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Cow genome map

           
Conread name:
           
Ss1.1-rsto212_a18.5
        

               
Conread position:
               
1-125
               

               
Cow position:
               
chr6:56502083-56502215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr6:54479423-54479577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr6:60467802-60467954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
59, 37
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr6:5329929-5330090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 26
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr6:14063884-14063720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 98
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr6:29077503-29077670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
36, 155
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr6:1002460-1002288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr6:12845091-12845262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
58, 85
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr6:17068045-17067865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr6:9375600-9375407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr6:34235659-34235471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 101
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr6:53345570-53345779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr6:21311984-21311764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr6:1817091-1816873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 163
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr6:2833101-2832883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr6:46391467-46391685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr6:66566230-66566451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr6:3374795-3374575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 155
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr6:10635951-10636167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
79, 72
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr6:11637971-11637760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
55, 26
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr6:64449166-64449386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr6:47327294-47327068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 157
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr6:32210852-32210630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
58, 155
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr6:30826260-30826033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr6:40264423-40264201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
36, 106
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr6:41824054-41823822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 168
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr6:28476956-28477178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
36, 90
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr6:58075999-58076229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr6:24327361-24327137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
36, 166
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr6:16410970-16411215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
57, 119
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr6:28343425-28343679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr6:34075798-34076081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
57, 26
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr6:46205792-46206067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 90
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr6:54885139-54884851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
32, 258
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr6:62479391-62479106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
58, 223
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr6:67304576-67304859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 180
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr6:52025877-52025594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr6:36928426-36928721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
60, 160
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr6:59688528-59688229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
61, 244
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr6:58589807-58590108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr6:67968851-67968512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 172
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr6:6769051-6769382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
36, 93
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr6:64721070-64721398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 138
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr6:130390-130047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 160
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr6:456955-457293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
21, 130
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr6:27110365-27110733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr6:13603241-13603610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 262
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr6:47383775-47384143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 228
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr6:58606056-58606421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 93
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr6:14696598-14696215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
45, 225
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr6:66874136-66874501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 89
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr6:16706781-16707165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
36, 98
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr6:45065232-45064864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 65
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr6:12551042-12551427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 162
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr6:28977257-28976884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
28, 117
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr6:68049210-68049574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 195
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr6:11169482-11169861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr6:42961593-42961205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 199
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr6:53651815-53652198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr6:54991218-54990843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 39
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr6:8318392-8318005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 157
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr6:35471752-35471341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 164
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr6:54867285-54867688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 123
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr6:66532027-66531649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
192, 36
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr6:8209815-8209428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr6:38218446-38218858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 143
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr6:21590491-21590899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 59
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr6:35842435-35842879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 23
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr6:397241-397700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr6:51835174-51835623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 107
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr6:21587647-21587208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 226
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr6:15305360-15305798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 36
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr6:54132592-54133038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 156
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr6:55688814-55689256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr6:63286736-63286271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 221
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr6:49398842-49398395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
32, 159
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr6:36202602-36203056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 161
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr6:37148971-37149417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 114
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr6:61269104-61269552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
1-460
               

               
Cow position:
               
chr6:7103461-7103003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
1-460
               

               
Cow position:
               
chr6:61113524-61114001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 296
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr6:54490966-54490508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 99
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:1770421-1769955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 173
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:7131097-7130622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
36, 85
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:10332322-10331859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
37, 140
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:10612634-10613069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 123
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:15242610-15243078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:16765618-16765159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 100
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:17090373-17090819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
56, 30
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:21004430-21004919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:23695772-23696233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:24468618-24468160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 222
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:26728752-26728305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
55, 158
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:28148025-28148503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:29210276-29210716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
36, 21
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:32125841-32126291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 157
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:38440956-38441419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 136
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:40031968-40032418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:46557832-46558293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 23
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:60144403-60143960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
31, 109
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:60473908-60474374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 154
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:60859532-60859059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 229
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:61631845-61631369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 246
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:66363470-66362993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 136
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:66433722-66434193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 118
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:68376528-68376076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 70
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr6:34251501-34251056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr6:52431258-52430777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 240
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr6:10106222-10105738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 165
               

               
Conread position:
               
1-471
               

               
Cow position:
               
chr6:27240207-27239758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
193, 43
               

               
Conread position:
               
1-471
               

               
Cow position:
               
chr6:33302184-33302643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 109
               

               
Conread position:
               
1-471
               

               
Cow position:
               
chr6:46465602-46466063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
1-471
               

               
Cow position:
               
chr6:51581485-51581008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 164
               

               
Conread position:
               
1-472
               

               
Cow position:
               
chr6:2547017-2547511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
1-472
               

               
Cow position:
               
chr6:18447734-18447267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 120
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr6:3621887-3622383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
48, 227
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr6:6264418-6264898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 101
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr6:15938074-15937603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr6:17557149-17557624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 229
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr6:18080740-18080267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 184
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr6:32867434-32866972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 150
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr6:44194771-44194305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 164
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr6:47519825-47520304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
63, 30
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr6:54365549-54365077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr6:16700033-16700506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 242
               

               
Conread position:
               
1-475
               

               
Cow position:
               
chr6:323536-323050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 192
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr6:6060783-6060319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
32, 107
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr6:53460797-53460319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 156
               

               
Conread position:
               
1-478
               

               
Cow position:
               
chr6:15301043-15300586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 92
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr6:53178414-53178882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr6:8562490-8562970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 161
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr6:13688037-13687561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr6:32121685-32122151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 156
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr6:34475769-34475301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr6:35181479-35181000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 116
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr6:50746755-50747260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 332
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr6:52478653-52478156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 170
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr6:53933066-53932589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 47
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr6:64431713-64432191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 155
               

               
Conread position:
               
2-191
               

               
Cow position:
               
chr6:55608031-55607841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 117
               

               
Conread position:
               
2-206
               

               
Cow position:
               
chr6:6642813-6642612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 36
               

               
Conread position:
               
2-208
               

               
Cow position:
               
chr6:1474971-1475179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr6:12387547-12387331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 13
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr6:50445986-50445766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
10, 157
               

               
Conread position:
               
2-216
               

               
Cow position:
               
chr6:39994686-39994463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
35, 160
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr6:22877381-22877117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr6:24652407-24652141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 6
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr6:52248360-52248079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
7, 39
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr6:607035-607323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
10, 195
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr6:5445404-5445685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 187
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr6:50120011-50119719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
35, 6
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr6:31635907-31635549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 21
               

               
Conread position:
               
2-365
               

               
Cow position:
               
chr6:4864759-4864403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
57, 29
               

               
Conread position:
               
2-377
               

               
Cow position:
               
chr6:63047349-63047748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-378
               

               
Cow position:
               
chr6:12500635-12501006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
35, 129
               

               
Conread position:
               
2-433
               

               
Cow position:
               
chr6:40774573-40774125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 99
               

               
Conread position:
               
2-463
               

               
Cow position:
               
chr6:13040227-13040692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
32, 161
               

               
Conread position:
               
2-463
               

               
Cow position:
               
chr6:44078297-44078754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 116
               

               
Conread position:
               
2-466
               

               
Cow position:
               
chr6:14949706-14949249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 195
               

               
Conread position:
               
2-471
               

               
Cow position:
               
chr6:16746115-16746593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 223
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr6:3929096-3929573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
54, 96
               

               
Conread position:
               
3-382
               

               
Cow position:
               
chr6:56376571-56376188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 34
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr6:41733403-41733862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 105
               

               
Conread position:
               
3-477
               

               
Cow position:
               
chr6:7190343-7189876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 136
               

               
Conread position:
               
3-479
               

               
Cow position:
               
chr6:67187467-67187931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
4-146
               

               
Cow position:
               
chr6:52002146-52002295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
4-146
               

               
Cow position:
               
chr6:60152813-60152963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
4-173
               

               
Cow position:
               
chr6:3719231-3719051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 160
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr6:10649241-10649063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 44
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr6:51398578-51398764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
33, 157
               

               
Conread position:
               
4-197
               

               
Cow position:
               
chr6:19508653-19508461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 126
               

               
Conread position:
               
4-202
               

               
Cow position:
               
chr6:20605711-20605919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
53, 156
               

               
Conread position:
               
4-202
               

               
Cow position:
               
chr6:25358854-25359058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr6:1783995-1783792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
33, 118
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr6:45160514-45160301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
53, 102
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr6:388948-389168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
33, 153
               

               
Conread position:
               
4-215
               

               
Cow position:
               
chr6:7824540-7824760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
4-221
               

               
Cow position:
               
chr6:642800-642562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
31, 223
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr6:10695646-10695874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
33, 154
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr6:69500107-69500331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
33, 140
               

               
Conread position:
               
4-228
               

               
Cow position:
               
chr6:2012796-2013028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
28, 154
               

               
Conread position:
               
4-237
               

               
Cow position:
               
chr6:53710895-53711134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
54, 40
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr6:47625182-47624944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
41, 33
               

               
Conread position:
               
4-261
               

               
Cow position:
               
chr6:602874-603135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
15, 117
               

               
Conread position:
               
4-261
               

               
Cow position:
               
chr6:47540303-47540571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
28, 181
               

               
Conread position:
               
4-272
               

               
Cow position:
               
chr6:3978886-3978612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
42, 220
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr6:16737798-16738072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
58, 156
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr6:25773604-25773331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
30, 104
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr6:18961745-18961453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
55, 81
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr6:60239611-60239333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
33, 196
               

               
Conread position:
               
4-323
               

               
Cow position:
               
chr6:48169722-48170040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 119
               

               
Conread position:
               
