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Cow genome map

           
Conread name:
           
Ss1.1-rsto212_a18.5
        

               
Conread position:
               
1-140
               

               
Cow position:
               
chr9:3532614-3532756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr9:49689232-49689084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr9:49544766-49544920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 126
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr9:37510312-37510153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 150
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr9:29338737-29338916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 163
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr9:18140000-18140187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr9:21712453-21712270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 156
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr9:26065124-26065312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr9:26310855-26310657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
10, 164
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr9:22616914-22616722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr9:35101162-35100965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 155
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr9:31662764-31662559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr9:5340927-5340722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 158
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr9:19542203-19541983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr9:9016924-9017146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr9:11102528-11102743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr9:30664484-30664713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
56, 166
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr9:33388613-33388830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
31, 105
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr9:48343896-48343672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
56, 149
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr9:5393345-5393118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
56, 163
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr9:9491084-9490862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr9:25958708-25958485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
58, 104
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr9:32812641-32812406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr9:4284975-4285212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 159
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr9:34762558-34762801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr9:44408327-44408088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 56
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr9:26391059-26390799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 26
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr9:49279746-49279494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
192, 36
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr9:49404049-49403789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 158
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr9:1997427-1997163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
37, 130
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr9:21840370-21840089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 149
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr9:20810769-20811069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr9:8868841-8869157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
31, 191
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr9:1951975-1952294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 156
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr9:4928924-4928595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
58, 40
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr9:41789569-41789244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr9:25546929-25546593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
8, 119
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr9:5510019-5509673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 161
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr9:5531897-5531545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 226
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr9:5161774-5162106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr9:1950211-1949853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr9:35375716-35375360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr9:54924920-54924553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
36, 5
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr9:31226167-31226539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
36, 106
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr9:49321657-49321305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 105
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr9:49982802-49983159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 179
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr9:46316493-46316857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 107
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr9:5319924-5319543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
36, 157
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr9:32371465-32371833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
36, 158
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr9:50076360-50075980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
58, 237
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr9:62657087-62656719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr9:5763335-5763716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 163
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr9:5218885-5219259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 106
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr9:62357236-62357616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 107
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr9:43871267-43870887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 72
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr9:61997301-61997691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
62, 210
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr9:63746099-63745727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr9:5268851-5268464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 201
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr9:26434769-26435147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
28, 121
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr9:45756652-45756273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 123
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr9:17410894-17411293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 88
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr9:8534391-8534798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr9:4646038-4646426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
56, 26
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr9:5594795-5594398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 233
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr9:39681653-39681236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
36, 273
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr9:1520434-1520846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 244
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr9:22696511-22696116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 86
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr9:62442576-62442180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
55, 87
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr9:19382617-19382218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 100
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr9:36445916-36445489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 152
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr9:53412954-53413367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 162
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr9:44467054-44467480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
27, 161
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr9:824250-823827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 92
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr9:9405760-9406200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr9:54528810-54528376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 145
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr9:31077383-31077815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 244
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr9:23388381-23388831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 162
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr9:56773374-56772905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 160
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr9:30402125-30402586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 85
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr9:29184839-29185298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 159
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr9:34957757-34958210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 160
               

               
Conread position:
               
1-453
               

               
Cow position:
               
chr9:18252632-18253080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr9:8937443-8936984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 238
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr9:52578238-52578703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 159
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr9:6933777-6934246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 178
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr9:9723588-9724044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 155
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr9:22151793-22152247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 123
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr9:33823386-33822952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
86, 115
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr9:5442284-5441845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr9:8724095-8723629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 134
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr9:26404084-26403629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 199
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr9:36490600-36491070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 106
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr9:42498124-42497662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 288
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr9:49764951-49764479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 157
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr9:22755085-22754611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr9:5226870-5227330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 238
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr9:5327546-5327092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr9:5433926-5433475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr9:8636952-8636508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
60, 79
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr9:8997851-8997387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 252
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr9:9443297-9443772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 247
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr9:13994483-13993989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 238
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr9:17395867-17396337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
36, 105
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr9:20579331-20579758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr9:26278882-26279343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 25
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr9:34697001-34697472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 237
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr9:55256255-55256719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 41
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr9:55796049-55795588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 156
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr9:32676977-32676504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 27
               

