Cow genome map
| Conread name: | Ss1.1-rsto212_a18.5 | 
| Conread position: | 1-140 | 
| Cow position: | chr3:57022286-57022428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 56, 105 | 
| Conread position: | 1-142 | 
| Cow position: | chr3:83988192-83988340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 36, 97 | 
| Conread position: | 1-146 | 
| Cow position: | chr3:3776745-3776902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 1-146 | 
| Cow position: | chr3:75143321-75143168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 1-152 | 
| Cow position: | chr3:6403008-6403165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 27, 109 | 
| Conread position: | 1-161 | 
| Cow position: | chr3:84153036-84153203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 36, 159 | 
| Conread position: | 1-179 | 
| Cow position: | chr3:14280555-14280743 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 1-179 | 
| Cow position: | chr3:79905201-79905022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 83, 36 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:31771411-31771596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 62, 36 | 
| Conread position: | 1-186 | 
| Cow position: | chr3:14717525-14717713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 86, 50 | 
| Conread position: | 1-191 | 
| Cow position: | chr3:77276693-77276499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 56, 111 | 
| Conread position: | 1-197 | 
| Cow position: | chr3:54808870-54809074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 1-198 | 
| Cow position: | chr3:68514838-68514647 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 56, 100 | 
| Conread position: | 1-204 | 
| Cow position: | chr3:58158753-58158546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 60, 24 | 
| Conread position: | 1-205 | 
| Cow position: | chr3:18763605-18763820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 34, 100 | 
| Conread position: | 1-205 | 
| Cow position: | chr3:79148565-79148345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 1-207 | 
| Cow position: | chr3:8159666-8159880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 1-207 | 
| Cow position: | chr3:56102149-56102362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 27, 161 | 
| Conread position: | 1-211 | 
| Cow position: | chr3:8716958-8717182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 1-211 | 
| Cow position: | chr3:31501064-31501280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 44, 155 | 
| Conread position: | 1-212 | 
| Cow position: | chr3:18458945-18458729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 36, 155 | 
| Conread position: | 1-212 | 
| Cow position: | chr3:19198392-19198601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 38, 155 | 
| Conread position: | 1-212 | 
| Cow position: | chr3:23277834-23277612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 31, 125 | 
| Conread position: | 1-212 | 
| Cow position: | chr3:27285936-27286163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 31, 152 | 
| Conread position: | 1-212 | 
| Cow position: | chr3:58951332-58951546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 35, 160 | 
| Conread position: | 1-212 | 
| Cow position: | chr3:61361125-61361337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 26, 51 | 
| Conread position: | 1-215 | 
| Cow position: | chr3:11949642-11949422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 36, 155 | 
| Conread position: | 1-215 | 
| Cow position: | chr3:74699684-74699461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 36, 169 | 
| Conread position: | 1-216 | 
| Cow position: | chr3:23944808-23945032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 36, 173 | 
| Conread position: | 1-216 | 
| Cow position: | chr3:38497663-38497878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 61, 132 | 
| Conread position: | 1-216 | 
| Cow position: | chr3:66978554-66978771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 33, 152 | 
| Conread position: | 1-217 | 
| Cow position: | chr3:522436-522642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 1-222 | 
| Cow position: | chr3:2483164-2483387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 35, 90 | 
| Conread position: | 1-222 | 
| Cow position: | chr3:49218596-49218373 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 62, 78 | 
| Conread position: | 1-251 | 
| Cow position: | chr3:31903397-31903143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 60, 35 | 
| Conread position: | 1-258 | 
| Cow position: | chr3:49454943-49455216 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 24, 245 | 
| Conread position: | 1-269 | 
| Cow position: | chr3:7408194-7408471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 37, 229 | 
| Conread position: | 1-273 | 
| Cow position: | chr3:11019829-11020105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 37, 227 | 
| Conread position: | 1-273 | 
| Cow position: | chr3:61678402-61678692 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 36, 119 | 
| Conread position: | 1-274 | 
| Cow position: | chr3:9843295-9843575 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 55, 161 | 
| Conread position: | 1-274 | 
| Cow position: | chr3:78894603-78894337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 36, 90 | 
| Conread position: | 1-275 | 
| Cow position: | chr3:4332075-4332354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 37, 5 | 
| Conread position: | 1-275 | 
| Cow position: | chr3:8147952-8147678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 45, 36 | 
| Conread position: | 1-275 | 
| Cow position: | chr3:30358923-30358644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 36, 107 | 
| Conread position: | 1-275 | 
| Cow position: | chr3:48530349-48530625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 39, 14 | 
| Conread position: | 1-275 | 
| Cow position: | chr3:70333762-70333492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 57, 35 | 
| Conread position: | 1-275 | 
| Cow position: | chr3:80082106-80081824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 27, 45 | 
| Conread position: | 1-276 | 
| Cow position: | chr3:6265218-6265507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 36, 220 | 
| Conread position: | 1-277 | 
| Cow position: | chr3:78200978-78201259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 36, 161 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:11026637-11026911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 37, 133 | 
| Conread position: | 1-307 | 
| Cow position: | chr3:45523975-45524289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 33, 101 | 
| Conread position: | 1-316 | 
| Cow position: | chr3:33698432-33698762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 27, 243 | 
| Conread position: | 1-318 | 
| Cow position: | chr3:5851216-5850896 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 56, 160 | 
| Conread position: | 1-323 | 
| Cow position: | chr3:57457518-57457846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 37, 126 | 
| Conread position: | 1-328 | 
| Cow position: | chr3:38870445-38870778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 39, 237 | 
| Conread position: | 1-338 | 
| Cow position: | chr3:31047231-31046899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 35, 51 | 
| Conread position: | 1-338 | 
| Cow position: | chr3:72018834-72019169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 58, 27 | 
| Conread position: | 1-342 | 
| Cow position: | chr3:66610127-66609787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 85 | 
| Conread position: | 1-346 | 
| Cow position: | chr3:75727878-75727521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 42, 239 | 
| Conread position: | 1-352 | 
| Cow position: | chr3:13517444-13517090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 37, 99 | 
| Conread position: | 1-357 | 
| Cow position: | chr3:15685199-15684849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 33, 57 | 
| Conread position: | 1-358 | 
| Cow position: | chr3:68042734-68042370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 35, 147 | 
| Conread position: | 1-360 | 
| Cow position: | chr3:27289648-27290015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 27, 150 | 
| Conread position: | 1-364 | 
| Cow position: | chr3:56658-56298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 57, 31 | 
| Conread position: | 1-364 | 
| Cow position: | chr3:58969181-58968824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 56, 27 | 
| Conread position: | 1-365 | 
| Cow position: | chr3:72675798-72676171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 162 | 
| Conread position: | 1-366 | 
| Cow position: | chr3:5096914-5097288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 112 | 
| Conread position: | 1-371 | 
| Cow position: | chr3:59101546-59101913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 43, 80 | 
| Conread position: | 1-374 | 
| Cow position: | chr3:20471645-20471276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 59, 13 | 
| Conread position: | 1-374 | 
| Cow position: | chr3:66708364-66707978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 16, 158 | 
| Conread position: | 1-377 | 
| Cow position: | chr3:37599705-37599336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 36, 135 | 
| Conread position: | 1-377 | 
| Cow position: | chr3:53112879-53113267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 163 | 
| Conread position: | 1-377 | 
| Cow position: | chr3:62826912-62826527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 36, 161 | 
| Conread position: | 1-378 | 
| Cow position: | chr3:5101049-5100679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 31, 45 | 
| Conread position: | 1-378 | 
| Cow position: | chr3:58767000-58767356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 115, 36 | 
| Conread position: | 1-379 | 
| Cow position: | chr3:55272329-55271951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 24 | 
| Conread position: | 1-380 | 
| Cow position: | chr3:83816082-83815693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 33, 146 | 
| Conread position: | 1-381 | 
| Cow position: | chr3:2216071-2216464 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 226 | 
| Conread position: | 1-381 | 
| Cow position: | chr3:33327418-33327805 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 55, 36 | 
| Conread position: | 1-382 | 
| Cow position: | chr3:14626439-14626053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 36 | 
| Conread position: | 1-382 | 
| Cow position: | chr3:51604896-51604518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 25, 193 | 
| Conread position: | 1-385 | 
| Cow position: | chr3:42423620-42423228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 118 | 
| Conread position: | 1-389 | 
| Cow position: | chr3:80053823-80053440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 90 | 
| Conread position: | 1-392 | 
| Cow position: | chr3:14263103-14263499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 242 | 
| Conread position: | 1-392 | 
| Cow position: | chr3:79592178-79591784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 33, 228 | 
| Conread position: | 1-394 | 
| Cow position: | chr3:2007985-2008359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 59, 23 | 
| Conread position: | 1-397 | 
| Cow position: | chr3:80581382-80581767 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 107 | 
| Conread position: | 1-401 | 
| Cow position: | chr3:59588230-59588629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 36, 159 | 
| Conread position: | 1-404 | 
| Cow position: | chr3:72169010-72168611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 44, 132 | 
| Conread position: | 1-404 | 
| Cow position: | chr3:81371367-81371767 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 31, 73 | 
| Conread position: | 1-417 | 
| Cow position: | chr3:28898511-28898090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 222 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:70566027-70565599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 159 | 
| Conread position: | 1-425 | 
| Cow position: | chr3:6689702-6690140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 236 | 
| Conread position: | 1-425 | 
| Cow position: | chr3:54959902-54960303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 55, 117 | 
| Conread position: | 1-425 | 
| Cow position: | chr3:77271557-77271141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 27, 108 | 
| Conread position: | 1-429 | 
| Cow position: | chr3:53573039-53572608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 111 | 
| Conread position: | 1-440 | 
| Cow position: | chr3:18184779-18185229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 230 | 
| Conread position: | 1-444 | 
| Cow position: | chr3:55117261-55116821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 27, 228 | 
| Conread position: | 1-446 | 
| Cow position: | chr3:74600828-74601270 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 32, 117 | 
| Conread position: | 1-448 | 
| Cow position: | chr3:11987041-11987488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 118 | 
| Conread position: | 1-450 | 
| Cow position: | chr3:7566708-7566259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 119 | 
| Conread position: | 1-451 | 
| Cow position: | chr3:2036009-2036467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 237 | 
| Conread position: | 1-457 | 
| Cow position: | chr3:49678833-49679303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 476 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 261 | 
| Conread position: | 1-457 | 
| Cow position: | chr3:58540819-58540348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 36 | 
| Conread position: | 1-458 | 
| Cow position: | chr3:45647388-45647836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 18 | 
| Conread position: | 1-458 | 
| Cow position: | chr3:63179579-63180034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 107 | 
| Conread position: | 1-459 | 
| Cow position: | chr3:23471757-23471292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 166 | 
| Conread position: | 1-459 | 
| Cow position: | chr3:53150038-53150504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 139 | 
| Conread position: | 1-460 | 
| Cow position: | chr3:62999290-62998823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 58, 23 | 
| Conread position: | 1-461 | 
| Cow position: | chr3:15786274-15786741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 44, 223 | 
| Conread position: | 1-462 | 
| Cow position: | chr3:17710048-17710511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 37, 107 | 
| Conread position: | 1-462 | 
| Cow position: | chr3:65413564-65413092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 77 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:3985041-3985492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 118 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:5365397-5365840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 64 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:9641275-9641730 (view UCSC Genome Browser custom track) | 
| Alignm length: | 476 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 156 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:13330061-13329618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 116 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:15158752-15159204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 160 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:16752536-16752079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 152 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:17695295-17694827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 206 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:17937128-17936672 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 159 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:17957178-17957636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 99 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:20129652-20130112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 225 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:24852876-24852414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 159 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:25690499-25690975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 486 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 19 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:31298449-31297982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 31, 229 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:48362794-48363244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 143 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:49119321-49118855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 245 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:56582554-56583023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 155 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:57754769-57754300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 23 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:59333486-59333934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 27, 56 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:59392396-59391950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 36 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:61857207-61857683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 244 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:79884775-79884305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 224 | 
| Conread position: | 1-463 | 
| Cow position: | chr3:83474460-83474929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 29 | 
| Conread position: | 1-464 | 
| Cow position: | chr3:72776951-72777409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 154 | 
| Conread position: | 1-464 | 
| Cow position: | chr3:75050909-75050447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 135 | 
| Conread position: | 1-466 | 
| Cow position: | chr3:55970218-55970693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 34 | 
| Conread position: | 1-471 | 
| Cow position: | chr3:11254441-11253982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 486 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 54 | 
| Conread position: | 1-473 | 