4-342
               

               
Cow position:
               
chr6:53401146-53401477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
28, 87
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr6:49002947-49002618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
50, 96
               

               
Conread position:
               
4-344
               

               
Cow position:
               
chr6:55143315-55142978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
4-358
               

               
Cow position:
               
chr6:55040440-55040077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 119
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr6:20098187-20097816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 154
               

               
Conread position:
               
4-365
               

               
Cow position:
               
chr6:18049248-18048883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
53, 96
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr6:60350522-60350147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 162
               

               
Conread position:
               
4-374
               

               
Cow position:
               
chr6:16625725-16626102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
55, 145
               

               
Conread position:
               
4-374
               

               
Cow position:
               
chr6:24004330-24004689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
4-375
               

               
Cow position:
               
chr6:57119151-57118788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 86
               

               
Conread position:
               
4-377
               

               
Cow position:
               
chr6:19681743-19681369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr6:47026258-47026637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 146
               

               
Conread position:
               
4-389
               

               
Cow position:
               
chr6:55475027-55475424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 23
               

               
Conread position:
               
4-412
               

               
Cow position:
               
chr6:36652204-36652615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
4-445
               

               
Cow position:
               
chr6:28482792-28483238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 221
               

               
Conread position:
               
4-449
               

               
Cow position:
               
chr6:54647745-54647274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 229
               

               
Conread position:
               
4-455
               

               
Cow position:
               
chr6:35990445-35990007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 114
               

               
Conread position:
               
4-457
               

               
Cow position:
               
chr6:12337762-12338223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 240
               

               
Conread position:
               
4-458
               

               
Cow position:
               
chr6:2582652-2583094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 145
               

               
Conread position:
               
4-458
               

               
Cow position:
               
chr6:5302627-5302168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
33, 98
               

               
Conread position:
               
4-459
               

               
Cow position:
               
chr6:31535793-31535338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 160
               

               
Conread position:
               
4-459
               

               
Cow position:
               
chr6:36195991-36196437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 154
               

               
Conread position:
               
4-463
               

               
Cow position:
               
chr6:8637052-8637506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
32, 153
               

               
Conread position:
               
4-463
               

               
Cow position:
               
chr6:14201475-14201931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 176
               

               
Conread position:
               
4-463
               

               
Cow position:
               
chr6:54140591-54141060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
55, 81
               

               
Conread position:
               
4-463
               

               
Cow position:
               
chr6:56849795-56850256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 94
               

               
Conread position:
               
4-463
               

               
Cow position:
               
chr6:65870801-65871270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 335
               

               
Conread position:
               
4-463
               

               
Cow position:
               
chr6:66087732-66088182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
28, 171
               

               
Conread position:
               
4-464
               

               
Cow position:
               
chr6:46860390-46859931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 157
               

               
Conread position:
               
4-467
               

               
Cow position:
               
chr6:46865822-46865342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 229
               

               
Conread position:
               
4-470
               

               
Cow position:
               
chr6:8804750-8804297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 99
               

               
Conread position:
               
4-472
               

               
Cow position:
               
chr6:43345681-43345192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 6
               

               
Conread position:
               
4-473
               

               
Cow position:
               
chr6:16103425-16102939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 94
               

               
Conread position:
               
4-473
               

               
Cow position:
               
chr6:27851927-27851454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
57, 99
               

               
Conread position:
               
4-478
               

               
Cow position:
               
chr6:18987994-18988443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 111
               

               
Conread position:
               
4-478
               

               
Cow position:
               
chr6:35539722-35539241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
4-480
               

               
Cow position:
               
chr6:4468524-4469020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 240
               

               
Conread position:
               
4-480
               

               
Cow position:
               
chr6:24781786-24781296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 238
               

               
Conread position:
               
4-480
               

               
Cow position:
               
chr6:48281772-48282251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 192
               

               
Conread position:
               
4-480
               

               
Cow position:
               
chr6:67214519-67215028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 217
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr6:59302048-59301857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
5-205
               

               
Cow position:
               
chr6:65862464-65862677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 174
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr6:40138927-40138723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 102
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr6:13741474-13741697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr6:57411424-57411627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
139, 52
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr6:54807001-54807225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
31, 214
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr6:20231047-20230787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
32, 110
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr6:5958238-5957974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
54, 36
               

               
Conread position:
               
5-313
               

               
Cow position:
               
chr6:44098863-44099178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
54, 232
               

               
Conread position:
               
5-335
               

               
Cow position:
               
chr6:38614602-38614926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 103
               

               
Conread position:
               
5-371
               

               
Cow position:
               
chr6:57164208-57164575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 239
               

               
Conread position:
               
5-373
               

               
Cow position:
               
chr6:35103549-35103176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 92
               

               
Conread position:
               
5-398
               

               
Cow position:
               
chr6:25407618-25407215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
36, 224
               

               
Conread position:
               
5-452
               

               
Cow position:
               
chr6:4383271-4383702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 95
               

               
Conread position:
               
5-452
               

               
Cow position:
               
chr6:41375531-41375998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 252
               

               
Conread position:
               
5-457
               

               
Cow position:
               
chr6:39358562-39358110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 102
               

               
Conread position:
               
5-458
               

               
Cow position:
               
chr6:34196370-34195928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 98
               

               
Conread position:
               
5-459
               

               
Cow position:
               
chr6:13367073-13367517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 146
               

               
Conread position:
               
5-459
               

               
Cow position:
               
chr6:38207717-38207250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 157
               

               
Conread position:
               
5-459
               

               
Cow position:
               
chr6:38853880-38853421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 160
               

               
Conread position:
               
5-459
               

               
Cow position:
               
chr6:61515419-61514963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 241
               

               
Conread position:
               
5-463
               

               
Cow position:
               
chr6:2607391-2607847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 155
               

               
Conread position:
               
5-463
               

               
Cow position:
               
chr6:21534837-21535279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
32, 102
               

               
Conread position:
               
5-463
               

               
Cow position:
               
chr6:54980880-54981369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
32, 236
               

               
Conread position:
               
5-473
               

               
Cow position:
               
chr6:9736861-9736395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
5-478
               

               
Cow position:
               
chr6:11192674-11192225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
32, 55
               

               
Conread position:
               
5-480
               

               
Cow position:
               
chr6:7801587-7801145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
58, 85
               

               
Conread position:
               
5-480
               

               
Cow position:
               
chr6:9008833-9008363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 151
               

               
Conread position:
               
5-480
               

               
Cow position:
               
chr6:10176523-10176043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
5-480
               

               
Cow position:
               
chr6:29239721-29240189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 105
               

               
Conread position:
               
6-217
               

               
Cow position:
               
chr6:30786369-30786156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
32, 95
               

               
Conread position:
               
6-225
               

               
Cow position:
               
chr6:20255607-20255392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
33, 154
               

               
Conread position:
               
6-240
               

               
Cow position:
               
chr6:14839247-14839006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 210
               

               
Conread position:
               
6-342
               

               
Cow position:
               
chr6:54369120-54368783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
51, 208
               

               
Conread position:
               
6-348
               

               
Cow position:
               
chr6:23248184-23247839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
31, 159
               

               
Conread position:
               
6-360
               

               
Cow position:
               
chr6:54600148-54600487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
189, 30
               

               
Conread position:
               
6-365
               

               
Cow position:
               
chr6:51893734-51893357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
32, 233
               

               
Conread position:
               
6-367
               

               
Cow position:
               
chr6:56842939-56843300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
57, 100
               

               
Conread position:
               
6-397
               

               
Cow position:
               
chr6:6343205-6343605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 212
               

               
Conread position:
               
6-461
               

               
Cow position:
               
chr6:67950738-67951194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 102
               

               
Conread position:
               
6-464
               

               
Cow position:
               
chr6:38771075-38771511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
6-479
               

               
Cow position:
               
chr6:7539352-7539828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 136
               

               
Conread position:
               
6-480
               

               
Cow position:
               
chr6:6063500-6063035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 107
               

               
Conread position:
               
7-201
               

               
Cow position:
               
chr6:7694573-7694365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
50, 67
               

               
Conread position:
               
7-245
               

               
Cow position:
               
chr6:21110749-21110996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
30, 102
               

               
Conread position:
               
7-463
               

               
Cow position:
               
chr6:22332618-22332156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
30, 224
               

               
Conread position:
               
7-474
               

               
Cow position:
               
chr6:54430599-54431086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 222
               

               
Conread position:
               
7-479
               

               
Cow position:
               
chr6:3952305-3952775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 30
               

               
Conread position:
               
7-480
               

               
Cow position:
               
chr6:58073825-58074307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
30, 153
               

               
Conread position:
               
8-164
               

               
Cow position:
               
chr6:21184737-21184902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
29, 152
               

               
Conread position:
               
8-185
               

               
Cow position:
               
chr6:20329802-20329991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 152
               

               
Conread position:
               
8-211
               

               
Cow position:
               
chr6:10605466-10605681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
23, 146
               

               
Conread position:
               
8-217
               

               
Cow position:
               
chr6:5462267-5462061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
49, 77
               

               
Conread position:
               
8-286
               

               
Cow position:
               
chr6:34031449-34031723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
29, 83
               

               
Conread position:
               
8-349
               

               
Cow position:
               
chr6:899503-899165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 144
               

               
Conread position:
               
8-359
               

               
Cow position:
               
chr6:63272832-63272474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
55, 176
               

               
Conread position:
               
8-365
               

               
Cow position:
               
chr6:31525830-31526190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
51, 98
               

               
Conread position:
               
8-365
               

               
Cow position:
               
chr6:35613628-35613273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
38, 145
               

               
Conread position:
               