               
Conread position:
               
1-470
               

               
Cow position:
               
chr9:20848231-20847769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 165
               

               
Conread position:
               
1-472
               

               
Cow position:
               
chr9:9516476-9516927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 136
               

               
Conread position:
               
1-472
               

               
Cow position:
               
chr9:38793314-38792835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 166
               

               
Conread position:
               
1-472
               

               
Cow position:
               
chr9:42445690-42446165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr9:648070-647591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 98
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr9:31640023-31640509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 267
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr9:56032034-56032497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 141
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:7363330-7362823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 238
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:33940902-33940417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 235
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:64091984-64091517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 162
               

               
Conread position:
               
1-475
               

               
Cow position:
               
chr9:6952385-6951929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 47
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr9:44831762-44832259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 36
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr9:52407465-52406988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 242
               

               
Conread position:
               
1-478
               

               
Cow position:
               
chr9:8998650-8998170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
1-478
               

               
Cow position:
               
chr9:15805626-15806109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 170
               

               
Conread position:
               
1-478
               

               
Cow position:
               
chr9:26057157-26057614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
1-478
               

               
Cow position:
               
chr9:28773412-28772955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 106
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr9:5345543-5345025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
36, 231
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr9:7410077-7409589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 398
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr9:20406931-20406468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr9:4267698-4268193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 53
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr9:8951197-8950707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
56, 99
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr9:13205276-13205750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 146
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr9:20816136-20815680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 47
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr9:22318633-22318175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 106
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr9:48564390-48563894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 231
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr9:50976951-50977444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 163
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr9:58674036-58673563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
27, 85
               

               
Conread position:
               
2-146
               

               
Cow position:
               
chr9:48017529-48017681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
2-154
               

               
Cow position:
               
chr9:54666199-54666037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr9:20318782-20319008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 103
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr9:2718162-2718410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr9:10092099-10092378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
7, 44
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr9:54610938-54611229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
2-374
               

               
Cow position:
               
chr9:8599897-8599523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
35, 162
               

               
Conread position:
               
2-380
               

               
Cow position:
               
chr9:19714364-19713990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr9:8338324-8337933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
33, 161
               

               
Conread position:
               
2-386
               

               
Cow position:
               
chr9:40542407-40542040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
2-412
               

               
Cow position:
               
chr9:33093240-33092837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
2-425
               

               
Cow position:
               
chr9:21888463-21888037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 226
               

               
Conread position:
               
2-452
               

               
Cow position:
               
chr9:13181762-13182210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
35, 199
               

               
Conread position:
               
2-455
               

               
Cow position:
               
chr9:5836458-5835988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
24, 162
               

               
Conread position:
               
2-462
               

               
Cow position:
               
chr9:11299401-11299842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 90
               

               
Conread position:
               
2-466
               

               
Cow position:
               
chr9:47954929-47955433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
8, 309
               

               
Conread position:
               
2-471
               

               
Cow position:
               
chr9:21459863-21460331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 155
               

               
Conread position:
               
2-472
               

               
Cow position:
               
chr9:20091332-20090881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 105
               

               
Conread position:
               
2-473
               

               
Cow position:
               
chr9:6397492-6397968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 80
               

               
Conread position:
               
2-473
               

               
Cow position:
               
chr9:29825323-29824837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 147
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr9:13169377-13169846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 110
               

               
Conread position:
               
2-479
               

               
Cow position:
               
chr9:52505009-52505492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 282
               

               
Conread position:
               
2-480
               

               
Cow position:
               
chr9:22433649-22434111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
2-480
               