| Cow position: | chr3:10958517-10958059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 117 | 
| Conread position: | 1-473 | 
| Cow position: | chr3:14465993-14465530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 151 | 
| Conread position: | 1-473 | 
| Cow position: | chr3:21112910-21112457 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 39, 59 | 
| Conread position: | 1-473 | 
| Cow position: | chr3:30463455-30462991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 157 | 
| Conread position: | 1-473 | 
| Cow position: | chr3:31309643-31309169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 349 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 14 | 
| Conread position: | 1-473 | 
| Cow position: | chr3:57577410-57577881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 488 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 22 | 
| Conread position: | 1-473 | 
| Cow position: | chr3:71497435-71496942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 129 | 
| Conread position: | 1-473 | 
| Cow position: | chr3:78076900-78077375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 164 | 
| Conread position: | 1-474 | 
| Cow position: | chr3:39066044-39066517 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 36, 116 | 
| Conread position: | 1-474 | 
| Cow position: | chr3:45184134-45183635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 509 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 55, 99 | 
| Conread position: | 1-474 | 
| Cow position: | chr3:48241332-48241790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 118 | 
| Conread position: | 1-477 | 
| Cow position: | chr3:35299385-35299876 (view UCSC Genome Browser custom track) | 
| Alignm length: | 507 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 30, 103 | 
| Conread position: | 1-477 | 
| Cow position: | chr3:78946128-78945632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 511 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 161 | 
| Conread position: | 1-478 | 
| Cow position: | chr3:23169359-23168876 (view UCSC Genome Browser custom track) | 
| Alignm length: | 493 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 159 | 
| Conread position: | 1-478 | 
| Cow position: | chr3:29812955-29813415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 488 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 157 | 
| Conread position: | 1-478 | 
| Cow position: | chr3:31056291-31055823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 493 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 31, 179 | 
| Conread position: | 1-478 | 
| Cow position: | chr3:51033056-51033563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 510 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 209 | 
| Conread position: | 1-478 | 
| Cow position: | chr3:70895757-70896225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 161 | 
| Conread position: | 1-478 | 
| Cow position: | chr3:80071828-80072336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 513 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 166 | 
| Conread position: | 1-479 | 
| Cow position: | chr3:210033-210511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 490 | 
| Alignm identity: | 361 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 102 | 
| Conread position: | 1-479 | 
| Cow position: | chr3:3032109-3032600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 499 | 
| Alignm identity: | 362 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 34 | 
| Conread position: | 1-479 | 
| Cow position: | chr3:15229108-15228649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 490 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 85 | 
| Conread position: | 1-479 | 
| Cow position: | chr3:48252608-48253069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 44 | 
| Conread position: | 1-479 | 
| Cow position: | chr3:68586749-68587209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 486 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 63 | 
| Conread position: | 1-479 | 
| Cow position: | chr3:68647871-68648369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 505 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 227 | 
| Conread position: | 1-479 | 
| Cow position: | chr3:70675928-70676422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 502 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 228 | 
| Conread position: | 1-480 | 
| Cow position: | chr3:174644-175137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 510 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 62, 25 | 
| Conread position: | 1-480 | 
| Cow position: | chr3:8591632-8591176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 31, 41 | 
| Conread position: | 1-480 | 
| Cow position: | chr3:9663476-9662975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 508 | 
| Alignm identity: | 363 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 205 | 
| Conread position: | 1-480 | 
| Cow position: | chr3:15954366-15953891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 121 | 
| Conread position: | 1-480 | 
| Cow position: | chr3:16547387-16547862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 152 | 
| Conread position: | 1-480 | 
| Cow position: | chr3:48852255-48851775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 44 | 
| Conread position: | 1-480 | 
| Cow position: | chr3:53270537-53271029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 497 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 237 | 
| Conread position: | 1-480 | 
| Cow position: | chr3:53909825-53910298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 21 | 
| Conread position: | 1-480 | 
| Cow position: | chr3:54050308-54049838 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 176 | 
| Conread position: | 1-480 | 
| Cow position: | chr3:61539507-61539990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 497 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 246 | 
| Conread position: | 1-480 | 
| Cow position: | chr3:72473618-72474112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 226 | 
| Conread position: | 1-480 | 
| Cow position: | chr3:77188157-77188630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 490 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 27 | 
| Conread position: | 2-211 | 
| Cow position: | chr3:364507-364282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 2-215 | 
| Cow position: | chr3:33633174-33632958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 35, 19 | 
| Conread position: | 2-222 | 
| Cow position: | chr3:22872340-22872106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 2-242 | 
| Cow position: | chr3:82359765-82360003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 44, 12 | 
| Conread position: | 2-276 | 
| Cow position: | chr3:48269575-48269855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 29, 160 | 
| Conread position: | 2-348 | 
| Cow position: | chr3:37451781-37452131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 30, 90 | 
| Conread position: | 2-356 | 
| Cow position: | chr3:20437933-20437585 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 54, 95 | 
| Conread position: | 2-374 | 
| Cow position: | chr3:12255192-12255567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 35, 73 | 
| Conread position: | 2-374 | 
| Cow position: | chr3:55085474-55085081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 251 | 
| Conread position: | 2-375 | 
| Cow position: | chr3:82460895-82461269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 89 | 
| Conread position: | 2-382 | 
| Cow position: | chr3:64172157-64172538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 35, 153 | 
| Conread position: | 2-387 | 
| Cow position: | chr3:3738203-3738583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 46, 34 | 
| Conread position: | 2-397 | 
| Cow position: | chr3:50762837-50763233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 49, 35 | 
| Conread position: | 2-397 | 
| Cow position: | chr3:52863471-52863071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 45 | 
| Conread position: | 2-404 | 
| Cow position: | chr3:17935211-17934818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 89 | 
| Conread position: | 2-418 | 
| Cow position: | chr3:12712211-12711781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 252 | 
| Conread position: | 2-423 | 
| Cow position: | chr3:45534589-45534159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 10, 161 | 
| Conread position: | 2-425 | 
| Cow position: | chr3:4031680-4032104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 35, 158 | 
| Conread position: | 2-425 | 
| Cow position: | chr3:61323064-61323471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 35, 64 | 
| Conread position: | 2-449 | 
| Cow position: | chr3:24549122-24548673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 10, 71 | 
| Conread position: | 2-455 | 
| Cow position: | chr3:17222433-17221966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 6, 160 | 
| Conread position: | 2-459 | 
| Cow position: | chr3:52418677-52419118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 32, 73 | 
| Conread position: | 2-463 | 
| Cow position: | chr3:80740290-80740728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 56, 22 | 
| Conread position: | 2-464 | 
| Cow position: | chr3:75479724-75480174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 97 | 
| Conread position: | 2-466 | 
| Cow position: | chr3:49382664-49383149 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 117 | 
| Conread position: | 2-468 | 
| Cow position: | chr3:33253166-33252712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 26 | 
| Conread position: | 2-470 | 
| Cow position: | chr3:22676372-22675926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 103 | 
| Conread position: | 2-471 | 
| Cow position: | chr3:18393668-18393217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 26 | 
| Conread position: | 2-471 | 
| Cow position: | chr3:48566955-48566506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 32, 105 | 
| Conread position: | 2-473 | 
| Cow position: | chr3:20802917-20802455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 487 | 
| Alignm identity: | 359 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 244 | 
| Conread position: | 2-476 | 
| Cow position: | chr3:76138200-76138651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 97 | 
| Conread position: | 2-478 | 
| Cow position: | chr3:46341173-46341674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 510 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 80 | 
| Conread position: | 2-480 | 
| Cow position: | chr3:64716733-64717191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 11, 166 | 
| Conread position: | 2-480 | 
| Cow position: | chr3:67744916-67744452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 31, 162 | 
| Conread position: | 3-449 | 
| Cow position: | chr3:70334990-70334531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 80 | 
| Conread position: | 3-459 | 
| Cow position: | chr3:71161507-71161959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 231 | 
| Conread position: | 3-468 | 
| Cow position: | chr3:8393059-8393519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 232 | 
| Conread position: | 3-480 | 
| Cow position: | chr3:80564677-80565153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 5 | 
| Conread position: | 4-145 | 
| Cow position: | chr3:48900788-48900639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 4-146 | 
| Cow position: | chr3:60389358-60389499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 80, 46 | 
| Conread position: | 4-154 | 
| Cow position: | chr3:50329361-50329201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 4-160 | 
| Cow position: | chr3:76092000-76092163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 53, 145 | 
| Conread position: | 4-164 | 
| Cow position: | chr3:8901135-8901300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 28, 152 | 
| Conread position: | 4-164 | 
| Cow position: | chr3:13118063-13118233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 56, 27 | 
| Conread position: | 4-177 | 
| Cow position: | chr3:33693363-33693544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 34, 141 | 
| Conread position: | 4-179 | 
| Cow position: | chr3:24639304-24639489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 56, 33 | 
| Conread position: | 4-186 | 
| Cow position: | chr3:83369036-83369220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 28, 99 | 
| Conread position: | 4-199 | 
| Cow position: | chr3:61467323-61467525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 55, 20 | 
| Conread position: | 4-205 | 
| Cow position: | chr3:68342540-68342329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 24, 70 | 
| Conread position: | 4-206 | 
| Cow position: | chr3:51609530-51609746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 4-207 | 
| Cow position: | chr3:53222928-53222715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 4-209 | 
| Cow position: | chr3:18854807-18855023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 4-209 | 
| Cow position: | chr3:56704823-56704616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 33, 87 | 
| Conread position: | 4-215 | 
| Cow position: | chr3:83934228-83934444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 28, 156 | 
| Conread position: | 4-216 | 
| Cow position: | chr3:16157395-16157615 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 53, 166 | 
| Conread position: | 4-217 | 
| Cow position: | chr3:44623183-44622949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 52, 34 | 
| Conread position: | 4-217 | 
| Cow position: | chr3:77227032-77227258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 32, 157 | 
| Conread position: | 4-225 | 
| Cow position: | chr3:49787124-49787357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 19, 215 | 
| Conread position: | 4-226 | 
| Cow position: | chr3:35975391-35975162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 31, 152 | 
| Conread position: | 4-238 | 
| Cow position: | chr3:70468089-70467870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 53, 98 | 
| Conread position: | 4-239 | 
| Cow position: | chr3:45691151-45690914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 51, 36 | 
| Conread position: | 4-241 | 
| Cow position: | chr3:26894382-26894619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 28, 44 | 
| Conread position: | 4-261 | 
| Cow position: | chr3:67161646-67161919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 53, 242 | 
| Conread position: | 4-265 | 
| Cow position: | chr3:21341249-21340979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 30, 19 | 
| Conread position: | 4-273 | 
| Cow position: | chr3:45312768-45313037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 54, 115 | 
| Conread position: | 4-276 | 
| Cow position: | chr3:3164782-3164505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 30, 222 | 
| Conread position: | 4-276 | 
| Cow position: | chr3:41367269-41366990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 150 | 
| Conread position: | 4-315 | 
| Cow position: | chr3:66375035-66375349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 28, 87 | 
| Conread position: | 4-334 | 
| Cow position: | chr3:71430497-71430155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 33, 8 | 
| Conread position: | 4-337 | 
| Cow position: | chr3:65800309-65800637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 52, 27 | 
| Conread position: | 4-338 | 
| Cow position: | chr3:73759805-73759464 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 155 | 
| Conread position: | 4-371 | 
| Cow position: | chr3:26920611-26920996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 33, 42 | 
| Conread position: | 4-377 | 
| Cow position: | chr3:36672291-36671903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 28, 236 | 
| Conread position: | 4-378 | 
| Cow position: | chr3:26219347-26218960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 30, 37 | 
| Conread position: | 4-378 | 
| Cow position: | chr3:38691692-38691314 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 9, 123 | 
| Conread position: | 4-378 | 
| Cow position: | chr3:49650094-49650481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 230 | 
| Conread position: | 4-381 | 
| Cow position: | chr3:52017474-52017867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 56, 24 | 
| Conread position: | 4-383 | 
| Cow position: | chr3:34270645-34271012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 82 | 
| Conread position: | 4-387 | 
| Cow position: | chr3:79292548-79292929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 114 | 
| Conread position: | 4-388 | 
| Cow position: | chr3:4049927-4050296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 147, 31 | 
| Conread position: | 4-388 | 
| Cow position: | chr3:73443373-73442993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 157 | 
| Conread position: | 4-390 | 
| Cow position: | chr3:56059521-56059918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 160 | 
| Conread position: | 4-392 | 
| Cow position: | chr3:67704254-67704651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 159 | 
| Conread position: | 4-403 | 
| Cow position: | chr3:15655434-15655028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 52, 24 | 
| Conread position: | 4-413 | 
| Cow position: | chr3:31206586-31207004 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 213 | 
| Conread position: | 4-434 | 
| Cow position: | chr3:72390799-72391234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 23 | 
| Conread position: | 4-447 | 
| Cow position: | chr3:16656754-16656326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 24, 76 | 
| Conread position: | 4-452 | 
| Cow position: | chr3:59001031-59000599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 103 | 
| Conread position: | 4-455 | 
| Cow position: | chr3:72129-72587 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 33, 151 | 
| Conread position: | 4-458 | 
| Cow position: | chr3:7678387-7678835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 59, 35 | 
| Conread position: | 4-459 | 
| Cow position: | chr3:26903829-26904270 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 192 | 
| Conread position: | 4-459 | 
| Cow position: | chr3:54434688-54435139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 153 | 