8-377
               

               
Cow position:
               
chr6:42565467-42565843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 113
               

               
Conread position:
               
8-398
               

               
Cow position:
               
chr6:9026298-9026698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 148
               

               
Conread position:
               
8-459
               

               
Cow position:
               
chr6:36470782-36470343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 99
               

               
Conread position:
               
8-463
               

               
Cow position:
               
chr6:9246172-9245706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 58
               

               
Conread position:
               
8-463
               

               
Cow position:
               
chr6:35415740-35415278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
49, 231
               

               
Conread position:
               
8-472
               

               
Cow position:
               
chr6:5095769-5095294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 93
               

               
Conread position:
               
8-472
               

               
Cow position:
               
chr6:19401643-19402093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
24, 93
               

               
Conread position:
               
8-479
               

               
Cow position:
               
chr6:35435784-35436240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
26, 124
               

               
Conread position:
               
8-480
               

               
Cow position:
               
chr6:6201226-6201688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
9-216
               

               
Cow position:
               
chr6:15923215-15923001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
50, 30
               

               
Conread position:
               
9-222
               

               
Cow position:
               
chr6:242596-242814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
29, 95
               

               
Conread position:
               
10-261
               

               
Cow position:
               
chr6:48344111-48344372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
28, 144
               

               
Conread position:
               
10-277
               

               
Cow position:
               
chr6:6460325-6460597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
10-379
               

               
Cow position:
               
chr6:60442202-60442565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 121
               

               
Conread position:
               
10-463
               

               
Cow position:
               
chr6:8965873-8966327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
10-463
               

               
Cow position:
               
chr6:49421993-49421557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
53, 87
               

               
Conread position:
               
10-468
               

               
Cow position:
               
chr6:5609657-5609198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 151
               

               
Conread position:
               
10-473
               

               
Cow position:
               
chr6:45690810-45690370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 151
               

               
Conread position:
               
10-478
               

               
Cow position:
               
chr6:611344-611796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 148
               

               
Conread position:
               
10-478
               

               
Cow position:
               
chr6:50090423-50090900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 196
               

               
Conread position:
               
11-360
               

               
Cow position:
               
chr6:52562390-52562041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 187
               

               
Conread position:
               
12-218
               

               
Cow position:
               
chr6:61130697-61130477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
12-222
               

               
Cow position:
               
chr6:66453586-66453803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
24, 145
               

               
Conread position:
               
12-459
               

               
Cow position:
               
chr6:17997530-17997082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 220
               

               
Conread position:
               
13-194
               

               
Cow position:
               
chr6:59015776-59015584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
24, 117
               

               
Conread position:
               
13-468
               

               
Cow position:
               
chr6:65702615-65702165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
15, 177
               

               
Conread position:
               
13-478
               

               
Cow position:
               
chr6:59620455-59620910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 166
               

               
Conread position:
               
14-221
               

               
Cow position:
               
chr6:65904480-65904270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 159
               

               
Conread position:
               
14-261
               

               
Cow position:
               
chr6:3545484-3545734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
41, 140
               

               
Conread position:
               
14-314
               

               
Cow position:
               
chr6:24961932-24962238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
19, 140
               

               
Conread position:
               
14-404
               

               
Cow position:
               
chr6:47339562-47339171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 88
               

               
Conread position:
               
14-459
               

               
Cow position:
               
chr6:65903829-65903391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 159
               

               
Conread position:
               
14-463
               

               
Cow position:
               
chr6:62324777-62325232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
25, 143
               

               
Conread position:
               
15-242
               

               
Cow position:
               
chr6:24515405-24515174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 141
               

               
Conread position:
               
15-391
               

               
Cow position:
               
chr6:59069840-59069450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
18, 145
               

               
Conread position:
               
15-459
               

               
Cow position:
               
chr6:57405336-57404901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 88
               

               
Conread position:
               
15-463
               

               
Cow position:
               
chr6:2896539-2896980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
17, 69
               

               
Conread position:
               
15-463
               

               
Cow position:
               
chr6:53025010-53024572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
22, 75
               

               
Conread position:
               
16-216
               

               
Cow position:
               
chr6:46400616-46400413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
29, 92
               

               
Conread position:
               
16-222
               

               
Cow position:
               
chr6:50271305-50271093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
21, 134
               

               
Conread position:
               
16-457
               

               
Cow position:
               
chr6:240149-239686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
12, 128
               

               
Conread position:
               
16-480
               

               
Cow position:
               
chr6:53139140-53138682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
17, 171
               

               
Conread position:
               
17-179
               

               
Cow position:
               
chr6:17248526-17248694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 132
               

               
Conread position:
               
17-191
               

               
Cow position:
               
chr6:46666894-46667083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
17-222
               

               
Cow position:
               
chr6:52705921-52705717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 163
               

               
Conread position:
               
17-365
               

               
Cow position:
               
chr6:1886875-1886523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 164
               

               
Conread position:
               
18-176
               

               
Cow position:
               
chr6:31928064-31928221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
19-215
               

               
Cow position:
               
chr6:28080105-28079901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
15, 87
               

               
Conread position:
               
19-221
               

               
Cow position:
               
chr6:12629817-12630028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
45, 114
               

               
Conread position:
               
19-352
               

               
Cow position:
               
chr6:7989621-7989284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
9, 195
               

               
Conread position:
               
19-398
               

               
Cow position:
               
chr6:54864874-54864483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
19-473
               

               
Cow position:
               
chr6:21231329-21231761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 5
               

               
Conread position:
               
20-447
               

               
Cow position:
               
chr6:19695600-19696032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 91
               

               
Conread position:
               
20-480
               

               
Cow position:
               
chr6:31260780-31261257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 214
               

               
Conread position:
               
21-440
               

               
Cow position:
               
chr6:38641292-38641710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 87
               

               
Conread position:
               
21-459
               

               
Cow position:
               
chr6:32269073-32268652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
22-466
               

               
Cow position:
               
chr6:20157120-20157577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 129
               

               
Conread position:
               
22-475
               

               
Cow position:
               
chr6:445106-445579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 221
               

               
Conread position:
               
23-185
               

               
Cow position:
               
chr6:51463820-51463647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 139
               

               
Conread position:
               
24-272
               

               
Cow position:
               
chr6:48425524-48425274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
10, 77
               

               
Conread position:
               
24-459
               

               
Cow position:
               
chr6:66131105-66131554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
25-374
               

               
Cow position:
               
chr6:528478-528131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
27-183
               

               
Cow position:
               
chr6:46245522-46245354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
27-215
               

               
Cow position:
               
chr6:33276840-33277040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
27-473
               

               
Cow position:
               
chr6:55546359-55545923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
29, 90
               

               
Conread position:
               
28-167
               

               
Cow position:
               
chr6:21812532-21812678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
28-275
               

               
Cow position:
               
chr6:53731323-53731577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 212
               

               
Conread position:
               
28-334
               

               
Cow position:
               
chr6:22503121-22502798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 208
               

               
Conread position:
               
28-394
               

               
Cow position:
               
chr6:37199743-37199365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
32, 219
               

               
Conread position:
               
28-462
               

               
Cow position:
               
chr6:12652008-12652443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
35, 203
               

               
Conread position:
               
28-474
               

               
Cow position:
               
chr6:7128592-7128154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
28-480
               

               
Cow position:
               
chr6:47305141-47305597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 203
               

               
Conread position:
               
29-463
               

               
Cow position:
               
chr6:14914428-14913995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 26
               

               
Conread position:
               
29-463
               

               
Cow position:
               
chr6:28414844-28414398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 190
               

               
Conread position:
               
30-448
               

               
Cow position:
               
chr6:63720003-63720416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
30-449
               

               
Cow position:
               
chr6:12092180-12091761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
30-452
               

               
Cow position:
               
chr6:46292534-46292127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
30, 70
               

               
Conread position:
               
30-454
               

               
Cow position:
               
chr6:58732510-58732070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
33, 236
               

               
Conread position:
               
30-478
               

               
Cow position:
               
chr6:48187777-48187320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
31-366
               

               
Cow position:
               
chr6:16423504-16423846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
34, 76
               

               
Conread position:
               
31-390
               

               
Cow position:
               
chr6:16191472-16191840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
29, 14
               

               
Conread position:
               
31-443
               

               
Cow position:
               
chr6:52412659-52413081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 204
               

               
Conread position:
               
31-463
               

               
Cow position:
               
chr6:10400090-10399669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
31-474
               

               
Cow position:
               
chr6:37467734-37467287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 145
               

               
Conread position:
               
31-475
               

               
Cow position:
               
chr6:6400753-6401215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
31-480
               

               
Cow position:
               
chr6:9751235-9750785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
29, 87
               

               
Conread position:
               
32-458
               

               
Cow position:
               
chr6:29484897-29485317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
19, 127
               

               
Conread position:
               
33-457
               

               
Cow position:
               
chr6:21062076-21061658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
109, 39
               

               
Conread position:
               
33-463
               

               
Cow position:
               
chr6:60057850-60057399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
11, 149
               

               
Conread position:
               
33-464
               

               
Cow position:
               
chr6:53519816-53519376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
26, 104
               

               
Conread position:
               
35-480
               

               
Cow position:
               
chr6:63252114-63251665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 188
               

               
Conread position:
               
36-371
               

               
Cow position:
               
chr6:8788227-8787887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
24, 78
               

               
Conread position:
               
38-404
               

               
Cow position:
               
chr6:47799110-47799474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
44-480
               

               
Cow position:
               
chr6:3595617-3596051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
48-463
               

               
Cow position:
               
chr6:57546388-57545990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
52-466
               

               
Cow position:
               
chr6:31847388-31847002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
35, 88
               