               
Cow position:
               
chr9:41416644-41416143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 111
               

               
Conread position:
               
3-217
               

               
Cow position:
               
chr9:20989161-20989386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
35, 215
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr9:16218350-16218594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 162
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr9:52001300-52001052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr9:60110527-60110150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr9:17740650-17741076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 160
               

               
Conread position:
               
3-450
               

               
Cow position:
               
chr9:3070130-3070574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
36, 113
               

               
Conread position:
               
3-458
               

               
Cow position:
               
chr9:10144179-10144646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 158
               

               
Conread position:
               
3-477
               

               
Cow position:
               
chr9:30477507-30477955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 34
               

               
Conread position:
               
3-479
               

               
Cow position:
               
chr9:34287083-34286610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
3-480
               

               
Cow position:
               
chr9:20318288-20318761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
4-141
               

               
Cow position:
               
chr9:36844123-36843982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 114
               

               
Conread position:
               
4-162
               

               
Cow position:
               
chr9:32306150-32306312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
59, 33
               

               
Conread position:
               
4-164
               

               
Cow position:
               
chr9:20237716-20237885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
4-167
               

               
Cow position:
               
chr9:8418084-8418260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
4-167
               

               
Cow position:
               
chr9:18008575-18008742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
33, 97
               

               
Conread position:
               
4-189
               

               
Cow position:
               
chr9:1350154-1350347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 37
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr9:50295732-50295941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 154
               

               
Conread position:
               
4-202
               

               
Cow position:
               
chr9:3379404-3379207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
4-202
               

               
Cow position:
               
chr9:12184038-12183835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 33
               

               
Conread position:
               
4-206
               

               
Cow position:
               
chr9:17785169-17785381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
34, 118
               

               
Conread position:
               
4-210
               

               
Cow position:
               
chr9:43023713-43023494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 45
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr9:3807445-3807665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
33, 189
               

               
Conread position:
               
4-215
               

               
Cow position:
               
chr9:59172086-59172313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 117
               

               
Conread position:
               
4-222
               

               
Cow position:
               
chr9:53608102-53608330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
33, 155
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr9:36623160-36623382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
32, 108
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr9:58133732-58133957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
4-229
               

               
Cow position:
               
chr9:57951038-57951266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
33, 6
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr9:5621738-5621986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 156
               

               
Conread position:
               
4-261
               

               
Cow position:
               
chr9:64516805-64517069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 184
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr9:9558260-9557986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
29, 99
               

               
Conread position:
               
4-278
               

               
Cow position:
               
chr9:34000321-34000607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
24, 240
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr9:22361306-22361017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr9:29034744-29035038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
4-299
               

               
Cow position:
               
chr9:18162863-18163165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
4-317
               

               
Cow position:
               
chr9:35533660-35533980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
53, 116
               

               
Conread position:
               
4-327
               

               
Cow position:
               
chr9:35850190-35849867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 151
               

               
Conread position:
               
4-344
               

               
Cow position:
               
chr9:35904459-35904799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
33, 115
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr9:6089389-6089030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 242
               

               
Conread position:
               
4-358
               

               
Cow position:
               
chr9:5141367-5141003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
8, 69
               

               
Conread position:
               
4-365
               

               
Cow position:
               
chr9:23430854-23431222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
4-378
               

               
Cow position:
               
chr9:38961145-38961516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
4-378
               

               
Cow position:
               
chr9:55084005-55084389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 146
               

               
Conread position:
               
4-385
               

               
Cow position:
               
chr9:38344187-38343789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 160
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr9:14796488-14796868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
54, 13
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr9:55074845-55075227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr9:10308715-10309097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 101
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr9:10666733-10667127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
59, 157
               

               
Conread position:
               
4-397
               

               
Cow position:
               
chr9:17310270-17310669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
26, 96
               

               
Conread position:
               