| Conread position: | 4-459 | 
| Cow position: | chr3:68146107-68145684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 33 | 
| Conread position: | 4-459 | 
| Cow position: | chr3:74533062-74533505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 158 | 
| Conread position: | 4-461 | 
| Cow position: | chr3:2537968-2538410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 59, 33 | 
| Conread position: | 4-461 | 
| Cow position: | chr3:59596918-59597346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 86 | 
| Conread position: | 4-461 | 
| Cow position: | chr3:64281222-64280765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 159 | 
| Conread position: | 4-462 | 
| Cow position: | chr3:80202321-80202792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 33, 197 | 
| Conread position: | 4-463 | 
| Cow position: | chr3:2024898-2025378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 109 | 
| Conread position: | 4-463 | 
| Cow position: | chr3:2393252-2392794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 476 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 119 | 
| Conread position: | 4-463 | 
| Cow position: | chr3:24939511-24939047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 61, 214 | 
| Conread position: | 4-463 | 
| Cow position: | chr3:28908481-28908041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 111 | 
| Conread position: | 4-463 | 
| Cow position: | chr3:45881621-45882074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 159 | 
| Conread position: | 4-463 | 
| Cow position: | chr3:53588676-53588213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 476 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 33, 148 | 
| Conread position: | 4-463 | 
| Cow position: | chr3:53592986-53592511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 41 | 
| Conread position: | 4-463 | 
| Cow position: | chr3:65968869-65969349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 259 | 
| Conread position: | 4-466 | 
| Cow position: | chr3:35884239-35883754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 89 | 
| Conread position: | 4-468 | 
| Cow position: | chr3:23735388-23734909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 133 | 
| Conread position: | 4-468 | 
| Cow position: | chr3:53790830-53790362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 161 | 
| Conread position: | 4-470 | 
| Cow position: | chr3:14601999-14601530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 233 | 
| Conread position: | 4-472 | 
| Cow position: | chr3:53384569-53384096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 169 | 
| Conread position: | 4-473 | 
| Cow position: | chr3:7763377-7763845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 175 | 
| Conread position: | 4-473 | 
| Cow position: | chr3:18459806-18459351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 121 | 
| Conread position: | 4-473 | 
| Cow position: | chr3:54782298-54781807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 502 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 97 | 
| Conread position: | 4-473 | 
| Cow position: | chr3:65236739-65237206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 91 | 
| Conread position: | 4-474 | 
| Cow position: | chr3:83455434-83454973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 56, 23 | 
| Conread position: | 4-477 | 
| Cow position: | chr3:18066848-18067319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 486 | 
| Alignm identity: | 361 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 156 | 
| Conread position: | 4-477 | 
| Cow position: | chr3:20663824-20663353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 224 | 
| Conread position: | 4-478 | 
| Cow position: | chr3:59648973-59649445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 42 | 
| Conread position: | 4-478 | 
| Cow position: | chr3:76172948-76172492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 486 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 176 | 
| Conread position: | 4-480 | 
| Cow position: | chr3:1830849-1830384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 89 | 
| Conread position: | 4-480 | 
| Cow position: | chr3:2518823-2518344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 168 | 
| Conread position: | 4-480 | 
| Cow position: | chr3:24872457-24872885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 183, 24 | 
| Conread position: | 4-480 | 
| Cow position: | chr3:30179796-30180273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 119 | 
| Conread position: | 4-480 | 
| Cow position: | chr3:37041143-37041609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 27 | 
| Conread position: | 4-480 | 
| Cow position: | chr3:66885326-66884835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 503 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 159 | 
| Conread position: | 4-480 | 
| Cow position: | chr3:71246751-71247206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 147, 59 | 
| Conread position: | 4-480 | 
| Cow position: | chr3:79902217-79902688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 146 | 
| Conread position: | 5-182 | 
| Cow position: | chr3:36657055-36656870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 5-208 | 
| Cow position: | chr3:11640149-11640360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 33, 112 | 
| Conread position: | 5-209 | 
| Cow position: | chr3:63945260-63945047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 5-215 | 
| Cow position: | chr3:58286183-58285965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 27, 151 | 
| Conread position: | 5-216 | 
| Cow position: | chr3:82657370-82657150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 26, 113 | 
| Conread position: | 5-266 | 
| Cow position: | chr3:17952371-17952638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 32, 117 | 
| Conread position: | 5-275 | 
| Cow position: | chr3:19789404-19789125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 27, 110 | 
| Conread position: | 5-276 | 
| Cow position: | chr3:59271274-59271533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 31, 45 | 
| Conread position: | 5-291 | 
| Cow position: | chr3:39328127-39328403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 82, 32 | 
| Conread position: | 5-296 | 
| Cow position: | chr3:59514826-59515115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 32, 85 | 
| Conread position: | 5-316 | 
| Cow position: | chr3:69849787-69849480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 29, 99 | 
| Conread position: | 5-335 | 
| Cow position: | chr3:69750986-69750661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 32, 155 | 
| Conread position: | 5-336 | 
| Cow position: | chr3:4457361-4457020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 32, 149 | 
| Conread position: | 5-348 | 
| Cow position: | chr3:75711034-75711369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 73, 64 | 
| Conread position: | 5-355 | 
| Cow position: | chr3:34556506-34556170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 189, 32 | 
| Conread position: | 5-359 | 
| Cow position: | chr3:59366262-59366627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 39, 225 | 
| Conread position: | 5-362 | 
| Cow position: | chr3:61171787-61171430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 29, 43 | 
| Conread position: | 5-371 | 
| Cow position: | chr3:38346916-38347276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 23, 128 | 
| Conread position: | 5-373 | 
| Cow position: | chr3:10347069-10347443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 23, 154 | 
| Conread position: | 5-378 | 
| Cow position: | chr3:61278621-61279001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 27, 227 | 
| Conread position: | 5-380 | 
| Cow position: | chr3:59451310-59451699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 72 | 
| Conread position: | 5-397 | 
| Cow position: | chr3:49230730-49231113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 54, 18 | 
| Conread position: | 5-400 | 
| Cow position: | chr3:48296426-48296814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 54, 32 | 
| Conread position: | 5-417 | 
| Cow position: | chr3:73708769-73709176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 22 | 
| Conread position: | 5-434 | 
| Cow position: | chr3:55010440-55010025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 27, 78 | 
| Conread position: | 5-458 | 
| Cow position: | chr3:55124563-55124115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 158 | 
| Conread position: | 5-462 | 
| Cow position: | chr3:49327659-49328108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 47 | 
| Conread position: | 5-463 | 
| Cow position: | chr3:5374051-5374484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 54, 5 | 
| Conread position: | 5-463 | 
| Cow position: | chr3:49461222-49460751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 243 | 
| Conread position: | 5-463 | 
| Cow position: | chr3:55733658-55734133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 53, 216 | 
| Conread position: | 5-463 | 
| Cow position: | chr3:65058417-65058874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 175 | 
| Conread position: | 5-463 | 
| Cow position: | chr3:71231121-71231573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 70 | 
| Conread position: | 5-474 | 
| Cow position: | chr3:2674744-2675218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 132 | 
| Conread position: | 5-474 | 
| Cow position: | chr3:13899738-13899268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 487 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 235 | 
| Conread position: | 5-474 | 
| Cow position: | chr3:23876713-23877184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 486 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 86 | 
| Conread position: | 5-478 | 
| Cow position: | chr3:54903288-54903758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 490 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 19 | 
| Conread position: | 5-478 | 
| Cow position: | chr3:80973068-80973542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 490 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 175 | 
| Conread position: | 5-480 | 
| Cow position: | chr3:46161130-46160664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 32, 167 | 
| Conread position: | 5-480 | 
| Cow position: | chr3:50768394-50768873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 493 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 155 | 
| Conread position: | 5-480 | 
| Cow position: | chr3:79220564-79221044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 493 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 222 | 
| Conread position: | 6-204 | 
| Cow position: | chr3:53903902-53904102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 32, 150 | 
| Conread position: | 6-217 | 
| Cow position: | chr3:12286951-12287167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 31, 117 | 
| Conread position: | 6-248 | 
| Cow position: | chr3:20155546-20155797 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 56, 245 | 
| Conread position: | 6-262 | 
| Cow position: | chr3:30417845-30418112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 31, 124 | 
| Conread position: | 6-276 | 
| Cow position: | chr3:59267800-59268079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 32, 128 | 
| Conread position: | 6-318 | 
| Cow position: | chr3:43528521-43528199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 31, 149 | 
| Conread position: | 6-355 | 
| Cow position: | chr3:49140331-49139979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 51, 25 | 
| Conread position: | 6-359 | 
| Cow position: | chr3:68583286-68582926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 208 | 
| Conread position: | 6-372 | 
| Cow position: | chr3:35852751-35852384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 49, 139 | 
| Conread position: | 6-374 | 
| Cow position: | chr3:73764477-73764111 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 39 | 
| Conread position: | 6-377 | 
| Cow position: | chr3:29887708-29887328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 87 | 
| Conread position: | 6-379 | 
| Cow position: | chr3:59208530-59208888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 26, 152 | 
| Conread position: | 6-381 | 
| Cow position: | chr3:27532946-27532559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 27, 159 | 
| Conread position: | 6-394 | 
| Cow position: | chr3:46900911-46901303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 157 | 
| Conread position: | 6-443 | 
| Cow position: | chr3:15387927-15388374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 211 | 
| Conread position: | 6-452 | 
| Cow position: | chr3:18497741-18498179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 53, 31 | 
| Conread position: | 6-457 | 
| Cow position: | chr3:29891701-29891237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 227 | 
| Conread position: | 6-459 | 
| Cow position: | chr3:2397067-2396624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 159 | 
| Conread position: | 6-459 | 
| Cow position: | chr3:60597269-60597708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 6 | 
| Conread position: | 6-463 | 
| Cow position: | chr3:31419417-31419870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 106 | 
| Conread position: | 6-463 | 
| Cow position: | chr3:67929550-67929084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 236 | 
| Conread position: | 6-463 | 
| Cow position: | chr3:68708285-68707847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 31 | 
| Conread position: | 6-463 | 
| Cow position: | chr3:68881393-68880956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 31 | 
| Conread position: | 6-472 | 
| Cow position: | chr3:59611000-59610535 (view UCSC Genome Browser custom track) | 
| Alignm length: | 476 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 42 | 
| Conread position: | 6-472 | 
| Cow position: | chr3:73467335-73467811 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 172 | 
| Conread position: | 6-479 | 
| Cow position: | chr3:34096237-34095781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 488 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 22, 12 | 
| Conread position: | 6-480 | 
| Cow position: | chr3:27274256-27274720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 46 | 
| Conread position: | 7-161 | 
| Cow position: | chr3:74849321-74849161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 51, 153 | 
| Conread position: | 7-235 | 
| Cow position: | chr3:51012816-51012580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 7-275 | 
| Cow position: | chr3:5416514-5416231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 22, 200 | 
| Conread position: | 7-313 | 
| Cow position: | chr3:60892350-60892653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 54, 145 | 
| Conread position: | 7-323 | 
| Cow position: | chr3:19708382-19708070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 55, 37 | 
| Conread position: | 7-341 | 
| Cow position: | chr3:39171767-39171430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 30, 153 | 
| Conread position: | 7-404 | 
| Cow position: | chr3:62292399-62292003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 25, 55 | 
| Conread position: | 7-463 | 
| Cow position: | chr3:59473833-59474295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 476 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 20 | 
| Conread position: | 7-477 | 
| Cow position: | chr3:53739474-53738992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 157 | 
| Conread position: | 7-480 | 
| Cow position: | chr3:59604588-59605034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 91 | 
| Conread position: | 7-480 | 
| Cow position: | chr3:83490793-83491272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 236 | 
| Conread position: | 8-182 | 
| Cow position: | chr3:65020052-65020235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 8-211 | 
| Cow position: | chr3:58383686-58383896 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 29, 150 | 
| Conread position: | 8-225 | 
| Cow position: | chr3:11326633-11326411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 29, 157 | 
| Conread position: | 8-271 | 
| Cow position: | chr3:77496535-77496814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 28, 154 | 
| Conread position: | 8-359 | 
| Cow position: | chr3:27546115-27545745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 49, 34 | 
| Conread position: | 8-378 | 
| Cow position: | chr3:70401621-70401989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 147 | 
| Conread position: | 8-397 | 
| Cow position: | chr3:50069498-50069871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 20, 7 | 
| Conread position: | 8-451 | 
| Cow position: | chr3:66901024-66900564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 243 | 
| Conread position: | 8-466 | 
| Cow position: | chr3:14725015-14725494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 486 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 31, 234 | 
| Conread position: | 8-469 | 
| Cow position: | chr3:42594938-42594454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 37, 150 | 
| Conread position: | 8-471 | 
| Cow position: | chr3:20256912-20257403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 17, 415 | 
| Conread position: | 8-474 | 
| Cow position: | chr3:20675161-20674691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 232 | 
| Conread position: | 8-478 | 
| Cow position: | chr3:39970154-39969674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 156 | 
| Conread position: | 8-480 | 
| Cow position: | chr3:14801469-14801936 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 33, 84 | 
| Conread position: | 8-480 | 
| Cow position: | chr3:55190032-55189557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 78 | 
| Conread position: | 9-216 | 
| Cow position: | chr3:83920917-83921132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 28, 186 | 
| Conread position: | 9-418 | 
| Cow position: | chr3:81471381-81470962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 227 | 
| Conread position: | 9-463 | 
| Cow position: | chr3:77365575-77365117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 97 | 
| Conread position: | 9-473 | 