               
Conread position:
               
52-480
               

               
Cow position:
               
chr6:26450149-26450550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
32, 101
               

               
Conread position:
               
53-276
               

               
Cow position:
               
chr6:633528-633303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 181
               

               
Conread position:
               
54-392
               

               
Cow position:
               
chr6:37783252-37783571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 136
               

               
Conread position:
               
54-410
               

               
Cow position:
               
chr6:48112038-48112382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
54-473
               

               
Cow position:
               
chr6:15243085-15243512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 105
               

               
Conread position:
               
56-242
               

               
Cow position:
               
chr6:59108778-59108969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
56-470
               

               
Cow position:
               
chr6:11246600-11247015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 95
               

               
Conread position:
               
57-217
               

               
Cow position:
               
chr6:32987161-32986999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 58
               

               
Conread position:
               
57-273
               

               
Cow position:
               
chr6:44984163-44984381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
30, 162
               

               
Conread position:
               
57-276
               

               
Cow position:
               
chr6:9838999-9839226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 193
               

               
Conread position:
               
57-374
               

               
Cow position:
               
chr6:19012906-19013216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
57-393
               

               
Cow position:
               
chr6:30973878-30974208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
30, 105
               

               
Conread position:
               
57-397
               

               
Cow position:
               
chr6:35993414-35993759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 178
               

               
Conread position:
               
57-463
               

               
Cow position:
               
chr6:6226861-6227247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
57-466
               

               
Cow position:
               
chr6:59798505-59798891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
216, 34
               

               
Conread position:
               
57-468
               

               
Cow position:
               
chr6:60819352-60819759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 173
               

               
Conread position:
               
57-473
               

               
Cow position:
               
chr6:15447371-15446944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 100
               

               
Conread position:
               
57-479
               

               
Cow position:
               
chr6:59104445-59104859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
30, 80
               

               
Conread position:
               
57-480
               

               
Cow position:
               
chr6:44566249-44566686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
30, 182
               

               
Conread position:
               
57-480
               

               
Cow position:
               
chr6:60783707-60784127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 55
               

               
Conread position:
               
59-283
               

               
Cow position:
               
chr6:40834634-40834407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
60-215
               

               
Cow position:
               
chr6:57274309-57274464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 41
               

               
Conread position:
               
60-337
               

               
Cow position:
               
chr6:12543093-12542814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 91
               

               
Conread position:
               
60-343
               

               
Cow position:
               
chr6:55763694-55763975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
60-397
               

               
Cow position:
               
chr6:16764802-16764470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
60-424
               

               
Cow position:
               
chr6:17334217-17333850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
27, 159
               

               
Conread position:
               
60-450
               

               
Cow position:
               
chr6:5114207-5113821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 92
               

               
Conread position:
               
60-459
               

               
Cow position:
               
chr6:24934790-24934377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 184
               

               
Conread position:
               
60-463
               

               
Cow position:
               
chr6:120079-120476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 92
               

               
Conread position:
               
60-465
               

               
Cow position:
               
chr6:60850550-60850138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
27, 174
               

               
Conread position:
               
60-478
               

               
Cow position:
               
chr6:65264695-65264299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 38
               

               
Conread position:
               
60-479
               

               
Cow position:
               
chr6:8125172-8125584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
61-362
               

               
Cow position:
               
chr6:47640596-47640291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
26, 94
               

               
Conread position:
               
61-454
               

               
Cow position:
               
chr6:39093585-39093975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
61-466
               

               
Cow position:
               
chr6:12668948-12669340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
61-468
               

               
Cow position:
               
chr6:47574746-47575135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 93
               

               
Conread position:
               
64-379
               

               
Cow position:
               
chr6:376973-377279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 153
               

               
Conread position:
               
64-478
               

               
Cow position:
               
chr6:50577370-50577771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
121, 26
               

               
Conread position:
               
65-465
               

               
Cow position:
               
chr6:48010680-48010283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
22, 147
               

               
Conread position:
               
66-468
               

               
Cow position:
               
chr6:38609814-38610218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 9
               

               
Conread position:
               
68-284
               

               
Cow position:
               
chr6:57298868-57299077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
68-374
               

               
Cow position:
               
chr6:58590122-58590426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
19, 85
               

               
Conread position:
               
68-389
               

               
Cow position:
               
chr6:67323164-67323477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
19, 114
               

               
Conread position:
               
68-390
               

               
Cow position:
               
chr6:582428-582104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 87
               

               
Conread position:
               
68-453
               

               
Cow position:
               
chr6:19755229-19754849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
19, 85
               

               
Conread position:
               
68-453
               

               
Cow position:
               
chr6:60739863-60740239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 162
               

               
Conread position:
               
68-457
               

               
Cow position:
               
chr6:19446108-19446486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 83
               

               
Conread position:
               
68-459
               

               
Cow position:
               
chr6:19264652-19264266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 86
               

               
Conread position:
               
68-463
               

               
Cow position:
               
chr6:47355672-47356065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
68-463
               

               
Cow position:
               
chr6:63094081-63093675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 124
               

               
Conread position:
               
68-467
               

               
Cow position:
               
chr6:4692136-4691721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 279
               

               
Conread position:
               
68-473
               

               
Cow position:
               
chr6:50984072-50984471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 149
               

               
Conread position:
               
68-480
               

               
Cow position:
               
chr6:3464132-3464550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
19, 259
               

               
Conread position:
               
69-474
               

               
Cow position:
               
chr6:58370593-58371000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 218
               

               
Conread position:
               
70-240
               

               
Cow position:
               
chr6:415944-416121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 151
               

               
Conread position:
               
70-242
               

               
Cow position:
               
chr6:18968925-18968756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
71-462
               

               
Cow position:
               
chr6:6965534-6965157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
71-463
               

               
Cow position:
               
chr6:9219124-9219502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
18, 83
               

               
Conread position:
               
72-460
               

               
Cow position:
               
chr6:54036283-54035904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
72-463
               

               
Cow position:
               
chr6:46283146-46282753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
75-459
               

               
Cow position:
               
chr6:17817130-17816760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
76-444
               

               
Cow position:
               
chr6:9719069-9718697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
77-390
               

               
Cow position:
               
chr6:16316163-16316485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
77-474
               

               
Cow position:
               
chr6:19996477-19996867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
77-477
               

               
Cow position:
               
chr6:4559446-4559048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
78-205
               

               
Cow position:
               
chr6:50509536-50509663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 105
               

               
Conread position:
               
79-379
               

               
Cow position:
               
chr6:12845242-12845537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
79-425
               

               
Cow position:
               
chr6:36189557-36189901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
115, 137
               

               
Conread position:
               
83-346
               

               
Cow position:
               
chr6:54936442-54936704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 130
               

               
Conread position:
               
83-463
               

               
Cow position:
               
chr6:28156282-28155934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 26
               

               
Conread position:
               
83-471
               

               
Cow position:
               
chr6:1371362-1370983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
68, 5
               

               
Conread position:
               
83-473
               

               
Cow position:
               
chr6:54623118-54622714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 40
               

               
Conread position:
               
83-478
               

               
Cow position:
               
chr6:48988301-48988688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
63, 134
               

               
Conread position:
               
83-480
               

               
Cow position:
               
chr6:60118010-60118398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
18, 134
               

               
Conread position:
               
84-425
               

               
Cow position:
               
chr6:57571342-57571679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 66
               

               
Conread position:
               
86-284
               

               
Cow position:
               
chr6:29266072-29266266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
86-466
               

               
Cow position:
               
chr6:43135077-43134699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 93
               

               
Conread position:
               
86-480
               

               
Cow position:
               
chr6:30123325-30122910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
87-229
               

               
Cow position:
               
chr6:19351286-19351143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
105, 63
               

               
Conread position:
               
87-478
               

               
Cow position:
               
chr6:62669742-62670125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
88-222
               

               
Cow position:
               
chr6:44756911-44757041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
88-348
               

               
Cow position:
               
chr6:61608380-61608639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
105, 65
               

               
Conread position:
               
88-381
               

               
Cow position:
               
chr6:3081261-3080956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
88-438
               

               
Cow position:
               
chr6:47833245-47832898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
88-463
               

               
Cow position:
               
chr6:21399884-21399515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
63, 102
               

               
Conread position:
               
88-473
               

               
Cow position:
               
chr6:53841630-53841255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 63
               

               
Conread position:
               
88-478
               

               
Cow position:
               
chr6:17313603-17313992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 63
               

               
Conread position:
               
88-478
               

               
Cow position:
               
chr6:67456582-67456992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
64, 128
               

               
Conread position:
               
88-480
               

               
Cow position:
               
chr6:21234913-21235303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
190, 63
               

               
Conread position:
               
88-480
               

               
Cow position:
               
chr6:38640100-38640486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 65
               

               
Conread position:
               
89-372
               

               
Cow position:
               
chr6:60667291-60667561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
54, 22
               

               
Conread position:
               
90-261
               

               
Cow position:
               
chr6:358019-357847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
57, 144
               

               
Conread position:
               
92-478
               

               
Cow position:
               
chr6:35725968-35726345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 130
               

               
Conread position:
               
93-274
               

               
Cow position:
               
chr6:38233834-38234011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 24
               

               
Conread position:
               
93-362
               

               
Cow position:
               
chr6:20206150-20206416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
49, 32
               

               
Conread position:
               
93-460
               

               
Cow position:
               
chr6:62929370-62929734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
50, 75
               

               
Conread position:
               
93-478
               

               
Cow position:
               
chr6:23402115-23401740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 55
               

               
Conread position:
               
94-466
               

               
Cow position:
               
chr6:22850369-22850010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 12
               

               
Conread position:
               