4-397
               

               
Cow position:
               
chr9:50080754-50081147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 222
               

               
Conread position:
               
4-398
               

               
Cow position:
               
chr9:64559597-64559990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
4-403
               

               
Cow position:
               
chr9:14961240-14960840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 153
               

               
Conread position:
               
4-410
               

               
Cow position:
               
chr9:28983472-28983057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
4-410
               

               
Cow position:
               
chr9:34310326-34309911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
34, 240
               

               
Conread position:
               
4-414
               

               
Cow position:
               
chr9:48106827-48107232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 105
               

               
Conread position:
               
4-432
               

               
Cow position:
               
chr9:20416220-20416653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 32
               

               
Conread position:
               
4-449
               

               
Cow position:
               
chr9:18215622-18216068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 26
               

               
Conread position:
               
4-449
               

               
Cow position:
               
chr9:24726386-24726824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 111
               

               
Conread position:
               
4-451
               

               
Cow position:
               
chr9:10011092-10010654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 19
               

               
Conread position:
               
4-457
               

               
Cow position:
               
chr9:32306948-32307398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 152
               

               
Conread position:
               
4-457
               

               
Cow position:
               
chr9:33218660-33219121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 157
               

               
Conread position:
               
4-458
               

               
Cow position:
               
chr9:63784633-63785074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 113
               

               
Conread position:
               
4-459
               

               
Cow position:
               
chr9:47905998-47906451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 55
               

               
Conread position:
               
4-461
               

               
Cow position:
               
chr9:34666700-34666284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
55, 84
               

               
Conread position:
               
4-462
               

               
Cow position:
               
chr9:9552379-9551919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 146
               

               
Conread position:
               
4-463
               

               
Cow position:
               
chr9:3387983-3387546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 233
               

               
Conread position:
               
4-463
               

               
Cow position:
               
chr9:9461363-9461837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 246
               

               
Conread position:
               
4-463
               

               
Cow position:
               
chr9:15215389-15215860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 245
               

               
Conread position:
               
4-463
               

               
Cow position:
               
chr9:15982786-15983245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
28, 217
               

               
Conread position:
               
4-463
               

               
Cow position:
               
chr9:21030608-21030134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 238
               

               
Conread position:
               
4-463
               

               
Cow position:
               
chr9:26344693-26345132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
60, 113
               

               
Conread position:
               
4-466
               

               
Cow position:
               
chr9:8548101-8547636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
4-466
               

               
Cow position:
               
chr9:20942320-20942792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
4-471
               

               
Cow position:
               
chr9:18381152-18380690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 171
               

               
Conread position:
               
4-471
               

               
Cow position:
               
chr9:36410060-36410529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 118
               

               
Conread position:
               
4-472
               

               
Cow position:
               
chr9:44822015-44822501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 11
               

               
Conread position:
               
4-473
               

               
Cow position:
               
chr9:16300282-16300752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
4-473
               

               
Cow position:
               
chr9:45285239-45285721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 140
               

               
Conread position:
               
4-474
               

               
Cow position:
               
chr9:31347245-31346769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 150
               

               
Conread position:
               
4-479
               

               
Cow position:
               
chr9:20321821-20322275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 100
               

               
Conread position:
               
4-479
               

               
Cow position:
               
chr9:30138417-30137936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 117
               

               
Conread position:
               
4-480
               

               
Cow position:
               
chr9:6192167-6192644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 161
               

               
Conread position:
               
4-480
               

               
Cow position:
               
chr9:9199493-9199956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 154
               

               
Conread position:
               
4-480
               

               
Cow position:
               
chr9:12428211-12428693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 190
               

               
Conread position:
               
4-480
               

               
Cow position:
               
chr9:19539389-19538914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 226
               

               
Conread position:
               
4-480
               

               
Cow position:
               
chr9:20900839-20901304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 70
               

               
Conread position:
               
4-480
               

               
Cow position:
               
chr9:33681970-33681451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
47, 83
               

