               95, 57
               

               Conread position:
               232-475
               

               Cow position:
               chr12:16493431-16493178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               49, 150
               

               Conread position:
               232-476
               

               Cow position:
               chr12:15495830-15496072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               50, 174
               

               Conread position:
               232-478
               

               Cow position:
               chr12:5839724-5839485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               61, 151
               

               Conread position:
               232-479
               

               Cow position:
               chr12:20404078-20404328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               232-480
               

               Cow position:
               chr12:4093828-4093591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               233-421
               

               Cow position:
               chr12:32753446-32753638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               233-463
               

               Cow position:
               chr12:7183810-7183576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               233-463
               

               Cow position:
               chr12:16605740-16605508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               53, 174
               

               Conread position:
               233-466
               

               Cow position:
               chr12:41218738-41218503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 49
               

               Conread position:
               233-473
               

               Cow position:
               chr12:27176567-27176809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               48, 185
               

               Conread position:
               233-473
               

               Cow position:
               chr12:27192437-27192195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               48, 185
               

               Conread position:
               233-474
               

               Cow position:
               chr12:28788130-28787894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               60, 161
               

               Conread position:
               233-478
               

               Cow position:
               chr12:6206266-6206509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               56, 36
               

               Conread position:
               233-480
               

               Cow position:
               chr12:33495165-33495412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               9, 137
               

               Conread position:
               234-444
               

               Cow position:
               chr12:46122597-46122807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               61, 45
               

               Conread position:
               234-463
               

               Cow position:
               chr12:33625477-33625242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               234-463
               

               Cow position:
               chr12:43974227-43974453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               234-466
               

               Cow position:
               chr12:22291552-22291325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               53, 160
               

               Conread position:
               234-479
               

               Cow position:
               chr12:6188180-6187932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               235-451
               

               Cow position:
               chr12:47267374-47267159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               58, 141
               

               Conread position:
               235-459
               

               Cow position:
               chr12:31925787-31926012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               60, 29
               

               Conread position:
               235-473
               

               Cow position:
               chr12:28699851-28699606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               39, 8
               

               Conread position:
               235-479
               

               Cow position:
               chr12:7902870-7902626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               46, 136
               

               Conread position:
               235-480
               

               Cow position:
               chr12:45092381-45092617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               54, 145
               

               Conread position:
               236-462
               

               Cow position:
               chr12:24167008-24166789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               50, 154
               

               Conread position:
               237-468
               

               Cow position:
               chr12:45039044-45039273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               44, 146
               

               Conread position:
               237-476
               

               Cow position:
               chr12:37255957-37256192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               119, 40
               

               Conread position:
               237-480
               

               Cow position:
               chr12:39746343-39746588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 111
               

               Conread position:
               237-480
               

               Cow position:
               chr12:42924176-42923933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               52, 139
               

               Conread position:
               238-480
               

               Cow position:
               chr12:11977622-11977867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               238-480
               

               Cow position:
               chr12:36261627-36261875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               238-480
               

               Cow position:
               chr12:38155133-38154890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               239-464
               

               Cow position:
               chr12:8523422-8523193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 50
               

               Conread position:
               244-480
               

               Cow position:
               chr12:4780468-4780233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               52, 25
               

               Conread position:
               245-480
               

               Cow position:
               chr12:27385435-27385665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               44, 80
               

               Conread position:
               249-430
               

               Cow position:
               chr12:7457594-7457412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               163, 36
               

               Conread position:
               249-447
               

               Cow position:
               chr12:12532542-12532346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               47, 106
               

               Conread position:
               250-479
               

               Cow position:
               chr12:12166501-12166273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               39, 12
               

               Conread position:
               251-460
               

               Cow position:
               chr12:13911629-13911418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               38, 8
               

               Conread position:
               252-411
               

               Cow position:
               chr12:25355802-25355644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               23, 31
               

               Conread position:
               252-451
               

               Cow position:
               chr12:8153138-8153338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               252-458
               

               Cow position:
               chr12:42434788-42434581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               252-463
               