| Cow position: | chr3:17456550-17456082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 157 | 
| Conread position: | 9-473 | 
| Cow position: | chr3:55460782-55460296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 497 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 28, 151 | 
| Conread position: | 10-186 | 
| Cow position: | chr3:18607088-18607275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 32, 153 | 
| Conread position: | 10-191 | 
| Cow position: | chr3:34392376-34392189 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 47, 94 | 
| Conread position: | 10-205 | 
| Cow position: | chr3:16004266-16004066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 22, 76 | 
| Conread position: | 10-237 | 
| Cow position: | chr3:23477955-23478181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 28, 147 | 
| Conread position: | 10-276 | 
| Cow position: | chr3:63861181-63860899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 27, 232 | 
| Conread position: | 10-341 | 
| Cow position: | chr3:46350376-46350727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 18, 240 | 
| Conread position: | 10-451 | 
| Cow position: | chr3:53046937-53046495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 115 | 
| Conread position: | 10-463 | 
| Cow position: | chr3:42489586-42489109 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 48, 145 | 
| Conread position: | 10-463 | 
| Cow position: | chr3:75570721-75570271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 79 | 
| Conread position: | 10-472 | 
| Cow position: | chr3:75158085-75158537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 84 | 
| Conread position: | 10-473 | 
| Cow position: | chr3:14552598-14553057 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 149 | 
| Conread position: | 10-473 | 
| Cow position: | chr3:57763943-57764398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 153 | 
| Conread position: | 10-478 | 
| Cow position: | chr3:38863833-38864311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 26, 102 | 
| Conread position: | 10-479 | 
| Cow position: | chr3:49482984-49482524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 27 | 
| Conread position: | 11-182 | 
| Cow position: | chr3:61262524-61262703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 26, 147 | 
| Conread position: | 11-216 | 
| Cow position: | chr3:42588070-42588292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 11-233 | 
| Cow position: | chr3:13577459-13577237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 52, 12 | 
| Conread position: | 11-274 | 
| Cow position: | chr3:49731916-49731651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 46, 107 | 
| Conread position: | 11-275 | 
| Cow position: | chr3:42483621-42483897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 22, 204 | 
| Conread position: | 11-378 | 
| Cow position: | chr3:57624184-57624557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 106 | 
| Conread position: | 11-434 | 
| Cow position: | chr3:44101702-44102113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 54 | 
| Conread position: | 11-451 | 
| Cow position: | chr3:82056396-82055965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 48, 233 | 
| Conread position: | 11-454 | 
| Cow position: | chr3:63507539-63507091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 13, 108 | 
| Conread position: | 11-463 | 
| Cow position: | chr3:13353081-13353539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 52, 26 | 
| Conread position: | 11-466 | 
| Cow position: | chr3:36570329-36569860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 212 | 
| Conread position: | 11-468 | 
| Cow position: | chr3:53221740-53222192 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 145 | 
| Conread position: | 11-480 | 
| Cow position: | chr3:78443842-78443382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 212 | 
| Conread position: | 12-217 | 
| Cow position: | chr3:42367767-42367566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 25, 46 | 
| Conread position: | 12-447 | 
| Cow position: | chr3:68627953-68627528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 22, 62 | 
| Conread position: | 12-462 | 
| Cow position: | chr3:74233922-74234355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 24 | 
| Conread position: | 12-468 | 
| Cow position: | chr3:68303050-68303498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 25, 79 | 
| Conread position: | 12-477 | 
| Cow position: | chr3:32584880-32585342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 476 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 96 | 
| Conread position: | 12-480 | 
| Cow position: | chr3:73961957-73961502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 89 | 
| Conread position: | 13-466 | 
| Cow position: | chr3:73394843-73395293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 15 | 
| Conread position: | 13-468 | 
| Cow position: | chr3:23408619-23408184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 54 | 
| Conread position: | 14-222 | 
| Cow position: | chr3:5899550-5899764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 48, 103 | 
| Conread position: | 14-242 | 
| Cow position: | chr3:47284562-47284796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 43, 103 | 
| Conread position: | 14-374 | 
| Cow position: | chr3:6873521-6873163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 18, 150 | 
| Conread position: | 14-388 | 
| Cow position: | chr3:57760244-57760601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 41 | 
| Conread position: | 14-463 | 
| Cow position: | chr3:2506755-2506301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 13 | 
| Conread position: | 14-470 | 
| Cow position: | chr3:74499948-74500438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 502 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 285 | 
| Conread position: | 15-358 | 
| Cow position: | chr3:79112654-79112309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 24, 6 | 
| Conread position: | 15-473 | 
| Cow position: | chr3:7331394-7330952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 476 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 14, 150 | 
| Conread position: | 15-479 | 
| Cow position: | chr3:15052212-15051762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 33 | 
| Conread position: | 16-173 | 
| Cow position: | chr3:84368643-84368482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 44, 84 | 
| Conread position: | 16-416 | 
| Cow position: | chr3:75046144-75045742 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 65, 28 | 
| Conread position: | 16-431 | 
| Cow position: | chr3:30055720-30055306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 9, 96 | 
| Conread position: | 16-480 | 
| Cow position: | chr3:54945851-54946313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 29 | 
| Conread position: | 17-225 | 
| Cow position: | chr3:79208276-79208054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 17-373 | 
| Cow position: | chr3:525081-525434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 20, 84 | 
| Conread position: | 17-463 | 
| Cow position: | chr3:63315867-63316302 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 70, 29 | 
| Conread position: | 18-261 | 
| Cow position: | chr3:2903562-2903318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 19, 135 | 
| Conread position: | 18-460 | 
| Cow position: | chr3:45279185-45279641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 14, 192 | 
| Conread position: | 18-463 | 
| Cow position: | chr3:60933143-60933593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 180 | 
| Conread position: | 19-285 | 
| Cow position: | chr3:84000341-84000612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 18, 222 | 
| Conread position: | 20-239 | 
| Cow position: | chr3:54770734-54770966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 18, 200 | 
| Conread position: | 20-268 | 
| Cow position: | chr3:35283367-35283107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 43, 145 | 
| Conread position: | 20-463 | 
| Cow position: | chr3:13302126-13301673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 103 | 
| Conread position: | 20-464 | 
| Cow position: | chr3:44932246-44932688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 28 | 
| Conread position: | 20-472 | 
| Cow position: | chr3:51578591-51578139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 138 | 
| Conread position: | 21-275 | 
| Cow position: | chr3:17451203-17450950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 17, 141 | 
| Conread position: | 21-468 | 
| Cow position: | chr3:14633255-14632800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 35, 128 | 
| Conread position: | 22-240 | 
| Cow position: | chr3:52650797-52650573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 37, 18 | 
| Conread position: | 25-219 | 
| Cow position: | chr3:23269838-23270036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 39, 65 | 
| Conread position: | 25-397 | 
| Cow position: | chr3:67544139-67543758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 13, 214 | 
| Conread position: | 25-480 | 
| Cow position: | chr3:75080502-75080940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 139 | 
| Conread position: | 26-293 | 
| Cow position: | chr3:73590262-73589988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 10, 132 | 
| Conread position: | 26-403 | 
| Cow position: | chr3:73460715-73461084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 37, 81 | 
| Conread position: | 27-275 | 
| Cow position: | chr3:16363002-16362746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 10, 82 | 
| Conread position: | 27-463 | 
| Cow position: | chr3:52652336-52651905 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 94 | 
| Conread position: | 28-261 | 
| Cow position: | chr3:4087427-4087184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 32, 87 | 
| Conread position: | 28-450 | 
| Cow position: | chr3:74119700-74119268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 29 | 
| Conread position: | 28-461 | 
| Cow position: | chr3:52607922-52608354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 136 | 
| Conread position: | 28-461 | 
| Cow position: | chr3:82020105-82019669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 35, 147 | 
| Conread position: | 28-462 | 
| Cow position: | chr3:16333545-16333979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 90 | 
| Conread position: | 28-477 | 
| Cow position: | chr3:43233242-43233692 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 190 | 
| Conread position: | 29-322 | 
| Cow position: | chr3:28692690-28692395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 52, 45 | 
| Conread position: | 29-394 | 
| Cow position: | chr3:2680251-2680622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 28, 209 | 
| Conread position: | 30-343 | 
| Cow position: | chr3:34937587-34937902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 57, 122 | 
| Conread position: | 30-392 | 
| Cow position: | chr3:61143834-61144201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 31, 133 | 
| Conread position: | 30-462 | 
| Cow position: | chr3:22716539-22716103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 27, 127 | 
| Conread position: | 31-212 | 
| Cow position: | chr3:8604272-8604083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 30, 124 | 
| Conread position: | 31-239 | 
| Cow position: | chr3:45307676-45307889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 26, 127 | 
| Conread position: | 31-458 | 
| Cow position: | chr3:7338032-7337617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 129 | 
| Conread position: | 31-461 | 
| Cow position: | chr3:71237899-71238322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 126 | 
| Conread position: | 31-476 | 
| Cow position: | chr3:51234354-51233914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 80 | 
| Conread position: | 31-479 | 
| Cow position: | chr3:30009168-30008715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 25, 147 | 
| Conread position: | 32-327 | 
| Cow position: | chr3:22820312-22820613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 31, 124 | 
| Conread position: | 32-459 | 
| Cow position: | chr3:74088431-74088006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 27, 161 | 
| Conread position: | 32-463 | 
| Cow position: | chr3:3556287-3556723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 17 | 
| Conread position: | 32-468 | 
| Cow position: | chr3:56476425-56476854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 75 | 
| Conread position: | 33-463 | 
| Cow position: | chr3:18686660-18687076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 30, 50 | 
| Conread position: | 34-217 | 
| Cow position: | chr3:48578586-48578767 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 29, 81 | 
| Conread position: | 34-459 | 
| Cow position: | chr3:26970570-26970982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 27, 123 | 
| Conread position: | 35-382 | 
| Cow position: | chr3:18725888-18725546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 20, 109 | 
| Conread position: | 36-436 | 
| Cow position: | chr3:74134459-74134855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 22 | 
| Conread position: | 36-471 | 
| Cow position: | chr3:5045063-5044627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 212 | 
| Conread position: | 37-480 | 
| Cow position: | chr3:81087857-81087442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 10, 47 | 
| Conread position: | 42-348 | 
| Cow position: | chr3:76015058-76015355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 45, 54 | 
| Conread position: | 45-449 | 
| Cow position: | chr3:56612118-56612523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 42, 30 | 
| Conread position: | 52-381 | 
| Cow position: | chr3:26960826-26960492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 35, 183 | 
| Conread position: | 55-215 | 
| Cow position: | chr3:2198654-2198817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 32, 94 | 
| Conread position: | 56-478 | 
| Cow position: | chr3:53875989-53875570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 99 | 
| Conread position: | 56-479 | 
| Cow position: | chr3:68156503-68156918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 31, 104 | 
| Conread position: | 57-203 | 
| Cow position: | chr3:35074455-35074605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 39, 21 | 
| Conread position: | 57-209 | 
| Cow position: | chr3:23215810-23215644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 57-209 | 
| Cow position: | chr3:29334740-29334583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 30, 98 | 
| Conread position: | 57-227 | 
| Cow position: | chr3:4861463-4861629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 30, 94 | 
| Conread position: | 57-228 | 
| Cow position: | chr3:44534993-44534813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 57-265 | 
| Cow position: | chr3:66866626-66866418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 30, 118 | 
| Conread position: | 57-322 | 
| Cow position: | chr3:63332584-63332855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 30, 170 | 
| Conread position: | 57-381 | 
| Cow position: | chr3:15192338-15192676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 27, 147 | 
| Conread position: | 57-397 | 
| Cow position: | chr3:13507237-13507580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 28, 100 | 
| Conread position: | 57-459 | 
| Cow position: | chr3:8060906-8061291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 138, 27 | 
| Conread position: | 57-463 | 
| Cow position: | chr3:22888142-22887751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 30, 46 | 
| Conread position: | 57-463 | 
| Cow position: | chr3:55947349-55947774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 30, 165 | 
| Conread position: | 57-468 | 
| Cow position: | chr3:67930403-67929990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 136, 42 | 
| Conread position: | 57-469 | 
| Cow position: | chr3:15752854-15752439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 135, 39 | 
| Conread position: | 57-472 | 
| Cow position: | chr3:188633-189059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 162 | 
| Conread position: | 57-474 | 
| Cow position: | chr3:39661676-39661268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 46 | 
| Conread position: | 57-480 | 
| Cow position: | chr3:32310665-32310221 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 27, 197 | 
| Conread position: | 59-344 | 
| Cow position: | chr3:11711728-11712024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 28, 179 | 
| Conread position: | 59-397 | 
| Cow position: | chr3:59621861-59621536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 13 | 
| Conread position: | 60-257 | 
| Cow position: | chr3:83201751-83201548 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 27, 98 | 
| Conread position: | 60-348 | 
| Cow position: | chr3:23445113-23444825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 27, 40 | 
| Conread position: | 60-378 | 
| Cow position: | chr3:60265459-60265161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 27, 33 | 
| Conread position: | 60-392 | 
| Cow position: | chr3:43571517-43571855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 27, 186 | 
| Conread position: | 60-393 | 
| Cow position: | chr3:27940351-27940035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 27, 89 | 
| Conread position: | 60-462 | 
| Cow position: | chr3:11896310-11896696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 11, 42 | 
| Conread position: | 60-468 | 
| Cow position: | chr3:17134116-17134511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 27, 41 | 
| Conread position: | 60-480 | 
| Cow position: | chr3:78092733-78092319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 98 | 
| Conread position: | 61-382 | 
| Cow position: | chr3:50614417-50614739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 23, 40 | 
| Conread position: | 61-459 | 
| Cow position: | chr3:83215031-83215440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 174 | 
| Conread position: | 63-284 | 
| Cow position: | chr3:15859891-15859668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 24, 90 | 
| Conread position: | 65-338 | 