               
Conread position:
               
4-480
               

               
Cow position:
               
chr9:44710113-44709644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 216
               

               
Conread position:
               
4-480
               

               
Cow position:
               
chr9:45141326-45141780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 31
               

               
Conread position:
               
5-158
               

               
Cow position:
               
chr9:32787817-32787979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr9:2398341-2398521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr9:25969637-25969446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr9:53602703-53602511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
5-198
               

               
Cow position:
               
chr9:38184187-38184394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 149
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr9:52787245-52787463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
5-229
               

               
Cow position:
               
chr9:58439491-58439723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
51, 128
               

               
Conread position:
               
5-234
               

               
Cow position:
               
chr9:1984231-1984473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
54, 126
               

               
Conread position:
               
5-279
               

               
Cow position:
               
chr9:18002658-18002942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 144
               

               
Conread position:
               
5-315
               

               
Cow position:
               
chr9:27697438-27697753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 129
               

               
Conread position:
               
5-344
               

               
Cow position:
               
chr9:1650316-1649966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
32, 224
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chr9:6880061-6879703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
27, 161
               

               
Conread position:
               
5-377
               

               
Cow position:
               
chr9:34468302-34468665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
32, 93
               

               
Conread position:
               
5-447
               

               
Cow position:
               
chr9:29006851-29006405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 131
               

               
Conread position:
               
5-454
               

               
Cow position:
               
chr9:22443321-22443784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 236
               

               
Conread position:
               
5-459
               

               
Cow position:
               
chr9:18343013-18342548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
5-459
               

               
Cow position:
               
chr9:34689321-34689771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 71
               

               
Conread position:
               
5-459
               

               
Cow position:
               
chr9:41283318-41282846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
5-463
               

               
Cow position:
               
chr9:20681115-20681572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 76
               

               
Conread position:
               
5-463
               

               
Cow position:
               
chr9:54681792-54681351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
5-477
               

               
Cow position:
               
chr9:5501140-5500679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 18
               

               
Conread position:
               
5-478
               

               
Cow position:
               
chr9:52689333-52689799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 176
               

               
Conread position:
               
5-480
               

               
Cow position:
               
chr9:53257773-53258242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 19
               

               
Conread position:
               
6-146
               

               
Cow position:
               
chr9:55262293-55262437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
6-217
               

               
Cow position:
               
chr9:42585336-42585561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
6-221
               

               
Cow position:
               
chr9:36067195-36066974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
50, 99
               

               
Conread position:
               
6-236
               

               
Cow position:
               
chr9:54997733-54997979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
6-261
               

               
Cow position:
               
chr9:60037945-60037680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 154
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr9:23028082-23027819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
6-374
               

               
Cow position:
               
chr9:4858824-4858451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
6-379
               

               
Cow position:
               
chr9:18072828-18073185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
50, 109
               

               
Conread position:
               
6-421
               

               
Cow position:
               
chr9:28948142-28947733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
27, 150
               

               
Conread position:
               
6-459
               

               
Cow position:
               
chr9:35167458-35167003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
6-459
               

               
Cow position:
               
chr9:41680024-41679596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 64
               

               
Conread position:
               
6-462
               

               
Cow position:
               
chr9:54716336-54716784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
41, 97
               

               
Conread position:
               
6-463
               

               
Cow position:
               
chr9:7866355-7865901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
6-463
               

               
Cow position:
               
chr9:17634541-17634995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
26, 149
               

               
Conread position:
               
6-463
               

               
Cow position:
               
chr9:24887485-24887035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
6-463
               

               
Cow position:
               
chr9:32238673-32238202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
33, 220
               

               
Conread position:
               
6-463
               

               
Cow position:
               
chr9:37017174-37016731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 171
               

               
Conread position:
               
6-466
               

               
Cow position:
               
chr9:61022900-61022446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
6-474
               

               
Cow position:
               
chr9:17871818-17872288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 120
               

               
Conread position:
               