               Cow position:
               chr12:29895358-29895571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               252-463
               

               Cow position:
               chr12:31067489-31067274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               252-466
               

               Cow position:
               chr12:2734956-2734747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               34, 142
               
UCSC Genome Browser
               Conread position:
               252-480
               

               Cow position:
               chr12:35469495-35469275 (view  custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               37, 110
               
UCSC Genome Browser
               
               
               
Conread position: 252-480

               
               
               
Cow position: chr12:41801879-41802112 (view  custom track)

               
               
               
Alignm length: 234

               
               
               
Alignm identity: 155

               
               
               
Alignm E-value: 3e-23

               
               
               
Alignm gaps (pig, cow): 37, 0
UCSC Genome Browser
               
               
               
Conread position: 253-459

               
               
               
Cow position: chr12:26147217-26147011 (view  custom track)

               
               
               
Alignm length: 208

               
               
               
Alignm identity: 156

               
               
               
Alignm E-value: 1e-38

               
               
               
Alignm gaps (pig, cow): 36, 132

               
               
               Conread position:253-459
               
               
               Cow position:chr12:28804723-28804515 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:140
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):40, 167

               
               
               Conread position:253-461
               
               
               Cow position:chr12:43854847-43855049 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:156
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):36, 45

               
               
               Conread position:253-463
               
               
               Cow position:chr12:45701492-45701286 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:145
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):34, 151

               
               
               Conread position:253-468
               
               
               Cow position:chr12:29057342-29057556 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:155
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):36, 118

               
               
               Conread position:253-474
               
               
               Cow position:chr12:24437682-24437455 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:163
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):48, 26

               
               
               Conread position:254-455
               
               
               Cow position:chr12:15389025-15389223 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:147
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):43, 25

               
               
               Conread position:254-463
               
               
               Cow position:chr12:23105891-23106100 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:148
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):35, 139

               
               
               Conread position:254-463
               
               
               Cow position:chr12:23714628-23714833 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:155
               
               
               Alignm E-value:7e-32
               
               
               Alignm gaps (pig, cow):7, 128

               
               
               Conread position:255-463
               
               
               Cow position:chr12:14986704-14986908 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:159
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):34, 107

               
               
               Conread position:255-463
               
               
               Cow position:chr12:48578798-48578996 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:148
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):34, 110

               
               
               Conread position:258-459
               
               
               Cow position:chr12:10950445-10950243 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:134
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):31, 0

               
               
               Conread position:258-480
               
               
               Cow position:chr12:26357411-26357189 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:166
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):16, 23

               
               
               Conread position:259-433
               
               
               Cow position:chr12:21389830-21390005 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:123
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):38, 0

               
               
               Conread position:259-474
               
               
               Cow position:chr12:25823268-25823053 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:160
               
               
               Alignm E-value:7e-32
               
               
               Alignm gaps (pig, cow):30, 49

               
               
               Conread position:259-480
               
               
               Cow position:chr12:39150093-39149873 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:164
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):34, 207

               
               
               Conread position:260-451
               
               
               Cow position:chr12:41221049-41220864 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:140
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):30, 109

               
               
               Conread position:261-480
               
               
               Cow position:chr12:6958182-6958396 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:158
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):14, 20

               
               
               Conread position:263-478
               
               
               Cow position:chr12:37480872-37480659 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:156
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):26, 53

               
               
               Conread position:264-473
               
               
               Cow position:chr12:44022384-44022591 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:149
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):29, 79

               
               
               Conread position:264-479
               
               
               Cow position:chr12:20207798-20208017 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:151
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):32, 206

               
               
               Conread position:266-478
               
               
               Cow position:chr12:30937049-30936839 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):23, 55

               
               
               Conread position:266-479
               
               
               Cow position:chr12:11230199-11230417 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:151
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:267-473
               
               
               Cow position:chr12:34878665-34878455 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:147
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):29, 114

               
               
               Conread position:268-451
               
               
               Cow position:chr12:42944100-42944286 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:133
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):31, 0

               
               