96-479
               

               
Cow position:
               
chr6:50467012-50467396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 60
               

               
Conread position:
               
97-463
               

               
Cow position:
               
chr6:55186694-55186329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
96, 118
               

               
Conread position:
               
97-473
               

               
Cow position:
               
chr6:10225761-10225402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
95, 52
               

               
Conread position:
               
100-276
               

               
Cow position:
               
chr6:44127487-44127665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
100-378
               

               
Cow position:
               
chr6:54573124-54573417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 197
               

               
Conread position:
               
100-451
               

               
Cow position:
               
chr6:16261667-16262008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
100-463
               

               
Cow position:
               
chr6:25615221-25614851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
95, 28
               

               
Conread position:
               
100-463
               

               
Cow position:
               
chr6:32287519-32287870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 51
               

               
Conread position:
               
100-480
               

               
Cow position:
               
chr6:17704700-17705090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
101-247
               

               
Cow position:
               
chr6:61644954-61644801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
101-479
               

               
Cow position:
               
chr6:46462515-46462126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
96, 16
               

               
Conread position:
               
102-480
               

               
Cow position:
               
chr6:54854132-54854508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
179, 68
               

               
Conread position:
               
103-376
               

               
Cow position:
               
chr6:58597620-58597350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
150, 50
               

               
Conread position:
               
103-425
               

               
Cow position:
               
chr6:21514735-21514405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 125
               

               
Conread position:
               
103-463
               

               
Cow position:
               
chr6:33206630-33206968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
104-480
               

               
Cow position:
               
chr6:55209441-55209816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
47, 113
               

               
Conread position:
               
106-242
               

               
Cow position:
               
chr6:56849030-56848893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
86, 36
               

               
Conread position:
               
107-394
               

               
Cow position:
               
chr6:55161353-55161643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
87, 123
               

               
Conread position:
               
107-474
               

               
Cow position:
               
chr6:10039609-10039979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 78
               

               
Conread position:
               
107-474
               

               
Cow position:
               
chr6:46173370-46173009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
37, 85
               

               
Conread position:
               
108-466
               

               
Cow position:
               
chr6:14166819-14166450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
15, 107
               

               
Conread position:
               
108-477
               

               
Cow position:
               
chr6:51526380-51526747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
81, 107
               

               
Conread position:
               
111-480
               

               
Cow position:
               
chr6:16266611-16266986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
43, 36
               

               
Conread position:
               
112-383
               

               
Cow position:
               
chr6:54809499-54809226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
10, 77
               

               
Conread position:
               
113-453
               

               
Cow position:
               
chr6:8161802-8161456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
30, 8
               

               
Conread position:
               
114-466
               

               
Cow position:
               
chr6:62371286-62370945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
115-479
               

               
Cow position:
               
chr6:54208243-54207877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 21
               

               
Conread position:
               
117-378
               

               
Cow position:
               
chr6:20196395-20196146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
118-403
               

               
Cow position:
               
chr6:3592300-3592579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
134, 51
               

               
Conread position:
               
119-447
               

               
Cow position:
               
chr6:61524301-61523981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
170, 34
               

               
Conread position:
               
122-471
               

               
Cow position:
               
chr6:13564987-13565332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
123-463
               

               
Cow position:
               
chr6:19292702-19293037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 86
               

               
Conread position:
               
125-453
               

               
Cow position:
               
chr6:60150806-60150474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
168, 45
               

               
Conread position:
               
126-457
               

               
Cow position:
               
chr6:17794849-17794522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
163, 40
               

               
Conread position:
               
126-463
               

               
Cow position:
               
chr6:17549074-17548729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
62, 25
               

               
Conread position:
               
129-458
               

               
Cow position:
               
chr6:19045534-19045862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 88
               

               
Conread position:
               
129-462
               

               
Cow position:
               
chr6:44867631-44867309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
129-480
               

               
Cow position:
               
chr6:60274098-60273755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
60, 24
               

               
Conread position:
               
130-376
               

               
Cow position:
               
chr6:58608534-58608289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
12, 93
               

               
Conread position:
               
130-463
               

               
Cow position:
               
chr6:143457-143139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
151, 19
               

               
Conread position:
               
131-480
               

               
Cow position:
               
chr6:24110196-24110539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
136-479
               

               
Cow position:
               
chr6:40049985-40050331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
57, 99
               

               
Conread position:
               
137-318
               

               
Cow position:
               
chr6:54365085-54364895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
138-446
               

               
Cow position:
               
chr6:55205393-55205085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
56, 13
               

               
Conread position:
               
138-453
               

               
Cow position:
               
chr6:22525250-22525554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 92
               

               
Conread position:
               
138-479
               

               
Cow position:
               
chr6:23025193-23024841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
140-397
               

               
Cow position:
               
chr6:23466108-23465857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 13
               

               
Conread position:
               
141-463
               

               
Cow position:
               
chr6:16288130-16287828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
141-480
               

               
Cow position:
               
chr6:5330336-5330667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
141-480
               

               
Cow position:
               
chr6:33509712-33510044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
48, 10
               

               
Conread position:
               
142-463
               

               
Cow position:
               
chr6:24536618-24536287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 14
               

               
Conread position:
               
142-473
               

               
Cow position:
               
chr6:8599926-8600255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
10, 80
               

               
Conread position:
               
146-474
               

               
Cow position:
               
chr6:6724430-6724759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
149-411
               

               
Cow position:
               
chr6:36284171-36284429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
43, 77
               

               
Conread position:
               
149-451
               

               
Cow position:
               
chr6:60516757-60517065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
149-463
               

               
Cow position:
               
chr6:23353482-23353795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
151-471
               

               
Cow position:
               
chr6:12964785-12965101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
153-381
               

               
Cow position:
               
chr6:11830128-11830347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 56
               

               
Conread position:
               
153-435
               

               
Cow position:
               
chr6:67643758-67643478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
153-459
               

               
Cow position:
               
chr6:22215535-22215227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
153-459
               

               
Cow position:
               
chr6:22985925-22985627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
42, 73
               

               
Conread position:
               
153-463
               

               
Cow position:
               
chr6:17068716-17068416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
153-463
               

               
Cow position:
               
chr6:32043785-32044089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
136, 40
               

               
Conread position:
               
153-466
               

               
Cow position:
               
chr6:581811-581498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
153-472
               

               
Cow position:
               
chr6:694214-693895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
134, 40
               

               
Conread position:
               
153-475
               

               
Cow position:
               
chr6:9302783-9302472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
12, 63
               

               
Conread position:
               
153-476
               

               
Cow position:
               
chr6:24339217-24339540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
153-480
               

               
Cow position:
               
chr6:37395475-37395143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 245
               

               
Conread position:
               
154-391
               

               
Cow position:
               
chr6:61142630-61142391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 79
               

               
Conread position:
               
154-474
               

               
Cow position:
               
chr6:67281831-67282143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
41, 62
               

               
Conread position:
               
155-425
               

               
Cow position:
               
chr6:2153657-2153395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
69, 17
               

               
Conread position:
               
155-463
               

               
Cow position:
               
chr6:18118117-18117809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
40, 79
               

               
Conread position:
               
156-379
               

               
Cow position:
               
chr6:54185411-54185184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
125, 82
               

               
Conread position:
               
156-463
               

               
Cow position:
               
chr6:68272517-68272842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 240
               

               
Conread position:
               
156-466
               

               
Cow position:
               
chr6:55030251-55030576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
156-479
               

               
Cow position:
               
chr6:13510110-13510426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
157-423
               

               
Cow position:
               
chr6:59631987-59631719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
157-436
               

               
Cow position:
               
chr6:17954312-17954035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
157-480
               

               
Cow position:
               
chr6:5845235-5844912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
159-463
               

               
Cow position:
               
chr6:3329936-3330235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
161-480
               

               
Cow position:
               
chr6:51530245-51529933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
162-459
               

               
Cow position:
               
chr6:18144135-18144436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
129, 62
               

               
Conread position:
               
163-462
               

               
Cow position:
               
chr6:6195168-6194864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
31, 66
               

               
Conread position:
               
163-466
               

               
Cow position:
               
chr6:7627905-7628211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
169-473
               

               
Cow position:
               
chr6:18608866-18608560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
170-463
               

               
Cow position:
               
chr6:47958766-47959044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
172-450
               

               
Cow position:
               
chr6:68816118-68816396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
172-463
               

               
Cow position:
               
chr6:56986694-56986409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
8, 55
               

               
Conread position:
               
175-450
               

               
Cow position:
               
chr6:2584896-2585167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
20, 59
               

               
Conread position:
               
175-473
               

               
Cow position:
               
chr6:2078865-2078568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
18, 191
               

               
Conread position:
               
175-478
               

               
Cow position:
               
chr6:3350974-3351284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 209
               

               
Conread position:
               
175-478
               

               
Cow position:
               
chr6:55417572-55417279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
175-480
               

               
Cow position:
               
chr6:94235-93943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
18, 40
               

               
Conread position:
               
176-472
               

               
Cow position:
               
chr6:31806978-31806677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
176-477
               

               
Cow position:
               
chr6:62437370-62437670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
111, 56
               

               
Conread position:
               
177-397
               

               
Cow position:
               
chr6:55535792-55535576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
177-463
               

               
Cow position:
               
chr6:67451415-67451133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
178-480
               

               
Cow position:
               
chr6:62683327-62683631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
181-463
               

               
Cow position:
               
chr6:44623568-44623852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
187-463
               

               
Cow position:
               
chr6:48097633-48097364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
91, 26
               

               
Conread position:
               