6-478
               

               
Cow position:
               
chr9:59013045-59013523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 154
               

               
Conread position:
               
6-479
               

               
Cow position:
               
chr9:25964534-25965026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 223
               

               
Conread position:
               
6-479
               

               
Cow position:
               
chr9:28747232-28747705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 126
               

               
Conread position:
               
7-159
               

               
Cow position:
               
chr9:5400004-5399848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
7-215
               

               
Cow position:
               
chr9:26577571-26577783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
7-261
               

               
Cow position:
               
chr9:35305830-35306088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 103
               

               
Conread position:
               
7-314
               

               
Cow position:
               
chr9:3411057-3410758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
53, 18
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr9:11201868-11201532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 58
               

               
Conread position:
               
7-378
               

               
Cow position:
               
chr9:5246137-5245765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 83
               

               
Conread position:
               
7-384
               

               
Cow position:
               
chr9:7634557-7634177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 85
               

               
Conread position:
               
8-160
               

               
Cow position:
               
chr9:3216493-3216332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
50, 31
               

               
Conread position:
               
8-215
               

               
Cow position:
               
chr9:27052045-27052266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
30, 159
               

               
Conread position:
               
8-357
               

               
Cow position:
               
chr9:56253187-56252833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 166
               

               
Conread position:
               
8-378
               

               
Cow position:
               
chr9:4861677-4861296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
8-382
               

               
Cow position:
               
chr9:39428524-39428892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
8-388
               

               
Cow position:
               
chr9:64155568-64155949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 153
               

               
Conread position:
               
8-414
               

               
Cow position:
               
chr9:9416119-9416517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
30, 96
               

               
Conread position:
               
8-463
               

               
Cow position:
               
chr9:10118375-10118836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
35, 152
               

               
Conread position:
               
9-352
               

               
Cow position:
               
chr9:9823232-9823568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
30, 67
               

               
Conread position:
               
9-397
               

               
Cow position:
               
chr9:8288904-8288511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
9-463
               

               
Cow position:
               
chr9:13670924-13670466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 155
               

               
Conread position:
               
9-463
               

               
Cow position:
               
chr9:56453619-56453176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 6
               

               
Conread position:
               
9-474
               

               
Cow position:
               
chr9:14974639-14975111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 132
               

               
Conread position:
               
9-480
               

               
Cow position:
               
chr9:4630389-4629925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
23, 152
               

               
Conread position:
               
10-277
               

               
Cow position:
               
chr9:1084570-1084846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 218
               

               
Conread position:
               
10-277
               

               
Cow position:
               
chr9:36999775-37000047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
27, 167
               

               
Conread position:
               
10-337
               

               
Cow position:
               
chr9:59794994-59795335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
23, 221
               

               
Conread position:
               
10-418
               

               
Cow position:
               
chr9:11319358-11319763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
11-348
               

               
Cow position:
               
chr9:29191625-29191289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
11-414
               

               
Cow position:
               
chr9:51205006-51204600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
11-457
               

               
Cow position:
               
chr9:28726441-28726893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 94
               

               
Conread position:
               
11-480
               

               
Cow position:
               
chr9:31626434-31625945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 137
               

               
Conread position:
               
12-222
               

               
Cow position:
               
chr9:12356140-12355922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
12-241
               

               
Cow position:
               
chr9:61846866-61847103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
25, 96
               

               
Conread position:
               
12-312
               

               
Cow position:
               
chr9:35203168-35202854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 216
               

               
Conread position:
               
12-348
               

               
Cow position:
               
chr9:24997232-24997575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
20, 149
               

               
Conread position:
               
12-358
               

               
Cow position:
               
chr9:29808749-29808386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 220
               

               
Conread position:
               
12-362
               

               
Cow position:
               
chr9:44914812-44915169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
47, 92
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr9:37098950-37099326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 100
               

               
Conread position:
               