               Conread position:268-463
               
               
               Cow position:chr12:2964018-2964207 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:143
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:268-465
               
               
               Cow position:chr12:29316494-29316299 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:140
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):18, 142

               
               
               Conread position:268-470
               
               
               Cow position:chr12:29731282-29731479 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:149
               
               
               Alignm E-value:6e-31
               
               
               Alignm gaps (pig, cow):18, 110

               
               
               Conread position:268-480
               
               
               Cow position:chr12:26356745-26356530 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:149
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):28, 0

               
               
               Conread position:269-480
               
               
               Cow position:chr12:43474727-43474935 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:156
               
               
               Alignm E-value:6e-31
               
               
               Alignm gaps (pig, cow):27, 110

               
               
               Conread position:270-452
               
               
               Cow position:chr12:38087114-38087296 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:127
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):19, 113

               
               
               Conread position:270-463
               
               
               Cow position:chr12:16386487-16386295 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:143
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):19, 117

               
               
               Conread position:270-463
               
               
               Cow position:chr12:25456378-25456582 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:147
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):19, 0

               
               
               Conread position:270-474
               
               
               Cow position:chr12:35136889-35137093 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:150
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:271-453
               
               
               Cow position:chr12:44542235-44542414 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:133
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):25, 107

               
               
               Conread position:271-463
               
               
               Cow position:chr12:43868810-43868614 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):17, 0

               
               
               Conread position:273-479
               
               
               Cow position:chr12:29195271-29195473 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:147
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:275-478
               
               
               Cow position:chr12:42951711-42951515 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:149
               
               
               Alignm E-value:6e-31
               
               
               Alignm gaps (pig, cow):20, 0

               
               
               Conread position:278-480
               
               
               Cow position:chr12:36111813-36111613 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:148
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):88, 9

               
               
               Conread position:280-460
               
               
               Cow position:chr12:22752605-22752790 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:280-461
               
               
               Cow position:chr12:6666552-6666720 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:135
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):17, 0

               
               
               Conread position:280-463
               
               
               Cow position:chr12:17108139-17108315 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:134
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):13, 31

               
               
               Conread position:280-478
               
               
               Cow position:chr12:30476486-30476690 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:145
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:281-459
               
               
               Cow position:chr12:45152278-45152449 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:131
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):13, 0

               
               
               Conread position:281-477
               
               
               Cow position:chr12:22047903-22048101 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:159
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):186, 0

               
               
               Conread position:286-458
               
               
               Cow position:chr12:43961486-43961658 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:287-463
               
               
               Cow position:chr12:1952814-1952644 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:125
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):89, 0

               
               
               Conread position:287-474
               
               
               Cow position:chr12:19272701-19272516 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):175, 113

               
               
               Conread position:287-478
               
               
               Cow position:chr12:45782214-45782397 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:140
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:287-480
               
               
               Cow position:chr12:34340219-34340404 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:287-480
               
               
               Cow position:chr12:37123638-37123830 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:137
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):81, 0

               
               
               Conread position:288-466
               
               
               Cow position:chr12:1089404-1089226 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:137
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):49, 27

               
               
               Conread position:290-479
               
               
               Cow position:chr12:9866772-9866584 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:136
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):11, 0

               
               
               Conread position:294-468
               
               
               Cow position:chr12:37945948-37945780 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:132
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):21, 0

               
               
               Conread position:295-436
               
               
               Cow position:chr12:11106585-11106444 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:109
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:295-459
               
               
               Cow position:chr12:31841565-31841727 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:127
               
               
               Alignm E-value:7e-32
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:295-460
               
               
               Cow position:chr12:11272830-11272671 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):62, 0

               
               
               Conread position:295-460
               
               
               Cow position:chr12:18014206-18014371 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:117
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:295-463
               
               
               Cow position:chr12:24397167-24397004 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:132
               
               
               Alignm E-value:7e-32
               
               
               Alignm gaps (pig, cow):26, 0

               
               
               Conread position:295-463
               
               
               Cow position:chr12:44013601-44013428 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:124
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):95, 129