189-463
               

               
Cow position:
               
chr6:67728341-67728617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
189-473
               

               
Cow position:
               
chr6:56393743-56394023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
92, 31
               

               
Conread position:
               
191-440
               

               
Cow position:
               
chr6:36921002-36920759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
177, 17
               

               
Conread position:
               
193-471
               

               
Cow position:
               
chr6:47540872-47540593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
193-473
               

               
Cow position:
               
chr6:50504428-50504705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
193-473
               

               
Cow position:
               
chr6:57089171-57089452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
90, 38
               

               
Conread position:
               
194-397
               

               
Cow position:
               
chr6:19131405-19131606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
95, 38
               

               
Conread position:
               
194-460
               

               
Cow position:
               
chr6:49437308-49437567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
194-461
               

               
Cow position:
               
chr6:60266206-60265931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
95, 33
               

               
Conread position:
               
194-471
               

               
Cow position:
               
chr6:41015001-41014726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
194-473
               

               
Cow position:
               
chr6:63065800-63066089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
194-480
               

               
Cow position:
               
chr6:47778849-47779133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
196-416
               

               
Cow position:
               
chr6:55502743-55502965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
196-451
               

               
Cow position:
               
chr6:60121622-60121369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
100, 17
               

               
Conread position:
               
197-378
               

               
Cow position:
               
chr6:53089986-53090165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
92, 16
               

               
Conread position:
               
197-480
               

               
Cow position:
               
chr6:21293518-21293241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
198-480
               

               
Cow position:
               
chr6:50862920-50863202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
95, 15
               

               
Conread position:
               
199-462
               

               
Cow position:
               
chr6:42567472-42567734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
199-479
               

               
Cow position:
               
chr6:36809227-36808948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
66, 46
               

               
Conread position:
               
200-480
               

               
Cow position:
               
chr6:35727823-35728104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
6, 11
               

               
Conread position:
               
201-463
               

               
Cow position:
               
chr6:35319153-35318895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
7, 48
               

               
Conread position:
               
202-480
               

               
Cow position:
               
chr6:62056596-62056871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
84, 28
               

               
Conread position:
               
203-463
               

               
Cow position:
               
chr6:1103752-1103506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
204-397
               

               
Cow position:
               
chr6:60451407-60451602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
29, 46
               

               
Conread position:
               
207-473
               

               
Cow position:
               
chr6:55404892-55405165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
76, 21
               

               
Conread position:
               
207-476
               

               
Cow position:
               
chr6:37827968-37827698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
6, 26
               

               
Conread position:
               
210-480
               

               
Cow position:
               
chr6:22205041-22204765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
40, 5
               

               
Conread position:
               
210-480
               

               
Cow position:
               
chr6:51666353-51666080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
26, 5
               

               
Conread position:
               
215-463
               

               
Cow position:
               
chr6:21475720-21475964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
74, 143
               

               
Conread position:
               
217-478
               

               
Cow position:
               
chr6:57079417-57079680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
218-454
               

               
Cow position:
               
chr6:48379619-48379381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
219-480
               

               
Cow position:
               
chr6:8688850-8688595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
222-463
               

               
Cow position:
               
chr6:54831476-54831717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
67, 140
               

               
Conread position:
               
224-480
               

               
Cow position:
               
chr6:63426668-63426918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
225-478
               

               
Cow position:
               
chr6:58304417-58304666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
225-478
               

               
Cow position:
               
chr6:68643991-68644245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
227-424
               

               
Cow position:
               
chr6:49096444-49096250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
179, 12
               

               
Conread position:
               
228-462
               

               
Cow position:
               
chr6:58725376-58725605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
61, 80
               

               
Conread position:
               
228-463
               

               
Cow position:
               
chr6:5820241-5820021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
228-463
               

               
Cow position:
               
chr6:14063303-14063049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
228-463
               

               
Cow position:
               
chr6:26155155-26155384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
228-463
               

               
Cow position:
               
chr6:53546041-53546268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
61, 149
               

               
Conread position:
               
228-477
               

               
Cow position:
               
chr6:21470423-21470176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
65, 132
               

               
Conread position:
               
228-480
               

               
Cow position:
               
chr6:54846273-54846019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
228-480
               

               
Cow position:
               
chr6:55548529-55548278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
228-480
               

               
Cow position:
               
chr6:67069809-67069559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
61, 37
               

               
Conread position:
               
230-477
               

               
Cow position:
               
chr6:37692759-37693009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
230-478
               

               
Cow position:
               
chr6:16380547-16380804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
230-480
               

               
Cow position:
               
chr6:64429188-64428939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
63, 86
               

               
Conread position:
               
231-470
               

               
Cow position:
               
chr6:47782866-47783113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
231-471
               

               
Cow position:
               
chr6:61109796-61110029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
72, 48
               

               
Conread position:
               
231-480
               

               
Cow position:
               
chr6:13653362-13653602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
211, 58
               

               
Conread position:
               
231-480
               

               
Cow position:
               
chr6:30023894-30024137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
55, 150
               

               
Conread position:
               
232-447
               

               
Cow position:
               
chr6:18599249-18599027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
10, 198
               

               
Conread position:
               
232-447
               

               
Cow position:
               
chr6:23110190-23109968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 175
               

               
Conread position:
               
232-466
               

               
Cow position:
               
chr6:12928156-12928382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
232-473
               

               
Cow position:
               
chr6:56799889-56799642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 145
               

               
Conread position:
               
232-478
               

               
Cow position:
               
chr6:32453395-32453650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 116
               

               
Conread position:
               
232-480
               

               
Cow position:
               
chr6:18955066-18954836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
233-447
               

               
Cow position:
               
chr6:33450959-33450754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
233-449
               

               
Cow position:
               
chr6:61681088-61681303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
56, 138
               

               
Conread position:
               
233-463
               

               
Cow position:
               
chr6:1475356-1475576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 143
               

               
Conread position:
               
233-463
               

               
Cow position:
               
chr6:42034783-42035009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 76
               

               
Conread position:
               
233-471
               

               
Cow position:
               
chr6:29775633-29775866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
56, 93
               

               
Conread position:
               
233-477
               

               
Cow position:
               
chr6:60850712-60850953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
233-477
               

               
Cow position:
               
chr6:66839209-66839448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
228, 39
               

               
Conread position:
               
233-478
               

               
Cow position:
               
chr6:4144652-4144896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 51
               

               
Conread position:
               
233-480
               

               
Cow position:
               
chr6:144768-145008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
56, 13
               

               
Conread position:
               
234-446
               

               
Cow position:
               
chr6:1871186-1870975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 165
               

               
Conread position:
               
234-463
               

               
Cow position:
               
chr6:50269671-50269443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
234-473
               

               
Cow position:
               
chr6:48157388-48157139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
234-479
               

               
Cow position:
               
chr6:1941820-1941579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
54, 64
               

               
Conread position:
               
234-480
               

               
Cow position:
               
chr6:34560993-34560743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
235-452
               

               
Cow position:
               
chr6:8731421-8731647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 108
               

               
Conread position:
               
235-466
               

               
Cow position:
               
chr6:30502111-30501882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
210, 51
               

               
Conread position:
               
235-473
               

               
Cow position:
               
chr6:53145670-53145429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
237-458
               

               
Cow position:
               
chr6:12623530-12623743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 85
               

               
Conread position:
               
238-479
               

               
Cow position:
               
chr6:1866749-1866988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
51, 5
               

               
Conread position:
               
238-480
               

               
Cow position:
               
chr6:66947802-66947564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
204, 47
               

               
Conread position:
               
239-455
               

               
Cow position:
               
chr6:2014146-2014357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
214, 93
               

               
Conread position:
               
241-463
               

               
Cow position:
               
chr6:28089029-28088808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
48, 121
               

               
Conread position:
               
241-480
               

               
Cow position:
               
chr6:21715067-21715307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
40, 139
               

               
Conread position:
               
241-480
               

               
Cow position:
               
chr6:57962385-57962143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
37, 110
               

               
Conread position:
               
244-473
               

               
Cow position:
               
chr6:50771338-50771113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
244-474
               

               
Cow position:
               
chr6:62078945-62079168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
245-474
               

               
Cow position:
               
chr6:8365834-8366064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
246-463
               

               
Cow position:
               
chr6:55054059-55054278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
246-478
               

               
Cow position:
               
chr6:1030231-1030006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
247-461
               

               
Cow position:
               
chr6:33150267-33150057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
247-463
               

               
Cow position:
               
chr6:67574412-67574629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
247-472
               

               
Cow position:
               
chr6:42483440-42483663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
249-428
               

               
Cow position:
               
chr6:21467237-21467061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
38, 45
               

               
Conread position:
               
252-428
               

               
Cow position:
               
chr6:31865128-31865299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
252-449
               

               
Cow position:
               
chr6:65535141-65534943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
252-460
               

               
Cow position:
               
chr6:55376148-55375938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
252-461
               

               
Cow position:
               
chr6:54127783-54127584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
252-463
               

               
Cow position:
               
chr6:42728675-42728885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
252-463
               

               
Cow position:
               
chr6:67462926-67462714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
252-465
               

               
Cow position:
               
chr6:66259759-66259979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
35, 187
               

               
Conread position:
               
252-479
               

               
Cow position:
               
chr6:48435864-48436083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
252-480
               

               
Cow position:
               
chr6:1090610-1090839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
252-480
               

               
Cow position:
               
chr6:24183529-24183301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
36, 214
               

               
Conread position:
               
252-480
               

               
Cow position:
               
chr6:28852003-28852231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
32, 214
               

               
Conread position:
               
252-480
               

               
Cow position:
               
chr6:47648206-47647979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
252-480
               