12-403
               

               
Cow position:
               
chr9:54437536-54437150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
47, 70
               

               
Conread position:
               
12-455
               

               
Cow position:
               
chr9:61739200-61738759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 166
               

               
Conread position:
               
13-459
               

               
Cow position:
               
chr9:26086350-26085891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 227
               

               
Conread position:
               
14-260
               

               
Cow position:
               
chr9:10877584-10877845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
14-377
               

               
Cow position:
               
chr9:29684427-29684058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
15-286
               

               
Cow position:
               
chr9:1712207-1712469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
15-291
               

               
Cow position:
               
chr9:5532233-5531944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
43, 230
               

               
Conread position:
               
15-379
               

               
Cow position:
               
chr9:47472977-47472595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
17, 287
               

               
Conread position:
               
15-394
               

               
Cow position:
               
chr9:37069288-37069664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
17, 209
               

               
Conread position:
               
15-457
               

               
Cow position:
               
chr9:5756722-5757141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
17, 141
               

               
Conread position:
               
15-463
               

               
Cow position:
               
chr9:1751616-1751159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 142
               

               
Conread position:
               
15-478
               

               
Cow position:
               
chr9:51566207-51566683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
16-222
               

               
Cow position:
               
chr9:27076971-27077180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 92
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr9:55287611-55288045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 150
               

               
Conread position:
               
16-454
               

               
Cow position:
               
chr9:9753117-9753563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 24
               

               
Conread position:
               
17-291
               

               
Cow position:
               
chr9:30749306-30749587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
20, 208
               

               
Conread position:
               
18-361
               

               
Cow position:
               
chr9:8963853-8963509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
18-458
               

               
Cow position:
               
chr9:19637361-19637784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 138
               

               
Conread position:
               
18-463
               

               
Cow position:
               
chr9:34374652-34375097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 145
               

               
Conread position:
               
18-478
               

               
Cow position:
               
chr9:9402907-9403356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
19-479
               

               
Cow position:
               
chr9:54677499-54677070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
20-242
               

               
Cow position:
               
chr9:42998195-42998422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 217
               

               
Conread position:
               
20-252
               

               
Cow position:
               
chr9:16745953-16745707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
17, 136
               

               
Conread position:
               
20-458
               

               
Cow position:
               
chr9:43623527-43623100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
20-479
               

               
Cow position:
               
chr9:48118427-48118865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
21-284
               

               
Cow position:
               
chr9:40105751-40105474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 212
               

               
Conread position:
               
21-452
               

               
Cow position:
               
chr9:52484642-52485071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 176
               

               
Conread position:
               
21-480
               

               
Cow position:
               
chr9:34901842-34902287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
22-378
               

               
Cow position:
               
chr9:32732411-32732767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
23-463
               

               
Cow position:
               
chr9:51620708-51620274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 113
               

               
Conread position:
               
24-372
               

               
Cow position:
               
chr9:23043047-23042696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 54
               

               
Conread position:
               
24-397
               

               
Cow position:
               
chr9:63194878-63194499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 6
               

               
Conread position:
               
24-459
               

               
Cow position:
               
chr9:55118350-55117916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
12, 131
               

               
Conread position:
               
24-477
               

               
Cow position:
               
chr9:47869278-47868841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 133
               

               
Conread position:
               
25-203
               

               
Cow position:
               
chr9:37141497-37141315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 22
               

               
Conread position:
               
25-471
               

               
Cow position:
               
chr9:22638370-22637921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 84
               

               
Conread position:
               
25-471
               

               
Cow position:
               
chr9:33598251-33597795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 200
               

               
Conread position:
               
26-222
               

               
Cow position:
               
chr9:16182221-16182423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 129
               

               
Conread position:
               
26-236
               

               
Cow position:
               
chr9:41995983-41995760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
27-284
               

               
Cow position:
               
chr9:34918997-34919253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 107
               

               
Conread position:
               