               
               
               Conread position:295-466
               
               
               Cow position:chr12:36859251-36859421 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:122
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):72, 5

               
               
               Conread position:295-477
               
               
               Cow position:chr12:31237965-31237784 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:136
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):72, 66

               
               
               Conread position:295-479
               
               
               Cow position:chr12:9465189-9465006 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:126
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):170, 0

               
               
               Conread position:295-480
               
               
               Cow position:chr12:11857647-11857458 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:140
               
               
               Alignm E-value:6e-31
               
               
               Alignm gaps (pig, cow):142, 0

               
               
               Conread position:295-480
               
               
               Cow position:chr12:12699645-12699458 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:145
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):167, 0

               
               
               Conread position:295-480
               
               
               Cow position:chr12:17929077-17928905 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:135
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:295-480
               
               
               Cow position:chr12:22323278-22323091 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:147
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):87, 174

               
               
               Conread position:295-480
               
               
               Cow position:chr12:27718558-27718742 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:126
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):170, 0

               
               
               Conread position:295-480
               
               
               Cow position:chr12:30042721-30042904 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:139
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):170, 0

               
               
               Conread position:295-480
               
               
               Cow position:chr12:35663959-35664138 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:138
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):165, 50

               
               
               Conread position:295-480
               
               
               Cow position:chr12:39646243-39646059 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:126
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):73, 0

               
               
               Conread position:295-480
               
               
               Cow position:chr12:43551226-43551040 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):50, 173

               
               
               Conread position:296-463
               
               
               Cow position:chr12:4008090-4007922 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:122
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):71, 108

               
               
               Conread position:296-463
               
               
               Cow position:chr12:14987796-14987961 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:117
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):84, 0

               
               
               Conread position:296-463
               
               
               Cow position:chr12:29180672-29180835 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:120
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):99, 0

               
               
               Conread position:296-463
               
               
               Cow position:chr12:31883335-31883507 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:124
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):75, 16

               
               
               Conread position:296-463
               
               
               Cow position:chr12:38679046-38679209 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:128
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):84, 0

               
               
               Conread position:296-473
               
               
               Cow position:chr12:25528563-25528388 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:132
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):167, 84

               
               
               Conread position:296-474
               
               
               Cow position:chr12:17490212-17490389 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:135
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):166, 28

               
               
               Conread position:296-478
               
               
               Cow position:chr12:17254138-17254320 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):16, 104

               
               
               Conread position:296-480
               
               
               Cow position:chr12:8842301-8842118 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:132
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):169, 0

               
               
               Conread position:296-480
               
               
               Cow position:chr12:41684504-41684682 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:137
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):97, 0

               
               
               Conread position:297-463
               
               
               Cow position:chr12:8483181-8483015 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:124
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):63, 136

               
               
               Conread position:297-463
               
               
               Cow position:chr12:38691923-38691757 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:127
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:297-466
               
               
               Cow position:chr12:9866237-9866064 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:125
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):80, 0

               
               
               Conread position:297-468
               
               
               Cow position:chr12:16293283-16293454 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:123
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):72, 64

               
               
               Conread position:297-471
               
               
               Cow position:chr12:16107397-16107572 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:129
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):60, 68

               
               
               Conread position:297-472
               
               
               Cow position:chr12:3057085-3057261 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:143
               
               
               Alignm E-value:5e-40
               
               
               Alignm gaps (pig, cow):167, 73

               
               
               Conread position:297-473
               
               
               Cow position:chr12:4014435-4014251 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:139
               
               
               Alignm E-value:6e-31
               
               
               Alignm gaps (pig, cow):101, 0

               
               
               Conread position:297-473
               
               
               Cow position:chr12:12780115-12779934 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:135
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):88, 42

               
               
               Conread position:297-474
               
               
               Cow position:chr12:15832191-15832379 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:142
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):73, 153

               
               
               Conread position:297-479
               
               
               Cow position:chr12:16006900-16007087 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:137
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):130, 177

               
               