               
Cow position:
               
chr6:51541039-51541269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
252-480
               

               
Cow position:
               
chr6:56022519-56022296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
253-446
               

               
Cow position:
               
chr6:57295760-57295954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
253-459
               

               
Cow position:
               
chr6:43787880-43787673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
253-480
               

               
Cow position:
               
chr6:16090934-16091152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
36, 116
               

               
Conread position:
               
254-466
               

               
Cow position:
               
chr6:55297063-55296850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
254-470
               

               
Cow position:
               
chr6:51553173-51553391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
254-474
               

               
Cow position:
               
chr6:14056438-14056218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
35, 175
               

               
Conread position:
               
254-478
               

               
Cow position:
               
chr6:8369456-8369677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
255-459
               

               
Cow position:
               
chr6:12761312-12761515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 71
               

               
Conread position:
               
255-463
               

               
Cow position:
               
chr6:64380468-64380677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
255-480
               

               
Cow position:
               
chr6:22876898-22876672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
255-480
               

               
Cow position:
               
chr6:62707694-62707468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 128
               

               
Conread position:
               
256-463
               

               
Cow position:
               
chr6:33278404-33278612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
257-472
               

               
Cow position:
               
chr6:8468700-8468907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 140
               

               
Conread position:
               
259-463
               

               
Cow position:
               
chr6:29853028-29852816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
259-480
               

               
Cow position:
               
chr6:56061697-56061919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
260-428
               

               
Cow position:
               
chr6:69153445-69153616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
260-478
               

               
Cow position:
               
chr6:45921176-45920963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 119
               

               
Conread position:
               
263-454
               

               
Cow position:
               
chr6:52069521-52069712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
263-463
               

               
Cow position:
               
chr6:15587556-15587353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
264-463
               

               
Cow position:
               
chr6:62724597-62724797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
24, 96
               

               
Conread position:
               
264-466
               

               
Cow position:
               
chr6:6614662-6614867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
264-478
               

               
Cow position:
               
chr6:24491070-24491284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
25, 124
               

               
Conread position:
               
265-475
               

               
Cow position:
               
chr6:13742031-13742239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
265-479
               

               
Cow position:
               
chr6:20075838-20076052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
265-480
               

               
Cow position:
               
chr6:11867237-11867021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
266-479
               

               
Cow position:
               
chr6:1173913-1173693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
268-476
               

               
Cow position:
               
chr6:36537315-36537109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 109
               

               
Conread position:
               
268-480
               

               
Cow position:
               
chr6:54848972-54849188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
270-462
               

               
Cow position:
               
chr6:25773168-25772981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
108, 16
               

               
Conread position:
               
270-463
               

               
Cow position:
               
chr6:66978915-66979110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
116, 47
               

               
Conread position:
               
270-464
               

               
Cow position:
               
chr6:50883630-50883439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 104
               

               
Conread position:
               
270-472
               

               
Cow position:
               
chr6:23058259-23058462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
270-479
               

               
Cow position:
               
chr6:44544096-44543887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
189, 23
               

               
Conread position:
               
270-479
               

               
Cow position:
               
chr6:47642795-47642999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
112, 10
               

               
Conread position:
               
270-480
               

               
Cow position:
               
chr6:55517923-55518132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
21, 115
               

               
Conread position:
               
271-416
               

               
Cow position:
               
chr6:58076442-58076588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
271-468
               

               
Cow position:
               
chr6:19563437-19563235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
271-472
               

               
Cow position:
               
chr6:8315431-8315635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
271-472
               

               
Cow position:
               
chr6:56582011-56581807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 96
               

               
Conread position:
               
271-480
               

               
Cow position:
               
chr6:15974473-15974269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
277-473
               

               
Cow position:
               
chr6:57299813-57300021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
279-463
               

               
Cow position:
               
chr6:57467653-57467838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
279-478
               

               
Cow position:
               
chr6:33960591-33960391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
104, 6
               

               
Conread position:
               
280-451
               

               
Cow position:
               
chr6:61644801-61644629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
280-460
               

               
Cow position:
               
chr6:56937009-56936829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
280-468
               

               
Cow position:
               
chr6:35985079-35984890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
280-470
               

               
Cow position:
               
chr6:55014936-55015129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
7, 156
               

               
Conread position:
               
280-479
               

               
Cow position:
               
chr6:53711458-53711656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
282-463
               

               
Cow position:
               
chr6:63168706-63168524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
286-433
               

               
Cow position:
               
chr6:30895927-30895781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
286-479
               

               
Cow position:
               
chr6:34076226-34076418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
44, 100
               

               
Conread position:
               
287-451
               

               
Cow position:
               
chr6:48792843-48793007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
89, 74
               

               
Conread position:
               
287-463
               

               
Cow position:
               
chr6:53811648-53811825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
287-463
               

               
Cow position:
               
chr6:59297118-59297284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
287-466
               

               
Cow position:
               
chr6:63020408-63020584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
287-474
               

               
Cow position:
               
chr6:4760056-4760243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 109
               

               
Conread position:
               
287-479
               

               
Cow position:
               
chr6:4699773-4699956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
288-459
               

               
Cow position:
               
chr6:45094639-45094813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
290-450
               

               
Cow position:
               
chr6:40682597-40682442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
290-477
               

               
Cow position:
               
chr6:7291384-7291564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
291-480
               

               
Cow position:
               
chr6:29851438-29851622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
292-478
               

               
Cow position:
               
chr6:31471146-31471333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
293-472
               

               
Cow position:
               
chr6:38032929-38033104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
293-478
               

               
Cow position:
               
chr6:28559609-28559794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
58, 84
               

               
Conread position:
               
294-463
               

               
Cow position:
               
chr6:62805715-62805884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
294-468
               

               
Cow position:
               
chr6:54820904-54821078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
294-472
               

               
Cow position:
               
chr6:58666748-58666571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
294-480
               

               
Cow position:
               
chr6:48893859-48893673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
295-443
               

               
Cow position:
               
chr6:33290042-33290191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
295-447
               

               
Cow position:
               
chr6:17172900-17173051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
295-453
               

               
Cow position:
               
chr6:31520943-31521100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
295-454
               

               
Cow position:
               
chr6:52454374-52454215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
295-461
               

               
Cow position:
               
chr6:47245854-47246019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
295-463
               

               
Cow position:
               
chr6:8325870-8326037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
104, 71
               

               
Conread position:
               
295-463
               

               
Cow position:
               
chr6:58697558-58697390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
295-463
               

               
Cow position:
               
chr6:66058634-66058470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
295-472
               

               
Cow position:
               
chr6:14263817-14263641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
295-473
               

               
Cow position:
               
chr6:19052690-19052868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
295-474
               

               
Cow position:
               
chr6:43607180-43606991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
295-475
               

               
Cow position:
               
chr6:5445741-5445919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
295-479
               

               
Cow position:
               
chr6:10324817-10324632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
295-479
               

               
Cow position:
               
chr6:10605715-10605898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
143, 171
               

               
Conread position:
               
295-479
               

               
Cow position:
               
chr6:44123403-44123575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
295-480
               

               
Cow position:
               
chr6:14150306-14150127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
295-480
               

               
Cow position:
               
chr6:18440404-18440224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
295-480
               

               
Cow position:
               
chr6:21184149-21183969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
295-480
               

               
Cow position:
               
chr6:43906610-43906425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
295-480
               

               
Cow position:
               
chr6:52190873-52190695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
295-480
               

               
Cow position:
               
chr6:53267340-53267525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
159, 122
               

               
Conread position:
               
295-480
               

               
Cow position:
               
chr6:58200191-58200374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
296-455
               

               
Cow position:
               
chr6:63182363-63182516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
296-457
               

               
Cow position:
               
chr6:8726752-8726910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
296-463
               

               
Cow position:
               
chr6:4323404-4323561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
296-463
               

               
Cow position:
               
chr6:14383750-14383915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
296-463
               

               
Cow position:
               
chr6:34569482-34569655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
94, 65
               

               
Conread position:
               
296-463
               

               
Cow position:
               
chr6:35342105-35341948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
296-463
               

               
Cow position:
               
chr6:35743053-35743219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 113
               

               
Conread position:
               
296-463
               

               
Cow position:
               
chr6:44540882-44541043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
296-464
               

               
Cow position:
               
chr6:36938942-36939114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
296-467
               

               
Cow position:
               
chr6:15058451-15058617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
296-468
               

               
Cow position:
               
chr6:21083466-21083297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 100
               

               
Conread position:
               
296-468
               

               
Cow position:
               
chr6:34423384-34423216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
296-477
               

               
Cow position:
               
chr6:37994283-37994457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
296-477
               

               
Cow position:
               
chr6:60186588-60186398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
296-478
               

               
Cow position:
               
chr6:16411685-16411865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
296-478
               

               
Cow position:
               
chr6:62224496-62224673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
75, 114
               

               
Conread position:
               
296-479
               

               
Cow position:
               
chr6:30983594-30983770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
88, 47
               

               
Conread position:
               
296-479
               

               
Cow position:
               
chr6:48584444-48584258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
296-479
               

               
Cow position:
               
chr6:54679602-54679787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
296-480
               

               
Cow position:
               
chr6:23046481-23046292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
296-480
               

               
Cow position:
               
chr6:41657342-41657521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
296-480
               

               
Cow position:
               
chr6:55044567-55044386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
297-451
               

               
Cow position:
               
chr6:47450846-47450692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
70, 64
               

               
Conread position:
               
297-459
               

               
Cow position:
               
chr6:60347552-60347390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
297-463
               

               
Cow position:
               
chr6:16357512-16357680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
79, 65
               