| Cow position: | chr3:78896430-78896700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 17, 68 | 
| Conread position: | 66-273 | 
| Cow position: | chr3:3062345-3062555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 21, 44 | 
| Conread position: | 66-463 | 
| Cow position: | chr3:70609405-70609800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 87 | 
| Conread position: | 67-463 | 
| Cow position: | chr3:76713538-76713137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 34 | 
| Conread position: | 68-318 | 
| Cow position: | chr3:35005562-35005809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 19, 83 | 
| Conread position: | 68-438 | 
| Cow position: | chr3:25944862-25945245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 359 | 
| Conread position: | 68-463 | 
| Cow position: | chr3:11063163-11063537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 19, 87 | 
| Conread position: | 68-466 | 
| Cow position: | chr3:31077946-31077547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 51 | 
| Conread position: | 68-473 | 
| Cow position: | chr3:46006246-46005830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 19, 181 | 
| Conread position: | 68-477 | 
| Cow position: | chr3:23105581-23105175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 86 | 
| Conread position: | 68-480 | 
| Cow position: | chr3:15672359-15671962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 20, 73 | 
| Conread position: | 69-225 | 
| Cow position: | chr3:10173349-10173189 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 18, 84 | 
| Conread position: | 69-275 | 
| Cow position: | chr3:25059859-25060069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 18, 169 | 
| Conread position: | 69-344 | 
| Cow position: | chr3:74878804-74878530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 18, 49 | 
| Conread position: | 69-366 | 
| Cow position: | chr3:83845690-83845993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 18, 82 | 
| Conread position: | 70-480 | 
| Cow position: | chr3:4319497-4319911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 102 | 
| Conread position: | 70-480 | 
| Cow position: | chr3:45211082-45211496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 124 | 
| Conread position: | 71-478 | 
| Cow position: | chr3:55319110-55318710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 25 | 
| Conread position: | 72-225 | 
| Cow position: | chr3:55063079-55062925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 72-472 | 
| Cow position: | chr3:26739626-26739240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 74, 11 | 
| Conread position: | 74-360 | 
| Cow position: | chr3:7940767-7940482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 11, 79 | 
| Conread position: | 74-362 | 
| Cow position: | chr3:15904180-15903884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 13, 145 | 
| Conread position: | 74-480 | 
| Cow position: | chr3:49674183-49673783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 13, 83 | 
| Conread position: | 77-480 | 
| Cow position: | chr3:79825121-79824728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 70, 102 | 
| Conread position: | 79-260 | 
| Cow position: | chr3:65380949-65381124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 10, 107 | 
| Conread position: | 79-276 | 
| Cow position: | chr3:59885180-59885383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 79-459 | 
| Cow position: | chr3:61169598-61169981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 20, 9 | 
| Conread position: | 79-463 | 
| Cow position: | chr3:36418668-36418312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 116, 15 | 
| Conread position: | 83-291 | 
| Cow position: | chr3:21693747-21693954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 59, 5 | 
| Conread position: | 83-463 | 
| Cow position: | chr3:67520375-67520001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 63, 34 | 
| Conread position: | 84-463 | 
| Cow position: | chr3:36375742-36375363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 213 | 
| Conread position: | 84-463 | 
| Cow position: | chr3:53095134-53094749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 67, 133 | 
| Conread position: | 84-472 | 
| Cow position: | chr3:61894372-61893998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 47, 155 | 
| Conread position: | 84-478 | 
| Cow position: | chr3:1787749-1788129 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 67, 97 | 
| Conread position: | 86-473 | 
| Cow position: | chr3:38035788-38035402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 136 | 
| Conread position: | 87-480 | 
| Cow position: | chr3:67698084-67698470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 106, 55 | 
| Conread position: | 88-315 | 
| Cow position: | chr3:70631824-70632051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 154, 59 | 
| Conread position: | 88-359 | 
| Cow position: | chr3:3637992-3638252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 104, 147 | 
| Conread position: | 88-382 | 
| Cow position: | chr3:116003-116287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 198, 101 | 
| Conread position: | 88-388 | 
| Cow position: | chr3:15506257-15506552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 198, 65 | 
| Conread position: | 88-394 | 
| Cow position: | chr3:66884135-66883834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 106, 128 | 
| Conread position: | 88-440 | 
| Cow position: | chr3:8565067-8564707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 58, 80 | 
| Conread position: | 88-451 | 
| Cow position: | chr3:74079833-74079475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 104, 63 | 
| Conread position: | 88-454 | 
| Cow position: | chr3:57273872-57274224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 62 | 
| Conread position: | 88-461 | 
| Cow position: | chr3:14598756-14599093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 106, 90 | 
| Conread position: | 88-472 | 
| Cow position: | chr3:27697173-27696780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 131 | 
| Conread position: | 88-480 | 
| Cow position: | chr3:22844720-22845097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 54, 31 | 
| Conread position: | 88-480 | 
| Cow position: | chr3:38828572-38828944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 35, 128 | 
| Conread position: | 88-480 | 
| Cow position: | chr3:55712235-55712622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 299 | 
| Conread position: | 89-478 | 
| Cow position: | chr3:13890274-13890673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 63, 133 | 
| Conread position: | 90-480 | 
| Cow position: | chr3:12705738-12705356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 63 | 
| Conread position: | 93-371 | 
| Cow position: | chr3:34669917-34669647 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 101, 133 | 
| Conread position: | 93-453 | 
| Cow position: | chr3:55434142-55434496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 52, 36 | 
| Conread position: | 93-473 | 
| Cow position: | chr3:63269036-63269418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 99, 41 | 
| Conread position: | 96-401 | 
| Cow position: | chr3:5366586-5366884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 98, 33 | 
| Conread position: | 96-473 | 
| Cow position: | chr3:1453308-1452941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 97, 51 | 
| Conread position: | 96-479 | 
| Cow position: | chr3:75687625-75687246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 145 | 
| Conread position: | 96-480 | 
| Cow position: | chr3:19198801-19199178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 52 | 
| Conread position: | 96-480 | 
| Cow position: | chr3:22232838-22232479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 96, 58 | 
| Conread position: | 97-368 | 
| Cow position: | chr3:74502507-74502242 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 54, 128 | 
| Conread position: | 97-378 | 
| Cow position: | chr3:20678020-20677749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 76, 51 | 
| Conread position: | 97-461 | 
| Cow position: | chr3:54506522-54506879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 58 | 
| Conread position: | 97-463 | 
| Cow position: | chr3:83798024-83797648 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 57, 121 | 
| Conread position: | 97-473 | 
| Cow position: | chr3:54374046-54373672 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 142 | 
| Conread position: | 97-480 | 
| Cow position: | chr3:53318218-53318603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 131 | 
| Conread position: | 100-463 | 
| Cow position: | chr3:15751904-15751548 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 92, 166 | 
| Conread position: | 100-463 | 
| Cow position: | chr3:79092577-79092209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 46, 117 | 
| Conread position: | 100-473 | 
| Cow position: | chr3:59718660-59719035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 93, 116 | 
| Conread position: | 100-480 | 
| Cow position: | chr3:30940632-30940997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 16, 54 | 
| Conread position: | 101-463 | 
| Cow position: | chr3:26981883-26982224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 51, 112 | 
| Conread position: | 101-480 | 
| Cow position: | chr3:35153440-35153799 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 185, 51 | 
| Conread position: | 102-463 | 
| Cow position: | chr3:76268161-76267798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 28 | 
| Conread position: | 102-478 | 
| Cow position: | chr3:75853511-75853145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 49 | 
| Conread position: | 103-243 | 
| Cow position: | chr3:78739676-78739819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 13, 46 | 
| Conread position: | 103-463 | 
| Cow position: | chr3:70762302-70761948 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 50 | 
| Conread position: | 103-479 | 
| Cow position: | chr3:76922842-76922483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 46 | 
| Conread position: | 104-391 | 
| Cow position: | chr3:81507290-81507004 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 47, 110 | 
| Conread position: | 104-397 | 
| Cow position: | chr3:49790990-49790700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 13, 123 | 
| Conread position: | 104-478 | 
| Cow position: | chr3:68632911-68632568 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 104-480 | 
| Cow position: | chr3:3913629-3913250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 47, 135 | 
| Conread position: | 105-463 | 
| Cow position: | chr3:62046485-62046846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 166, 48 | 
| Conread position: | 106-477 | 
| Cow position: | chr3:19792716-19793087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 236 | 
| Conread position: | 107-460 | 
| Cow position: | chr3:18144292-18143943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 86, 40 | 
| Conread position: | 107-463 | 
| Cow position: | chr3:55819572-55819924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 230 | 
| Conread position: | 107-473 | 
| Cow position: | chr3:59034861-59035228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 14 | 
| Conread position: | 107-480 | 
| Cow position: | chr3:45667528-45667150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 12 | 
| Conread position: | 108-463 | 
| Cow position: | chr3:58960763-58960418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 39, 109 | 
| Conread position: | 111-480 | 
| Cow position: | chr3:32787289-32787652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 82, 35 | 
| Conread position: | 113-463 | 
| Cow position: | chr3:2648685-2648333 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 85 | 
| Conread position: | 113-476 | 
| Cow position: | chr3:71478424-71478782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 16 | 
| Conread position: | 113-477 | 
| Cow position: | chr3:48810806-48810450 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 36 | 
| Conread position: | 114-291 | 
| Cow position: | chr3:23037798-23037617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 33, 118 | 
| Conread position: | 114-459 | 
| Cow position: | chr3:54100891-54100542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 18, 73 | 
| Conread position: | 114-478 | 
| Cow position: | chr3:69144538-69144886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 42, 6 | 
| Conread position: | 115-366 | 
| Cow position: | chr3:55109782-55109532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 80, 14 | 
| Conread position: | 115-464 | 
| Cow position: | chr3:30222018-30222387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 36, 115 | 
| Conread position: | 115-480 | 
| Cow position: | chr3:26489252-26488886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 36, 102 | 
| Conread position: | 116-476 | 
| Cow position: | chr3:68616491-68616148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 79, 37 | 
| Conread position: | 117-463 | 
| Cow position: | chr3:48073039-48072711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 184, 36 | 
| Conread position: | 118-391 | 
| Cow position: | chr3:59884237-59883964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 74, 115 | 
| Conread position: | 118-463 | 
| Cow position: | chr3:60264879-60264547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 175, 34 | 
| Conread position: | 119-456 | 
| Cow position: | chr3:12978780-12978447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 75, 114 | 
| Conread position: | 121-398 | 
| Cow position: | chr3:53508460-53508724 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 168, 30 | 
| Conread position: | 121-463 | 
| Cow position: | chr3:52487473-52487804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 33, 26 | 
| Conread position: | 122-387 | 
| Cow position: | chr3:74242835-74243094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 54, 31 | 
| Conread position: | 123-319 | 
| Cow position: | chr3:2851054-2850864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 37, 55 | 
| Conread position: | 124-451 | 
| Cow position: | chr3:19793751-19793427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 89 | 
| Conread position: | 126-325 | 
| Cow position: | chr3:32184177-32183979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 62, 21 | 
| Conread position: | 126-473 | 
| Cow position: | chr3:24468535-24468198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 25 | 
| Conread position: | 129-398 | 
| Cow position: | chr3:46541981-46541715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 64, 22 | 
| Conread position: | 129-411 | 
| Cow position: | chr3:79645597-79645304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 18, 118 | 
| Conread position: | 129-463 | 
| Cow position: | chr3:19900516-19900831 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 14, 25 | 
| Conread position: | 129-480 | 
| Cow position: | chr3:61224895-61224556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 158, 23 | 
| Conread position: | 129-480 | 
| Cow position: | chr3:81039899-81039551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 65, 97 | 
| Conread position: | 130-461 | 
| Cow position: | chr3:77581956-77582279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 62, 98 | 
| Conread position: | 130-463 | 
| Cow position: | chr3:70334117-70333794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 99 | 
| Conread position: | 130-467 | 
| Cow position: | chr3:23920582-23920247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 100 | 
| Conread position: | 130-470 | 
| Cow position: | chr3:15153540-15153870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 19 | 
| Conread position: | 130-473 | 
| Cow position: | chr3:55177905-55177565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 21, 42 | 
| Conread position: | 133-452 | 
| Cow position: | chr3:79196610-79196927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 156, 20 | 
| Conread position: | 133-463 | 
| Cow position: | chr3:22221170-22221501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 60, 31 | 
| Conread position: | 133-473 | 
| Cow position: | chr3:50615418-50615077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 111, 91 | 
| Conread position: | 136-401 | 
| Cow position: | chr3:84243915-84243654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 58, 96 | 
| Conread position: | 136-462 | 
| Cow position: | chr3:3883965-3883646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 57, 17 | 
| Conread position: | 136-480 | 
| Cow position: | chr3:46146879-46146534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 141, 75 | 
| Conread position: | 137-433 | 
| Cow position: | chr3:38783468-38783753 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 14, 104 | 
| Conread position: | 137-480 | 
| Cow position: | chr3:59040420-59040762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 91 | 
| Conread position: | 138-454 | 
| Cow position: | chr3:47417711-47417405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 55, 95 | 
| Conread position: | 140-472 | 
| Cow position: | chr3:48900481-48900146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 35 | 
| Conread position: | 140-480 | 
| Cow position: | chr3:34871425-34871759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 113, 48 | 
| Conread position: | 141-451 | 
| Cow position: | chr3:73820511-73820202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 53, 10 | 
| Conread position: | 141-463 | 
| Cow position: | chr3:1517656-1517338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 35, 69 | 
| Conread position: | 141-478 | 
| Cow position: | chr3:21015104-21014769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 17, 86 | 
| Conread position: | 141-480 | 
| Cow position: | chr3:3889708-3889389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 130, 10 | 
| Conread position: | 141-480 | 
| Cow position: | chr3:79271864-79271519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 64, 137 | 
| Conread position: | 142-463 | 
| Cow position: | chr3:79097959-79098275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 12, 54 | 
| Conread position: | 142-468 | 
| Cow position: | chr3:15443870-15443546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 11 | 
| Conread position: | 142-473 | 