               Conread position:297-480
               
               
               Cow position:chr12:4865058-4865237 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:133
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:297-480
               
               
               Cow position:chr12:39339709-39339887 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:129
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):98, 0

               
               
               Conread position:297-480
               
               
               Cow position:chr12:39735666-39735486 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:140
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):171, 114

               
               
               Conread position:297-480
               
               
               Cow position:chr12:41989687-41989500 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:137
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):79, 0

               
               
               Conread position:298-473
               
               
               Cow position:chr12:4512451-4512276 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:133
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):161, 77

               
               
               Conread position:298-478
               
               
               Cow position:chr12:987146-987340 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:140
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):52, 0

               
               
               Conread position:298-480
               
               
               Cow position:chr12:583511-583326 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:138
               
               
               Alignm E-value:7e-32
               
               
               Alignm gaps (pig, cow):78, 0

               
               
               Conread position:300-451
               
               
               Cow position:chr12:7671726-7671576 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:109
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):131, 0

               
               
               Conread position:300-455
               
               
               Cow position:chr12:18938869-18939028 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:118
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):124, 0

               
               
               Conread position:300-463
               
               
               Cow position:chr12:40043012-40043169 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:124
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):67, 61

               
               
               Conread position:300-466
               
               
               Cow position:chr12:15060457-15060291 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:120
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):60, 65

               
               
               Conread position:300-479
               
               
               Cow position:chr12:20356808-20356633 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:137
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):161, 129

               
               
               Conread position:300-480
               
               
               Cow position:chr12:26513927-26513748 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:134
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):61, 132

               
               
               Conread position:301-449
               
               
               Cow position:chr12:43351936-43352084 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:109
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:301-457
               
               
               Cow position:chr12:46144055-46144208 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:118
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):98, 43

               
               
               Conread position:301-458
               
               
               Cow position:chr12:29762248-29762087 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:124
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):70, 0

               
               
               Conread position:301-459
               
               
               Cow position:chr12:1339664-1339509 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:114
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):129, 0

               
               
               Conread position:301-459
               
               
               Cow position:chr12:25814155-25814314 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:123
               
               
               Alignm E-value:6e-31
               
               
               Alignm gaps (pig, cow):107, 0

               
               
               Conread position:301-461
               
               
               Cow position:chr12:20355217-20355382 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:118
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):75, 0

               
               
               Conread position:301-463
               
               
               Cow position:chr12:24532623-24532461 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:125
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):66, 59

               
               
               Conread position:301-463
               
               
               Cow position:chr12:31602820-31602661 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:128
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:301-463
               
               
               Cow position:chr12:43619282-43619444 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:131
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):41, 133

               
               
               Conread position:301-466
               
               
               Cow position:chr12:46064864-46065029 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:128
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):37, 46

               
               
               Conread position:301-468
               
               
               Cow position:chr12:6426898-6427065 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:128
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):116, 10

               
               
               Conread position:301-472
               
               
               Cow position:chr12:18561538-18561709 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:130
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):78, 67

               
               
               Conread position:301-473
               
               
               Cow position:chr12:14396783-14396618 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:132
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):160, 82

               
               
               Conread position:301-473
               
               
               Cow position:chr12:31276606-31276783 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:127
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):70, 0

               
               
               Conread position:301-477
               
               
               Cow position:chr12:47044440-47044265 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:127
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):149, 60

               
               
               Conread position:301-478
               
               
               Cow position:chr12:3454696-3454877 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:142
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):95, 131

               
               
               Conread position:301-478
               
               
               Cow position:chr12:46106792-46106968 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:130
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):160, 16

               
               
               Conread position:301-480
               
               
               Cow position:chr12:18578830-18578649 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:132
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):74, 19

               
               
               Conread position:301-480
               
               
               Cow position:chr12:34877832-34878016 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:138
               
               
               Alignm E-value:6e-31
               
               
               Alignm gaps (pig, cow):69, 0

               
               
               Conread position:301-480
               
               
               Cow position:chr12:37702978-37702803 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):155, 69

               
               