               
Conread position:
               
297-463
               

               
Cow position:
               
chr6:19722682-19722847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
297-463
               

               
Cow position:
               
chr6:53765815-53765654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
297-463
               

               
Cow position:
               
chr6:59687737-59687571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
297-463
               

               
Cow position:
               
chr6:68246758-68246592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
297-466
               

               
Cow position:
               
chr6:50451915-50452088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
297-466
               

               
Cow position:
               
chr6:57072498-57072665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
297-466
               

               
Cow position:
               
chr6:66329627-66329461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 64
               

               
Conread position:
               
297-468
               

               
Cow position:
               
chr6:39414898-39415068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
17, 66
               

               
Conread position:
               
297-468
               

               
Cow position:
               
chr6:55919859-55919688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
297-474
               

               
Cow position:
               
chr6:34463512-34463340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
153, 86
               

               
Conread position:
               
297-478
               

               
Cow position:
               
chr6:633177-632989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
297-478
               

               
Cow position:
               
chr6:57167478-57167297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
85, 71
               

               
Conread position:
               
297-479
               

               
Cow position:
               
chr6:47790724-47790544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
297-480
               

               
Cow position:
               
chr6:16502970-16502787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 164
               

               
Conread position:
               
298-451
               

               
Cow position:
               
chr6:2757861-2758009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 64
               

               
Conread position:
               
298-459
               

               
Cow position:
               
chr6:21350956-21350796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
298-463
               

               
Cow position:
               
chr6:48278812-48278656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
300-454
               

               
Cow position:
               
chr6:46161128-46160973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
300-466
               

               
Cow position:
               
chr6:45980108-45979941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 61
               

               
Conread position:
               
300-468
               

               
Cow position:
               
chr6:67633481-67633316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
300-475
               

               
Cow position:
               
chr6:45471511-45471334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
67, 61
               

               
Conread position:
               
300-479
               

               
Cow position:
               
chr6:24651903-24651727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
300-480
               

               
Cow position:
               
chr6:67543979-67543799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
300-480
               

               
Cow position:
               
chr6:69374754-69374574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
170, 36
               

               
Conread position:
               
301-451
               

               
Cow position:
               
chr6:14471442-14471592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
301-451
               

               
Cow position:
               
chr6:34380735-34380589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
301-460
               

               
Cow position:
               
chr6:10163745-10163910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
301-462
               

               
Cow position:
               
chr6:32336111-32336277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
301-463
               

               
Cow position:
               
chr6:14152811-14152652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
97, 119
               

               
Conread position:
               
301-463
               

               
Cow position:
               
chr6:16387627-16387465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
301-463
               

               
Cow position:
               
chr6:16627814-16627968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
301-463
               

               
Cow position:
               
chr6:21175417-21175573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
301-463
               

               
Cow position:
               
chr6:26054825-26054661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
301-463
               

               
Cow position:
               
chr6:35171685-35171853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 24
               

               
Conread position:
               
301-463
               

               
Cow position:
               
chr6:36225188-36225349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
301-463
               

               
Cow position:
               
chr6:55060942-55061109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
301-466
               

               
Cow position:
               
chr6:34722025-34721869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
134, 24
               

               
Conread position:
               
301-468
               

               
Cow position:
               
chr6:19225304-19225148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
301-472
               

               
Cow position:
               
chr6:13097321-13097150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 60
               

               
Conread position:
               
301-473
               

               
Cow position:
               
chr6:19936490-19936319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
301-473
               

               
Cow position:
               
chr6:21052370-21052197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
301-473
               

               
Cow position:
               
chr6:24903498-24903329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
301-473
               

               
Cow position:
               
chr6:29266052-29265871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
301-473
               

               
Cow position:
               
chr6:67374597-67374427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
165, 76
               

               
Conread position:
               
301-479
               

               
Cow position:
               
chr6:8187110-8186929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
301-479
               

               
Cow position:
               
chr6:50682218-50682042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
160, 14
               

               
Conread position:
               
301-479
               

               
Cow position:
               
chr6:68594065-68594246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
301-480
               

               
Cow position:
               
chr6:16137691-16137510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
301-480
               

               
Cow position:
               
chr6:27219247-27219423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
152, 79
               

               
Conread position:
               
301-480
               

               
Cow position:
               
chr6:36163823-36164001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
301-480
               

               
Cow position:
               
chr6:49685897-49686076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
301-480
               

               
Cow position:
               
chr6:53732061-53732244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
302-463
               

               
Cow position:
               
chr6:32006374-32006217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
302-470
               

               
Cow position:
               
chr6:6996818-6996651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
158, 28
               

               
Conread position:
               
302-473
               

               
Cow position:
               
chr6:26408424-26408251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
302-473
               

               
Cow position:
               
chr6:54406719-54406556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
302-479
               

               
Cow position:
               
chr6:6547427-6547256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
159, 74
               

               
Conread position:
               
302-480
               

               
Cow position:
               
chr6:54840427-54840244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
303-463
               

               
Cow position:
               
chr6:59101240-59101080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
303-471
               

               
Cow position:
               
chr6:57305913-57306075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
159, 86
               

               
Conread position:
               
303-478
               

               
Cow position:
               
chr6:47150901-47151070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
304-462
               

               
Cow position:
               
chr6:66293567-66293721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
304-466
               

               
Cow position:
               
chr6:28562086-28561926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
304-473
               

               
Cow position:
               
chr6:45159975-45159806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
304-480
               

               
Cow position:
               
chr6:44474642-44474818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
305-463
               

               
Cow position:
               
chr6:3936866-3937026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
305-463
               

               
Cow position:
               
chr6:8640763-8640605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
306-459
               

               
Cow position:
               
chr6:60777855-60778004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
307-463
               

               
Cow position:
               
chr6:19025354-19025505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
307-480
               

               
Cow position:
               
chr6:49825010-49824837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
308-470
               

               
Cow position:
               
chr6:50445031-50444866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
309-454
               

               
Cow position:
               
chr6:29496080-29496222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
309-468
               

               
Cow position:
               
chr6:26764740-26764578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
309-468
               

               
Cow position:
               
chr6:55945876-55945712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
309-473
               

               
Cow position:
               
chr6:4049065-4048898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
309-473
               

               
Cow position:
               
chr6:12099599-12099441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
309-478
               

               
Cow position:
               
chr6:31928724-31928891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
309-479
               

               
Cow position:
               
chr6:67211837-67211673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
310-473
               

               
Cow position:
               
chr6:57935484-57935327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
310-478
               

               
Cow position:
               
chr6:35775570-35775738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
66, 145
               

               
Conread position:
               
310-478
               

               
Cow position:
               
chr6:54828234-54828064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
311-480
               

               
Cow position:
               
chr6:16016123-16016294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
151, 50
               

               
Conread position:
               
312-468
               

               
Cow position:
               
chr6:47989516-47989670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
94, 68
               

               
Conread position:
               
312-472
               

               
Cow position:
               
chr6:66302515-66302358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
108, 67
               

               
Conread position:
               
312-477
               

               
Cow position:
               
chr6:21347060-21346898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
153, 66
               

               
Conread position:
               
313-473
               

               
Cow position:
               
chr6:15111750-15111584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
314-473
               

               
Cow position:
               
chr6:17404651-17404812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 129
               

               
Conread position:
               
315-473
               

               
Cow position:
               
chr6:6117551-6117402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
315-478
               

               
Cow position:
               
chr6:57320504-57320344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
316-463
               

               
Cow position:
               
chr6:23381574-23381427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
318-477
               

               
Cow position:
               
chr6:56754594-56754433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 43
               

               
Conread position:
               
318-478
               

               
Cow position:
               
chr6:43770802-43770648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
320-461
               

               
Cow position:
               
chr6:62849024-62849158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
321-478
               

               
Cow position:
               
chr6:55196312-55196474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
322-458
               

               
Cow position:
               
chr6:61884074-61883939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
322-479
               

               
Cow position:
               
chr6:44636409-44636260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
322-480
               

               
Cow position:
               
chr6:60088376-60088221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
324-475
               

               
Cow position:
               
chr6:15256919-15256769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
147, 31
               

               
Conread position:
               
325-463
               

               
Cow position:
               
chr6:30688408-30688272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
325-473
               

               
Cow position:
               
chr6:3499018-3499165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
143, 102
               

               
Conread position:
               
325-473
               

               
Cow position:
               
chr6:57143593-57143444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
326-459
               

               
Cow position:
               
chr6:63762477-63762345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 51
               

               
Conread position:
               
326-473
               

               
Cow position:
               
chr6:31713571-31713727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
328-480
               

               
Cow position:
               
chr6:51648931-51649082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
332-466
               

               
Cow position:
               
chr6:65831471-65831605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
336-463
               

               
Cow position:
               
chr6:41147334-41147458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
338-480
               

               
Cow position:
               
chr6:30881212-30881069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
342-480
               

               
Cow position:
               
chr6:456831-456692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
114, 95
               

               
Conread position:
               
348-480
               

               
Cow position:
               
chr6:12711676-12711536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
351-466
               

               
Cow position:
               
chr6:16738742-16738857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
351-473
               

               
Cow position:
               
chr6:36267126-36267250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
351-480
               

               
Cow position:
               
chr6:51019278-51019406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
354-480
               

               
Cow position:
               
chr6:24362165-24362042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
354-480
               

               
Cow position:
               
chr6:26073095-26072968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 101
               

               
Conread position:
               
362-463
               

               
Cow position:
               
chr6:36592305-36592402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
381-480
               

               
Cow position:
               
chr6:59092622-59092720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               
Show alignments to all cow chromosomes.