| Cow position: | chr3:76155846-76156172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 34, 29 | 
| Conread position: | 150-397 | 
| Cow position: | chr3:84175959-84175712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 45, 83 | 
| Conread position: | 152-391 | 
| Cow position: | chr3:72504030-72503790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 15, 6 | 
| Conread position: | 153-458 | 
| Cow position: | chr3:7661722-7662027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 42, 70 | 
| Conread position: | 153-463 | 
| Cow position: | chr3:17235339-17235029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 42, 19 | 
| Conread position: | 153-463 | 
| Cow position: | chr3:64526717-64527021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 40, 62 | 
| Conread position: | 153-472 | 
| Cow position: | chr3:78093514-78093209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 40, 68 | 
| Conread position: | 153-473 | 
| Cow position: | chr3:72342114-72342433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 72 | 
| Conread position: | 153-480 | 
| Cow position: | chr3:17331596-17331913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 25, 18 | 
| Conread position: | 154-383 | 
| Cow position: | chr3:74846839-74846612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 135, 88 | 
| Conread position: | 154-466 | 
| Cow position: | chr3:83787307-83787620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 32, 68 | 
| Conread position: | 154-478 | 
| Cow position: | chr3:30026247-30026564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 135, 46 | 
| Conread position: | 154-479 | 
| Cow position: | chr3:35056108-35055786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 40, 72 | 
| Conread position: | 154-479 | 
| Cow position: | chr3:42796638-42796326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 40, 53 | 
| Conread position: | 155-459 | 
| Cow position: | chr3:17058669-17058376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 37, 66 | 
| Conread position: | 156-463 | 
| Cow position: | chr3:5696857-5696554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 37, 73 | 
| Conread position: | 156-466 | 
| Cow position: | chr3:18179818-18180141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 27, 216 | 
| Conread position: | 156-479 | 
| Cow position: | chr3:56678481-56678162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 37, 66 | 
| Conread position: | 156-480 | 
| Cow position: | chr3:53210148-53209813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 38, 54 | 
| Conread position: | 157-473 | 
| Cow position: | chr3:13380413-13380092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 32, 236 | 
| Conread position: | 157-480 | 
| Cow position: | chr3:58134814-58134492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 58 | 
| Conread position: | 161-463 | 
| Cow position: | chr3:45700684-45700977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 36, 61 | 
| Conread position: | 162-463 | 
| Cow position: | chr3:6403300-6403596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 31, 64 | 
| Conread position: | 163-473 | 
| Cow position: | chr3:58527277-58527562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 163-480 | 
| Cow position: | chr3:26992446-26992764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 30, 52 | 
| Conread position: | 164-474 | 
| Cow position: | chr3:48459450-48459142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 6, 31 | 
| Conread position: | 166-463 | 
| Cow position: | chr3:58318071-58317768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 170-474 | 
| Cow position: | chr3:4268694-4268385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 111, 50 | 
| Conread position: | 171-478 | 
| Cow position: | chr3:18059589-18059893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 31, 59 | 
| Conread position: | 172-472 | 
| Cow position: | chr3:22668303-22668596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 21, 48 | 
| Conread position: | 172-478 | 
| Cow position: | chr3:51402797-51403087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 15, 43 | 
| Conread position: | 173-473 | 
| Cow position: | chr3:57704212-57704520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 21, 61 | 
| Conread position: | 174-397 | 
| Cow position: | chr3:55983985-55984210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 15, 143 | 
| Conread position: | 175-467 | 
| Cow position: | chr3:65019974-65019672 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 13, 54 | 
| Conread position: | 175-473 | 
| Cow position: | chr3:33329705-33330019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 18, 64 | 
| Conread position: | 175-479 | 
| Cow position: | chr3:26792366-26792644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 19, 13 | 
| Conread position: | 176-457 | 
| Cow position: | chr3:9116920-9117203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 17, 39 | 
| Conread position: | 177-459 | 
| Cow position: | chr3:31361312-31361594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 24, 7 | 
| Conread position: | 177-473 | 
| Cow position: | chr3:15951018-15950731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 16, 52 | 
| Conread position: | 177-478 | 
| Cow position: | chr3:3656407-3656704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 69 | 
| Conread position: | 177-480 | 
| Cow position: | chr3:83988425-83988725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 19, 10 | 
| Conread position: | 178-463 | 
| Cow position: | chr3:3316918-3316633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 17, 48 | 
| Conread position: | 178-479 | 
| Cow position: | chr3:22165523-22165225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 37 | 
| Conread position: | 181-458 | 
| Cow position: | chr3:73837817-73837548 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 39, 44 | 
| Conread position: | 181-480 | 
| Cow position: | chr3:20043691-20043403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 88, 25 | 
| Conread position: | 182-478 | 
| Cow position: | chr3:59299475-59299764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 191-424 | 
| Cow position: | chr3:32409120-32409356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 98, 22 | 
| Conread position: | 191-457 | 
| Cow position: | chr3:75238367-75238630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 33 | 
| Conread position: | 191-460 | 
| Cow position: | chr3:64196733-64196997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 98, 37 | 
| Conread position: | 193-463 | 
| Cow position: | chr3:63844840-63845115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 88, 27 | 
| Conread position: | 193-480 | 
| Cow position: | chr3:47753135-47753432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 100, 37 | 
| Conread position: | 194-445 | 
| Cow position: | chr3:84250632-84250392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 194-459 | 
| Cow position: | chr3:31350193-31349938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 95, 19 | 
| Conread position: | 194-460 | 
| Cow position: | chr3:59945038-59945299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 95, 11 | 
| Conread position: | 194-462 | 
| Cow position: | chr3:23804429-23804676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 194-463 | 
| Cow position: | chr3:5707302-5707035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 95, 26 | 
| Conread position: | 194-466 | 
| Cow position: | chr3:71474496-71474229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 31, 44 | 
| Conread position: | 194-478 | 
| Cow position: | chr3:21867124-21866848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 99, 13 | 
| Conread position: | 194-479 | 
| Cow position: | chr3:80597635-80597918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 59, 37 | 
| Conread position: | 194-480 | 
| Cow position: | chr3:75778149-75777878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 94, 34 | 
| Conread position: | 194-480 | 
| Cow position: | chr3:79813518-79813809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 44, 33 | 
| Conread position: | 195-468 | 
| Cow position: | chr3:11640641-11640912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 40, 254 | 
| Conread position: | 195-479 | 
| Cow position: | chr3:23203322-23203041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 60, 52 | 
| Conread position: | 195-480 | 
| Cow position: | chr3:51609273-51608990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 79, 29 | 
| Conread position: | 196-480 | 
| Cow position: | chr3:54481889-54481611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 91, 46 | 
| Conread position: | 197-463 | 
| Cow position: | chr3:19682607-19682881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 92, 31 | 
| Conread position: | 200-451 | 
| Cow position: | chr3:40145385-40145630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 87, 38 | 
| Conread position: | 201-459 | 
| Cow position: | chr3:54067711-54067965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 38, 80 | 
| Conread position: | 201-463 | 
| Cow position: | chr3:36160276-36160025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 86, 18 | 
| Conread position: | 201-474 | 
| Cow position: | chr3:47316461-47316190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 251, 23 | 
| Conread position: | 202-394 | 
| Cow position: | chr3:4480860-4481051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 87, 11 | 
| Conread position: | 202-479 | 
| Cow position: | chr3:27976606-27976330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 85, 30 | 
| Conread position: | 203-458 | 
| Cow position: | chr3:10668958-10668709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 151, 10 | 
| Conread position: | 204-480 | 
| Cow position: | chr3:32569774-32570049 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 44, 16 | 
| Conread position: | 205-459 | 
| Cow position: | chr3:14546924-14547170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 88, 23 | 
| Conread position: | 205-459 | 
| Cow position: | chr3:59933289-59933551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 20, 147 | 
| Conread position: | 210-472 | 
| Cow position: | chr3:46305391-46305646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 189, 20 | 
| Conread position: | 210-478 | 
| Cow position: | chr3:80733933-80733660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 31, 5 | 
| Conread position: | 210-480 | 
| Cow position: | chr3:41129630-41129906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 26, 74 | 
| Conread position: | 214-480 | 
| Cow position: | chr3:83889175-83889440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 251, 0 | 
| Conread position: | 217-473 | 
| Cow position: | chr3:23132238-23131983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 72, 182 | 
| Conread position: | 220-479 | 
| Cow position: | chr3:9026150-9025896 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 54, 61 | 
| Conread position: | 226-472 | 
| Cow position: | chr3:9120785-9121026 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 227-477 | 
| Cow position: | chr3:4548969-4549209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 69, 15 | 
| Conread position: | 227-479 | 
| Cow position: | chr3:69650948-69650708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 62, 153 | 
| Conread position: | 228-440 | 
| Cow position: | chr3:33048451-33048240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 61, 10 | 
| Conread position: | 228-476 | 
| Cow position: | chr3:2637868-2638122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 228-479 | 
| Cow position: | chr3:76269834-76270075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 61, 105 | 
| Conread position: | 229-439 | 
| Cow position: | chr3:76932160-76931965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 229-463 | 
| Cow position: | chr3:6182278-6182058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 77, 60 | 
| Conread position: | 230-478 | 
| Cow position: | chr3:27083107-27082852 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 11, 163 | 
| Conread position: | 231-473 | 
| Cow position: | chr3:56949143-56948910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 58, 150 | 
| Conread position: | 232-391 | 
| Cow position: | chr3:68059261-68059419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 57, 123 | 
| Conread position: | 232-400 | 
| Cow position: | chr3:82629262-82629430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 54, 130 | 
| Conread position: | 232-438 | 
| Cow position: | chr3:46266147-46266353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 9, 19 | 
| Conread position: | 232-463 | 
| Cow position: | chr3:84174247-84174479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 64, 38 | 
| Conread position: | 232-466 | 
| Cow position: | chr3:12090619-12090855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 66, 94 | 
| Conread position: | 232-468 | 
| Cow position: | chr3:8182004-8181769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 138, 8 | 
| Conread position: | 232-468 | 
| Cow position: | chr3:10841758-10841996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 42, 58 | 
| Conread position: | 232-472 | 
| Cow position: | chr3:79272627-79272392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 57, 138 | 
| Conread position: | 232-476 | 
| Cow position: | chr3:41873847-41874097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 41, 141 | 
| Conread position: | 232-478 | 
| Cow position: | chr3:29828471-29828224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 64, 47 | 
| Conread position: | 232-479 | 
| Cow position: | chr3:68004756-68004522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 57, 153 | 
| Conread position: | 232-480 | 
| Cow position: | chr3:48468119-48468367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 51, 234 | 
| Conread position: | 232-480 | 
| Cow position: | chr3:53428969-53428722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 61, 14 | 
| Conread position: | 232-480 | 
| Cow position: | chr3:69785679-69785428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 54, 172 | 
| Conread position: | 233-463 | 
| Cow position: | chr3:3275543-3275770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 45, 32 | 
| Conread position: | 233-473 | 
| Cow position: | chr3:11281713-11281955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 233-474 | 
| Cow position: | chr3:25905101-25904853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 48, 9 | 
| Conread position: | 233-478 | 
| Cow position: | chr3:39606075-39605820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 48, 135 | 
| Conread position: | 233-478 | 
| Cow position: | chr3:40213086-40212847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 63, 34 | 
| Conread position: | 233-478 | 
| Cow position: | chr3:49363056-49363297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 53, 144 | 
| Conread position: | 233-479 | 
| Cow position: | chr3:20841926-20841687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 56, 144 | 
| Conread position: | 234-397 | 
| Cow position: | chr3:64373209-64373044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 234-459 | 
| Cow position: | chr3:81234337-81234559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 55, 160 | 
| Conread position: | 234-463 | 
| Cow position: | chr3:5305747-5305978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 55, 9 | 
| Conread position: | 234-475 | 
| Cow position: | chr3:59702120-59702363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 145, 16 | 
| Conread position: | 234-479 | 
| Cow position: | chr3:39996943-39996701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 55, 154 | 
| Conread position: | 234-480 | 
| Cow position: | chr3:14770934-14770695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 55, 147 | 
| Conread position: | 234-480 | 
| Cow position: | chr3:57776749-57776989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 55, 80 | 
| Conread position: | 235-457 | 
| Cow position: | chr3:1028697-1028477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 33, 62 | 
| Conread position: | 235-463 | 
| Cow position: | chr3:82084768-82084996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 135, 27 | 
| Conread position: | 235-466 | 
| Cow position: | chr3:38248600-38248834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 235-474 | 
| Cow position: | chr3:16107408-16107185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 224, 51 | 
| Conread position: | 236-464 | 
| Cow position: | chr3:53084038-53083809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 61, 152 | 
| Conread position: | 236-479 | 
| Cow position: | chr3:73335234-73335470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 53, 143 | 
| Conread position: | 236-479 | 
| Cow position: | chr3:81923849-81923600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 156, 0 | 
| Conread position: | 237-463 | 
| Cow position: | chr3:1011437-1011667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 61, 127 | 
| Conread position: | 237-468 | 
| Cow position: | chr3:49996772-49996537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 237-473 | 
| Cow position: | chr3:8974802-8975032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 237-480 | 
| Cow position: | chr3:73525287-73525043 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 238-454 | 
| Cow position: | chr3:26603602-26603380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 43, 5 | 
| Conread position: | 238-457 | 
| Cow position: | chr3:3584665-3584883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 55, 124 | 
| Conread position: | 238-480 | 
| Cow position: | chr3:75107726-75107965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 66, 41 | 
| Conread position: | 239-463 | 
| Cow position: | chr3:75222454-75222680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 15, 132 | 
| Conread position: | 239-480 | 
| Cow position: | chr3:80709914-80709668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 240-479 | 
| Cow position: | chr3:8814159-8813914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 49, 216 | 
| Conread position: | 240-480 | 
| Cow position: | chr3:80329267-80329507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 49, 136 | 
| Conread position: | 241-473 | 
| Cow position: | chr3:54350492-54350249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 242-452 | 