               Conread position:301-480
               
               
               Cow position:chr12:38032138-38031967 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:131
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:301-480
               
               
               Cow position:chr12:45136605-45136782 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:129
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):69, 148

               
               
               Conread position:302-459
               
               
               Cow position:chr12:44861257-44861100 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:116
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:303-459
               
               
               Cow position:chr12:10593769-10593921 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:115
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):124, 0

               
               
               Conread position:303-462
               
               
               Cow position:chr12:4182283-4182129 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:116
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):22, 0

               
               
               Conread position:303-472
               
               
               Cow position:chr12:42561905-42562067 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:127
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):71, 0

               
               
               Conread position:303-473
               
               
               Cow position:chr12:16628991-16628827 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:128
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):7, 88

               
               
               Conread position:304-462
               
               
               Cow position:chr12:41420861-41420699 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:122
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):82, 0

               
               
               Conread position:304-473
               
               
               Cow position:chr12:34533068-34532901 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:128
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):57, 0

               
               
               Conread position:304-480
               
               
               Cow position:chr12:29944943-29944760 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:132
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:306-451
               
               
               Cow position:chr12:36241379-36241238 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:114
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:306-474
               
               
               Cow position:chr12:24146641-24146812 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:125
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):134, 53

               
               
               Conread position:306-479
               
               
               Cow position:chr12:2835410-2835582 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:133
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):84, 52

               
               
               Conread position:309-468
               
               
               Cow position:chr12:42973382-42973538 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:115
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):111, 0

               
               
               Conread position:309-472
               
               
               Cow position:chr12:8143800-8143643 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:125
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):30, 0

               
               
               Conread position:309-477
               
               
               Cow position:chr12:4109053-4109223 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:122
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):153, 0

               
               
               Conread position:309-478
               
               
               Cow position:chr12:13995788-13995618 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:136
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):100, 0

               
               
               Conread position:309-478
               
               
               Cow position:chr12:18978697-18978860 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:132
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):46, 53

               
               
               Conread position:309-480
               
               
               Cow position:chr12:38002134-38002316 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:138
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):36, 42

               
               
               Conread position:309-480
               
               
               Cow position:chr12:39282695-39282525 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:129
               
               
               Alignm E-value:6e-31
               
               
               Alignm gaps (pig, cow):146, 0

               
               
               Conread position:310-463
               
               
               Cow position:chr12:8710994-8711143 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:114
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):46, 52

               
               
               Conread position:310-463
               
               
               Cow position:chr12:29880138-29879985 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:111
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:311-472
               
               
               Cow position:chr12:40435031-40434873 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:119
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):55, 0

               
               
               Conread position:311-474
               
               
               Cow position:chr12:37718759-37718597 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:126
               
               
               Alignm E-value:7e-32
               
               
               Alignm gaps (pig, cow):154, 0

               
               
               Conread position:311-474
               
               
               Cow position:chr12:37742310-37742471 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:126
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):153, 0

               
               
               Conread position:312-457
               
               
               Cow position:chr12:10834120-10833976 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:114
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):141, 89

               
               
               Conread position:312-463
               
               
               Cow position:chr12:44892220-44892370 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:112
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:312-468
               
               
               Cow position:chr12:12722904-12722754 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:118
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):78, 91

               
               
               Conread position:312-473
               
               
               Cow position:chr12:27663980-27663816 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:130
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):148, 0

               
               
               Conread position:312-473
               
               
               Cow position:chr12:32808600-32808444 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:120
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):156, 84

               
               
               Conread position:312-476
               
               
               Cow position:chr12:25819688-25819527 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:128
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):149, 79

               
               
               Conread position:313-473
               
               
               Cow position:chr12:24533802-24533643 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:121
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):105, 75

               
               
               Conread position:314-454
               
               
               Cow position:chr12:10456152-10456294 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:108
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):13, 0

               
               
               Conread position:315-474
               
               
               Cow position:chr12:37420490-37420331 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:120
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-478
               
               
               Cow position:chr12:20637520-20637363 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:127
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):11, 0

               
               
               Conread position:317-480
               
               
               Cow position:chr12:39738281-39738117 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:130
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):151, 35

               
               
               Conread position:318-473
               
               
               Cow position:chr12:41111701-41111545 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:114
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):130, 68

               
               
               Conread position:319-480
               
               
               Cow position:chr12:5246930-5247090 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:119
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):135, 59

               
               
               Conread position:320-480
               
               
               Cow position:chr12:9055398-9055238 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:120
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-460
               
               
               Cow position:chr12:25299382-25299519 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:139
               
               
               Alignm identity:111
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:322-463
               
               
               Cow position:chr12:29289809-29289948 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:113
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):10, 0

               
               
               Conread position:322-480
               
               
               Cow position:chr12:5344106-5343950 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:118
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):62, 110

               
               
               Conread position:322-480
               
               
               Cow position:chr12:14360665-14360822 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:123
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:325-463
               
               
               Cow position:chr12:8481817-8481683 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:139
               
               
               Alignm identity:108
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):102, 0

               
               
               Conread position:325-463
               
               
               Cow position:chr12:39320414-39320551 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:139
               
               
               Alignm identity:108
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):84, 0

               
               
               Conread position:325-463
               
               
               Cow position:chr12:41317087-41316949 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:139
               
               
               Alignm identity:104
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:325-479
               
               
               Cow position:chr12:26670089-26670243 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:120
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):60, 73

               
               
               Conread position:327-477
               
               
               Cow position:chr12:42575623-42575473 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:117
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):91, 102

               
               
               Conread position:329-461
               
               
               Cow position:chr12:3579514-3579643 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:133
               
               
               Alignm identity:107
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):50, 0

               
               
               Conread position:331-473
               
               
               Cow position:chr12:6719419-6719561 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:115
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:332-474
               
               
               Cow position:chr12:17331900-17332046 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:110
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):56, 0

               
               
               Conread position:335-463
               
               
               Cow position:chr12:35685136-35685010 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:129
               
               
               Alignm identity:99
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):28, 0

               
               
               Conread position:335-463
               
               
               Cow position:chr12:44162505-44162379 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:129
               
               
               Alignm identity:98
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):26, 0

               
               
               Conread position:335-480
               
               
               Cow position:chr12:44576273-44576419 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:109
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):64, 132

               
               
               Conread position:339-480
               
               
               Cow position:chr12:11167906-11168047 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:111
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):129, 57

               
               
               Conread position:340-472
               
               
               Cow position:chr12:24482285-24482417 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:133
               
               
               Alignm identity:107
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:346-479
               
               
               Cow position:chr12:2704869-2704736 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:103
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):115, 30

               
               
               Conread position:348-480
               
               
               Cow position:chr12:29947661-29947531 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:135
               
               
               Alignm identity:107
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):120, 47

               
               
               Conread position:351-463
               
               
               Cow position:chr12:11676385-11676497 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:113
               
               
               Alignm identity:89
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:351-478
               
               
               Cow position:chr12:19664272-19664145 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:129
               
               
               Alignm identity:98
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):39, 111

               
               
               Conread position:352-479
               
               
               Cow position:chr12:2766529-2766659 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:134
               
               
               Alignm identity:106
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):32, 68

               
               
               Conread position:354-479
               
               
               Cow position:chr12:44211208-44211332 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:126
               
               
               Alignm identity:96
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:362-463
               
               
               Cow position:chr12:40309372-40309473 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:102
               
               
               Alignm identity:85
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:370-474
               
               
               Cow position:chr12:31253207-31253310 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:105
               
               
               Alignm identity:85
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:371-473
               
               
               Cow position:chr12:38185912-38186013 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:103
               
               
               Alignm identity:85
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):56, 0

               
               
               Conread position:371-480
               
               
               Cow position:chr12:31711813-31711704 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:110
               
               
               Alignm identity:89
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:388-473
               
               
               Cow position:chr12:24273286-24273201 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:86
               