| Cow position: | chr3:72255464-72255254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 18, 99 | 
| Conread position: | 244-463 | 
| Cow position: | chr3:84928061-84928282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 244-480 | 
| Cow position: | chr3:35624587-35624353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 45, 63 | 
| Conread position: | 245-479 | 
| Cow position: | chr3:4071804-4071578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 247-457 | 
| Cow position: | chr3:70756680-70756470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 46, 23 | 
| Conread position: | 247-462 | 
| Cow position: | chr3:15973527-15973744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 247-480 | 
| Cow position: | chr3:6728369-6728130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 46, 225 | 
| Conread position: | 247-480 | 
| Cow position: | chr3:44959903-44960137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 248-480 | 
| Cow position: | chr3:13241114-13240878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 249-473 | 
| Cow position: | chr3:22889054-22888828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 44, 162 | 
| Conread position: | 249-474 | 
| Cow position: | chr3:54297519-54297295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 34, 28 | 
| Conread position: | 249-479 | 
| Cow position: | chr3:51329270-51329041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 7, 39 | 
| Conread position: | 252-459 | 
| Cow position: | chr3:41863590-41863793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 17, 133 | 
| Conread position: | 252-459 | 
| Cow position: | chr3:52456884-52457080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 155, 43 | 
| Conread position: | 252-460 | 
| Cow position: | chr3:46559749-46559544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 37, 110 | 
| Conread position: | 252-463 | 
| Cow position: | chr3:54905584-54905781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 252-478 | 
| Cow position: | chr3:7860287-7860060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 44, 25 | 
| Conread position: | 252-480 | 
| Cow position: | chr3:5551847-5551615 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 13, 215 | 
| Conread position: | 252-480 | 
| Cow position: | chr3:18248918-18249146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 37, 214 | 
| Conread position: | 252-480 | 
| Cow position: | chr3:22924409-22924189 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 34, 129 | 
| Conread position: | 252-480 | 
| Cow position: | chr3:83770697-83770926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 253-457 | 
| Cow position: | chr3:45823055-45822850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 253-459 | 
| Cow position: | chr3:59828426-59828217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 253-463 | 
| Cow position: | chr3:44207917-44207702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 28, 83 | 
| Conread position: | 253-463 | 
| Cow position: | chr3:82366096-82366304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 79, 16 | 
| Conread position: | 253-478 | 
| Cow position: | chr3:32317864-32317639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 36, 123 | 
| Conread position: | 254-463 | 
| Cow position: | chr3:84137847-84137639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 35, 136 | 
| Conread position: | 254-473 | 
| Cow position: | chr3:5703146-5703361 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 35, 72 | 
| Conread position: | 254-473 | 
| Cow position: | chr3:48483146-48483363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 35, 177 | 
| Conread position: | 254-479 | 
| Cow position: | chr3:58452016-58452234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 255-463 | 
| Cow position: | chr3:29334447-29334236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 41, 204 | 
| Conread position: | 255-463 | 
| Cow position: | chr3:74644526-74644735 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 19, 26 | 
| Conread position: | 255-478 | 
| Cow position: | chr3:66631383-66631152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 34, 170 | 
| Conread position: | 255-480 | 
| Cow position: | chr3:4120397-4120180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 38, 116 | 
| Conread position: | 255-480 | 
| Cow position: | chr3:11229396-11229178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 38, 121 | 
| Conread position: | 255-480 | 
| Cow position: | chr3:59588607-59588834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 20, 42 | 
| Conread position: | 257-463 | 
| Cow position: | chr3:28897048-28896846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 258-474 | 
| Cow position: | chr3:67407394-67407178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 35, 129 | 
| Conread position: | 258-480 | 
| Cow position: | chr3:7381857-7381641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 259-450 | 
| Cow position: | chr3:14589268-14589068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 30, 112 | 
| Conread position: | 260-474 | 
| Cow position: | chr3:6299431-6299644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 20, 28 | 
| Conread position: | 260-480 | 
| Cow position: | chr3:45314318-45314544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 261-463 | 
| Cow position: | chr3:81666774-81666972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 44, 129 | 
| Conread position: | 261-468 | 
| Cow position: | chr3:61024051-61023841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 8, 200 | 
| Conread position: | 262-397 | 
| Cow position: | chr3:28937629-28937492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 262-472 | 
| Cow position: | chr3:59885516-59885715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 27, 49 | 
| Conread position: | 263-434 | 
| Cow position: | chr3:19788853-19788685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 23, 119 | 
| Conread position: | 263-466 | 
| Cow position: | chr3:82195463-82195662 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 26, 77 | 
| Conread position: | 264-463 | 
| Cow position: | chr3:84807350-84807151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 25, 168 | 
| Conread position: | 264-471 | 
| Cow position: | chr3:4271350-4271548 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 25, 130 | 
| Conread position: | 264-472 | 
| Cow position: | chr3:79339601-79339392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 25, 44 | 
| Conread position: | 264-480 | 
| Cow position: | chr3:32376792-32377003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 265-473 | 
| Cow position: | chr3:985993-986200 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 24, 87 | 
| Conread position: | 265-480 | 
| Cow position: | chr3:3708586-3708793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 11, 28 | 
| Conread position: | 265-480 | 
| Cow position: | chr3:18700132-18699916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 265-480 | 
| Cow position: | chr3:58101658-58101868 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 24, 66 | 
| Conread position: | 266-478 | 
| Cow position: | chr3:36412110-36411900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 30, 176 | 
| Conread position: | 266-480 | 
| Cow position: | chr3:79893518-79893300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 23, 111 | 
| Conread position: | 268-463 | 
| Cow position: | chr3:12669118-12669314 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 21, 33 | 
| Conread position: | 268-463 | 
| Cow position: | chr3:47199147-47198951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 28, 147 | 
| Conread position: | 268-480 | 
| Cow position: | chr3:27286500-27286711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 21, 111 | 
| Conread position: | 270-459 | 
| Cow position: | chr3:80023327-80023144 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 34, 140 | 
| Conread position: | 270-463 | 
| Cow position: | chr3:78071808-78071617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 33, 7 | 
| Conread position: | 270-468 | 
| Cow position: | chr3:83671839-83672035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 19, 97 | 
| Conread position: | 270-473 | 
| Cow position: | chr3:25735922-25735718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 270-478 | 
| Cow position: | chr3:11027264-11027467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 6, 0 | 
| Conread position: | 270-478 | 
| Cow position: | chr3:68289662-68289872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 90, 25 | 
| Conread position: | 271-457 | 
| Cow position: | chr3:77171300-77171487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 271-463 | 
| Cow position: | chr3:75966798-75966607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 81, 118 | 
| Conread position: | 271-466 | 
| Cow position: | chr3:59947650-59947846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 271-467 | 
| Cow position: | chr3:59271816-59272011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 27, 48 | 
| Conread position: | 271-473 | 
| Cow position: | chr3:84154400-84154592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 18, 37 | 
| Conread position: | 273-458 | 
| Cow position: | chr3:20066164-20065977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 273-476 | 
| Cow position: | chr3:31793894-31793696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 275-472 | 
| Cow position: | chr3:59819900-59820093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 277-473 | 
| Cow position: | chr3:55730478-55730281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 277-480 | 
| Cow position: | chr3:44534542-44534341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 94, 20 | 
| Conread position: | 280-473 | 
| Cow position: | chr3:80958517-80958325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 7, 33 | 
| Conread position: | 281-470 | 
| Cow position: | chr3:44782336-44782520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 281-480 | 
| Cow position: | chr3:75183303-75183509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 5, 157 | 
| Conread position: | 282-463 | 
| Cow position: | chr3:60186142-60186328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 69, 33 | 
| Conread position: | 282-475 | 
| Cow position: | chr3:39812043-39812246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 11, 158 | 
| Conread position: | 283-479 | 
| Cow position: | chr3:45743908-45744100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 26, 14 | 
| Conread position: | 287-459 | 
| Cow position: | chr3:65022296-65022474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 287-460 | 
| Cow position: | chr3:67737319-67737492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 287-466 | 
| Cow position: | chr3:6265787-6265968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 287-466 | 
| Cow position: | chr3:39912681-39912509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 287-480 | 
| Cow position: | chr3:44720503-44720692 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 181, 38 | 
| Conread position: | 288-472 | 
| Cow position: | chr3:22734255-22734074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 174, 82 | 
| Conread position: | 289-480 | 
| Cow position: | chr3:44594624-44594814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 14, 77 | 
| Conread position: | 289-480 | 
| Cow position: | chr3:51153049-51153236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 291-473 | 
| Cow position: | chr3:77098817-77098638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 176, 90 | 
| Conread position: | 292-463 | 
| Cow position: | chr3:11023451-11023629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 75, 69 | 
| Conread position: | 292-466 | 
| Cow position: | chr3:13927822-13927996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 10, 34 | 
| Conread position: | 292-480 | 
| Cow position: | chr3:37647393-37647583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 75, 69 | 
| Conread position: | 292-480 | 
| Cow position: | chr3:79398149-79398335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 173, 0 | 
| Conread position: | 293-451 | 
| Cow position: | chr3:28643419-28643574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 294-463 | 
| Cow position: | chr3:73943865-73943697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 73, 67 | 
| Conread position: | 294-468 | 
| Cow position: | chr3:62789946-62789769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 294-480 | 
| Cow position: | chr3:51150137-51150322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 76, 141 | 
| Conread position: | 295-454 | 
| Cow position: | chr3:28884151-28883996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 295-454 | 
| Cow position: | chr3:83199521-83199679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 295-457 | 
| Cow position: | chr3:67942526-67942364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 295-459 | 
| Cow position: | chr3:65308444-65308282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 295-463 | 
| Cow position: | chr3:15795229-15795397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 162, 73 | 
| Conread position: | 295-463 | 
| Cow position: | chr3:17039622-17039790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 32, 146 | 
| Conread position: | 295-463 | 
| Cow position: | chr3:20911400-20911236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 135, 0 | 
| Conread position: | 295-463 | 
| Cow position: | chr3:58010819-58010659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 295-463 | 
| Cow position: | chr3:59681894-59681732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 295-468 | 
| Cow position: | chr3:70431440-70431609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 86, 30 | 
| Conread position: | 295-472 | 
| Cow position: | chr3:28902749-28902578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 295-472 | 
| Cow position: | chr3:56754523-56754350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 161, 28 | 
| Conread position: | 295-472 | 
| Cow position: | chr3:64910086-64909911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 101, 0 | 
| Conread position: | 295-473 | 
| Cow position: | chr3:19044756-19044583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 295-474 | 
| Cow position: | chr3:62186161-62186344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 97, 0 | 
| Conread position: | 295-478 | 
| Cow position: | chr3:23037499-23037318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 295-478 | 
| Cow position: | chr3:53266487-53266668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 132, 0 | 
| Conread position: | 295-478 | 
| Cow position: | chr3:72687860-72687678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 170, 0 | 
| Conread position: | 295-478 | 
| Cow position: | chr3:79730526-79730708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 170, 0 | 
| Conread position: | 295-479 | 
| Cow position: | chr3:11607832-11608006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 295-479 | 
| Cow position: | chr3:81616443-81616258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 177, 0 | 
| Conread position: | 295-480 | 
| Cow position: | chr3:14211973-14211795 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 295-480 | 
| Cow position: | chr3:35079498-35079315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 170, 0 | 
| Conread position: | 295-480 | 
| Cow position: | chr3:37851506-37851686 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 16, 109 | 
| Conread position: | 295-480 | 
| Cow position: | chr3:70402654-70402830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 295-480 | 
| Cow position: | chr3:83705527-83705343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 296-428 | 
| Cow position: | chr3:25060338-25060469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 83, 105 | 
| Conread position: | 296-440 | 
| Cow position: | chr3:32361994-32361855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 296-449 | 
| Cow position: | chr3:5003644-5003793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 296-459 | 
| Cow position: | chr3:4518172-4518013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 296-459 | 
| Cow position: | chr3:40958116-40957957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 296-460 | 
| Cow position: | chr3:20021280-20021440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 296-460 | 
| Cow position: | chr3:24516200-24516034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 296-461 | 
| Cow position: | chr3:56943915-56943757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 296-462 | 
| Cow position: | chr3:5737762-5737918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 296-462 | 
| Cow position: | chr3:23753502-23753658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 296-463 | 
| Cow position: | chr3:562783-562614 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 71, 113 | 
| Conread position: | 296-463 | 
| Cow position: | chr3:41366699-41366525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 127, 0 | 
| Conread position: | 296-463 | 
| Cow position: | chr3:41510587-41510753 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 34, 86 | 
| Conread position: | 296-463 | 
| Cow position: | chr3:43896049-43895888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 296-463 | 
| Cow position: | chr3:46259721-46259887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 296-463 | 
| Cow position: | chr3:52845567-52845730 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 296-463 | 
| Cow position: | chr3:63069355-63069186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 97, 0 | 
| Conread position: | 296-463 | 
| Cow position: | chr3:73589760-73589591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 296-463 | 
| Cow position: | chr3:74050691-74050531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 296-467 | 
| Cow position: | chr3:26393289-26393120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 296-468 | 
| Cow position: | chr3:29234670-29234498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 87, 142 | 
| Conread position: | 296-468 | 
| Cow position: | chr3:49733042-49732875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 83, 53 | 
| Conread position: | 296-472 | 
| Cow position: | chr3:37641337-37641511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 165, 72 | 
| Conread position: | 296-473 | 