               
               Alignm identity:75
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):0, 0
Show alignments to all cow chromosomes.
Conread position:	1-141
Cow position:	chr12:3600200-3600052 (view UCSC Genome Browser custom track)
Alignm length:	149
Alignm identity:	112
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	36, 0
Conread position:	1-145
Cow position:	chr12:3160760-3160916 (view UCSC Genome Browser custom track)
Alignm length:	157
Alignm identity:	123
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	55, 0
Conread position:	1-149
Cow position:	chr12:29119594-29119751 (view UCSC Genome Browser custom track)
Alignm length:	158
Alignm identity:	122
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	18, 0
Conread position:	1-161
Cow position:	chr12:29762903-29762731 (view UCSC Genome Browser custom track)
Alignm length:	174
Alignm identity:	129
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	53, 154
Conread position:	1-177
Cow position:	chr12:37123209-37123390 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	144
Alignm E-value:	7e-33
Alignm gaps (pig, cow):	31, 146
Conread position:	1-186
Cow position:	chr12:5134835-5135033 (view UCSC Genome Browser custom track)
Alignm length:	200
Alignm identity:	146
Alignm E-value:	9e-25
Alignm gaps (pig, cow):	36, 162
Conread position:	1-198
Cow position:	chr12:19420236-19420029 (view UCSC Genome Browser custom track)
Alignm length:	208
Alignm identity:	159
Alignm E-value:	3e-36
Alignm gaps (pig, cow):	31, 0
Conread position:	1-201
Cow position:	chr12:15231985-15232191 (view UCSC Genome Browser custom track)
Alignm length:	209
Alignm identity:	148
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	56, 97
Conread position:	1-209
Cow position:	chr12:42061375-42061596 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	152
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	62, 0
Conread position:	1-211
Cow position:	chr12:46143517-46143739 (view UCSC Genome Browser custom track)
Alignm length:	223
Alignm identity:	165
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	36, 0
Conread position:	1-212
Cow position:	chr12:3568643-3568861 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	156
Alignm E-value:	9e-24
Alignm gaps (pig, cow):	36, 16
Conread position:	1-215
Cow position:	chr12:19872134-19872346 (view UCSC Genome Browser custom track)
Alignm length:	225
Alignm identity:	168
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	35, 88
Conread position:	1-222
Cow position:	chr12:44014144-44013910 (view UCSC Genome Browser custom track)
Alignm length:	237
Alignm identity:	164
Alignm E-value:	7e-22
Alignm gaps (pig, cow):	26, 176
Conread position:	1-225
Cow position:	chr12:9414070-9413853 (view UCSC Genome Browser custom track)
Alignm length:	227
Alignm identity:	156
Alignm E-value:	8e-23
Alignm gaps (pig, cow):	191, 26
Conread position:	1-229
Cow position:	chr12:17472524-17472293 (view UCSC Genome Browser custom track)
Alignm length:	239
Alignm identity:	175
Alignm E-value:	6e-31
Alignm gaps (pig, cow):	31, 100
Conread position:	1-261
Cow position:	chr12:44766779-44767037 (view UCSC Genome Browser custom track)
Alignm length:	270
Alignm identity:	192
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	28, 113
Conread position:	1-275
Cow position:	chr12:38041058-38040783 (view UCSC Genome Browser custom track)
Alignm length:	282
Alignm identity:	189
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	37, 74
Conread position:	1-276
Cow position:	chr12:24440508-24440791 (view UCSC Genome Browser custom track)
Alignm length:	293
Alignm identity:	208
Alignm E-value:	7e-32
Alignm gaps (pig, cow):	37, 74
Conread position:	1-289
Cow position:	chr12:4116201-4116478 (view UCSC Genome Browser custom track)
Alignm length:	289
Alignm identity:	207
Alignm E-value:	6.00036e-42
Alignm gaps (pig, cow):	76, 0
Conread position:	1-316
Cow position:	chr12:941327-941657 (view UCSC Genome Browser custom track)
Alignm length:	333
Alignm identity:	234
Alignm E-value:	2e-40
Alignm gaps (pig, cow):	7, 19