| Cow position: | chr3:11029899-11029724 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 60, 159 | 
| Conread position: | 296-473 | 
| Cow position: | chr3:15859368-15859197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 64, 53 | 
| Conread position: | 296-473 | 
| Cow position: | chr3:17531727-17531553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 296-473 | 
| Cow position: | chr3:26977545-26977723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 37, 89 | 
| Conread position: | 296-473 | 
| Cow position: | chr3:35074889-35075058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 172, 83 | 
| Conread position: | 296-474 | 
| Cow position: | chr3:19709121-19709290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 296-477 | 
| Cow position: | chr3:55106138-55105955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 165, 0 | 
| Conread position: | 296-478 | 
| Cow position: | chr3:19611341-19611159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 60, 66 | 
| Conread position: | 296-478 | 
| Cow position: | chr3:25037981-25037814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 296-478 | 
| Cow position: | chr3:76056274-76056098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 296-480 | 
| Cow position: | chr3:24596412-24596242 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 97, 0 | 
| Conread position: | 296-480 | 
| Cow position: | chr3:59317713-59317891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 78, 49 | 
| Conread position: | 296-480 | 
| Cow position: | chr3:68094155-68094344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 58, 66 | 
| Conread position: | 296-480 | 
| Cow position: | chr3:68624228-68624416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 163, 96 | 
| Conread position: | 297-451 | 
| Cow position: | chr3:10115310-10115458 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 297-451 | 
| Cow position: | chr3:57336786-57336942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 297-457 | 
| Cow position: | chr3:57706745-57706582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 297-463 | 
| Cow position: | chr3:8775330-8775495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 297-463 | 
| Cow position: | chr3:24220566-24220405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 297-463 | 
| Cow position: | chr3:59268383-59268549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 297-466 | 
| Cow position: | chr3:35802929-35802758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 101, 0 | 
| Conread position: | 297-466 | 
| Cow position: | chr3:59926632-59926811 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 297-466 | 
| Cow position: | chr3:75687920-75687752 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 70, 64 | 
| Conread position: | 297-467 | 
| Cow position: | chr3:635189-635357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 297-473 | 
| Cow position: | chr3:6049277-6049099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 62, 68 | 
| Conread position: | 297-473 | 
| Cow position: | chr3:30266681-30266507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 170, 17 | 
| Conread position: | 297-474 | 
| Cow position: | chr3:4194396-4194218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 109, 92 | 
| Conread position: | 297-474 | 
| Cow position: | chr3:32248023-32248199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 157, 0 | 
| Conread position: | 297-474 | 
| Cow position: | chr3:80173011-80173185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 297-476 | 
| Cow position: | chr3:15160532-15160705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 297-476 | 
| Cow position: | chr3:64800538-64800357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 171, 0 | 
| Conread position: | 297-477 | 
| Cow position: | chr3:3262822-3262633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 297-477 | 
| Cow position: | chr3:48300449-48300268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 164, 135 | 
| Conread position: | 297-478 | 
| Cow position: | chr3:76168620-76168436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 167, 0 | 
| Conread position: | 297-479 | 
| Cow position: | chr3:57641812-57641993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 102, 19 | 
| Conread position: | 297-480 | 
| Cow position: | chr3:423380-423561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 167, 0 | 
| Conread position: | 297-480 | 
| Cow position: | chr3:2016447-2016625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 176, 86 | 
| Conread position: | 297-480 | 
| Cow position: | chr3:26338008-26337824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 297-480 | 
| Cow position: | chr3:38331600-38331420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 297-480 | 
| Cow position: | chr3:58614468-58614656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 85, 0 | 
| Conread position: | 297-480 | 
| Cow position: | chr3:75871490-75871673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 297-480 | 
| Cow position: | chr3:79105571-79105391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 168, 0 | 
| Conread position: | 298-455 | 
| Cow position: | chr3:53552967-53552817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 298-460 | 
| Cow position: | chr3:59699638-59699479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 298-463 | 
| Cow position: | chr3:82425066-82424906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 298-473 | 
| Cow position: | chr3:57790626-57790792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 298-479 | 
| Cow position: | chr3:20158081-20158265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 86, 56 | 
| Conread position: | 298-480 | 
| Cow position: | chr3:23640356-23640531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 58, 64 | 
| Conread position: | 300-463 | 
| Cow position: | chr3:22868705-22868541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 17, 90 | 
| Conread position: | 300-463 | 
| Cow position: | chr3:69205033-69205191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 300-466 | 
| Cow position: | chr3:12178072-12178239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 79, 10 | 
| Conread position: | 300-467 | 
| Cow position: | chr3:78258740-78258571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 300-468 | 
| Cow position: | chr3:44724876-44725048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 125, 80 | 
| Conread position: | 300-473 | 
| Cow position: | chr3:53604731-53604559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 300-473 | 
| Cow position: | chr3:77665536-77665365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 152, 17 | 
| Conread position: | 300-480 | 
| Cow position: | chr3:48772222-48772033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 60, 54 | 
| Conread position: | 301-461 | 
| Cow position: | chr3:34164270-34164115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 301-463 | 
| Cow position: | chr3:80910611-80910772 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 301-468 | 
| Cow position: | chr3:4931825-4931650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 301-468 | 
| Cow position: | chr3:25702326-25702151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 301-471 | 
| Cow position: | chr3:3164094-3163932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 68, 60 | 
| Conread position: | 301-471 | 
| Cow position: | chr3:8147510-8147339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 59, 108 | 
| Conread position: | 301-472 | 
| Cow position: | chr3:3453595-3453767 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 159, 0 | 
| Conread position: | 301-473 | 
| Cow position: | chr3:72027653-72027825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 167, 11 | 
| Conread position: | 301-477 | 
| Cow position: | chr3:62370071-62370245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 301-478 | 
| Cow position: | chr3:3011162-3011336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 72, 110 | 
| Conread position: | 301-478 | 
| Cow position: | chr3:16710784-16710604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 113, 57 | 
| Conread position: | 301-478 | 
| Cow position: | chr3:21694240-21694418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 69, 109 | 
| Conread position: | 301-478 | 
| Cow position: | chr3:60370998-60371174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 301-478 | 
| Cow position: | chr3:63860595-63860421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 301-479 | 
| Cow position: | chr3:83934741-83934916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 170, 79 | 
| Conread position: | 301-480 | 
| Cow position: | chr3:18479282-18479107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 301-480 | 
| Cow position: | chr3:33460593-33460407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 302-462 | 
| Cow position: | chr3:74515321-74515162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 70, 90 | 
| Conread position: | 302-463 | 
| Cow position: | chr3:8523137-8522979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 302-463 | 
| Cow position: | chr3:18471318-18471478 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 302-473 | 
| Cow position: | chr3:72745546-72745368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 303-463 | 
| Cow position: | chr3:49787576-49787731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 303-463 | 
| Cow position: | chr3:58929517-58929357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 303-463 | 
| Cow position: | chr3:76300789-76300949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 303-473 | 
| Cow position: | chr3:2636912-2636749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 303-474 | 
| Cow position: | chr3:61680335-61680503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 303-478 | 
| Cow position: | chr3:42589116-42589289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 67, 128 | 
| Conread position: | 304-463 | 
| Cow position: | chr3:48537381-48537541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 304-463 | 
| Cow position: | chr3:73701526-73701673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 304-466 | 
| Cow position: | chr3:58558298-58558460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 304-467 | 
| Cow position: | chr3:621453-621620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 304-471 | 
| Cow position: | chr3:27368650-27368481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 304-480 | 
| Cow position: | chr3:34931782-34931606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 159, 36 | 
| Conread position: | 304-480 | 
| Cow position: | chr3:42483945-42484119 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 27, 122 | 
| Conread position: | 305-463 | 
| Cow position: | chr3:2636969-2637120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 305-478 | 
| Cow position: | chr3:43016431-43016249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 306-436 | 
| Cow position: | chr3:73162370-73162248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 306-463 | 
| Cow position: | chr3:22078096-22078253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 306-471 | 
| Cow position: | chr3:22899712-22899548 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 306-477 | 
| Cow position: | chr3:18764122-18764295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 70, 79 | 
| Conread position: | 306-480 | 
| Cow position: | chr3:21959680-21959857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 81, 112 | 
| Conread position: | 308-480 | 
| Cow position: | chr3:69849270-69849104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 160, 62 | 
| Conread position: | 309-460 | 
| Cow position: | chr3:52450449-52450593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 58, 51 | 
| Conread position: | 309-463 | 
| Cow position: | chr3:16867847-16867998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 309-463 | 
| Cow position: | chr3:58562717-58562876 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 17, 66 | 
| Conread position: | 309-463 | 
| Cow position: | chr3:70925105-70925259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 309-464 | 
| Cow position: | chr3:73925014-73924864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 309-466 | 
| Cow position: | chr3:51543458-51543617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 309-473 | 
| Cow position: | chr3:44218789-44218952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 156, 0 | 
| Conread position: | 309-478 | 
| Cow position: | chr3:74127485-74127312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 72, 162 | 
| Conread position: | 310-463 | 
| Cow position: | chr3:19641083-19641240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 310-463 | 
| Cow position: | chr3:61171344-61171183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 310-473 | 
| Cow position: | chr3:75907936-75908096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 18, 72 | 
| Conread position: | 310-477 | 
| Cow position: | chr3:43389103-43388934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 158, 0 | 
| Conread position: | 311-473 | 
| Cow position: | chr3:6547449-6547611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 103, 92 | 
| Conread position: | 311-477 | 
| Cow position: | chr3:62312821-62312986 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 147, 0 | 
| Conread position: | 312-463 | 
| Cow position: | chr3:73410313-73410458 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 312-466 | 
| Cow position: | chr3:17304944-17304792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 75, 49 | 
| Conread position: | 314-480 | 
| Cow position: | chr3:12621349-12621183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 315-461 | 
| Cow position: | chr3:56932474-56932627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 66, 60 | 
| Conread position: | 315-463 | 
| Cow position: | chr3:20888633-20888486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 315-463 | 
| Cow position: | chr3:66354708-66354856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 51, 97 | 
| Conread position: | 315-463 | 
| Cow position: | chr3:78115563-78115415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 315-473 | 
| Cow position: | chr3:8540537-8540686 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 40, 47 | 
| Conread position: | 315-473 | 
| Cow position: | chr3:58497687-58497845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 317-474 | 
| Cow position: | chr3:29943888-29944046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 318-474 | 
| Cow position: | chr3:35585864-35586020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 142, 134 | 
| Conread position: | 320-473 | 
| Cow position: | chr3:7408470-7408623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 321-480 | 
| Cow position: | chr3:53591461-53591303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 144, 0 | 
| Conread position: | 322-466 | 
| Cow position: | chr3:18301534-18301390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 322-479 | 
| Cow position: | chr3:72291268-72291425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 5, 102 | 
| Conread position: | 325-480 | 
| Cow position: | chr3:34392181-34392033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 325-480 | 
| Cow position: | chr3:84250787-84250629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 50, 18 | 
| Conread position: | 327-463 | 
| Cow position: | chr3:55973036-55972908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 327-466 | 
| Cow position: | chr3:72626704-72626564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 327-480 | 
| Cow position: | chr3:57553851-57553708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 329-474 | 
| Cow position: | chr3:32436679-32436824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 102, 35 | 
| Conread position: | 329-478 | 
| Cow position: | chr3:82121588-82121441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 331-480 | 
| Cow position: | chr3:79316734-79316883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 60, 118 | 
| Conread position: | 332-473 | 
| Cow position: | chr3:41826286-41826151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 332-478 | 
| Cow position: | chr3:70632191-70632339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 121, 0 | 
| Conread position: | 332-480 | 
| Cow position: | chr3:42355711-42355855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 333-480 | 
| Cow position: | chr3:42933528-42933673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 132, 0 | 
| Conread position: | 334-480 | 
| Cow position: | chr3:79877075-79877220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 33, 132 | 
| Conread position: | 339-478 | 
| Cow position: | chr3:59997804-59997944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 342-479 | 
| Cow position: | chr3:66563839-66563977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 343-476 | 
| Cow position: | chr3:44415516-44415383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 346-463 | 
| Cow position: | chr3:3887579-3887464 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 346-471 | 
| Cow position: | chr3:2434677-2434555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 351-465 | 
| Cow position: | chr3:75975016-75974901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 109, 0 | 
| Conread position: | 351-473 | 
| Cow position: | chr3:52147378-52147256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 45, 61 | 
| Conread position: | 351-480 | 
| Cow position: | chr3:8999984-9000119 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 353-479 | 
| Cow position: | chr3:33443-33313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 355-463 | 
| Cow position: | chr3:8734877-8734769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 28, 6 | 
| Conread position: | 360-472 | 
| Cow position: | chr3:10453916-10454028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 361-468 | 
| Cow position: | chr3:5706542-5706433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 361-471 | 
| Cow position: | chr3:29385942-29386052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 374-478 | 
| Cow position: | chr3:74584274-74584379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 107 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 19, 93 | 
Show alignments to all cow chromosomes.