28-318
               

               
Cow position:
               
chr9:6225185-6225482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 208
               

               
Conread position:
               
28-459
               

               
Cow position:
               
chr9:9595685-9596116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 136
               

               
Conread position:
               
28-463
               

               
Cow position:
               
chr9:63905337-63905785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
31, 200
               

               
Conread position:
               
29-248
               

               
Cow position:
               
chr9:41653056-41652829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 133
               

               
Conread position:
               
29-319
               

               
Cow position:
               
chr9:36827391-36827106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
31-213
               

               
Cow position:
               
chr9:29108801-29108611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 128
               

               
Conread position:
               
31-337
               

               
Cow position:
               
chr9:11192904-11193223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 196
               

               
Conread position:
               
31-382
               

               
Cow position:
               
chr9:64050291-64050653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 190
               

               
Conread position:
               
31-449
               

               
Cow position:
               
chr9:8546582-8546185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
28, 126
               

               
Conread position:
               
31-479
               

               
Cow position:
               
chr9:43207115-43207564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
33-449
               

               
Cow position:
               
chr9:38846087-38846497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
23, 122
               

               
Conread position:
               
35-216
               

               
Cow position:
               
chr9:38875314-38875506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
36-308
               

               
Cow position:
               
chr9:50702857-50703129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
24, 113
               

               
Conread position:
               
37-463
               

               
Cow position:
               
chr9:58979659-58979234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 116
               

               
Conread position:
               
38-394
               

               
Cow position:
               
chr9:3782620-3782266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 181
               

               
Conread position:
               
40-392
               

               
Cow position:
               
chr9:15225042-15225398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
42-261
               

               
Cow position:
               
chr9:32711180-32710959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 7
               

               
Conread position:
               
42-391
               

               
Cow position:
               
chr9:38614713-38615063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
38, 32
               

               
Conread position:
               
55-229
               

               
Cow position:
               
chr9:51891724-51891545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
57-276
               

               
Cow position:
               
chr9:40604182-40603960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 167
               

               
Conread position:
               
57-393
               

               
Cow position:
               
chr9:50139513-50139182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 43
               

               
Conread position:
               
57-394
               

               
Cow position:
               
chr9:766918-767252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
30, 97
               

               
Conread position:
               
57-397
               

               
Cow position:
               
chr9:31814146-31814493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
57-450
               

               
Cow position:
               
chr9:3186374-3185972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 180
               

               
Conread position:
               
57-458
               

               
Cow position:
               
chr9:8563073-8562638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
31, 90
               

               
Conread position:
               
57-480
               

               
Cow position:
               
chr9:52619884-52619460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
30, 130
               

               
Conread position:
               
59-473
               

               
Cow position:
               
chr9:35027943-35028347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 25
               

               
Conread position:
               
60-275
               

               
Cow position:
               
chr9:33038229-33038448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 93
               

               
Conread position:
               
60-277
               

               
Cow position:
               
chr9:50667653-50667435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
24, 171
               

               
Conread position:
               
60-438
               

               
Cow position:
               
chr9:33119653-33120036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 98
               

               
Conread position:
               
60-459
               

               
Cow position:
               
chr9:49710073-49709674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 135
               

               
Conread position:
               
60-462
               

               
Cow position:
               
chr9:35128723-35128307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
60-463
               

               
Cow position:
               
chr9:56087838-56088248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
27, 176
               

               
Conread position:
               
60-463
               

               
Cow position:
               
chr9:62724775-62724372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
24, 51
               

               
Conread position:
               
60-473
               

               
Cow position:
               
chr9:61544878-61544484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
60-477
               

               
Cow position:
               
chr9:56011726-56011329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 130
               

               
Conread position:
               
60-478
               

               
Cow position:
               
chr9:6339031-6338609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 118
               

               
Conread position:
               
60-479
               

               
Cow position:
               
chr9:40302896-40303323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 161
               

               
Conread position:
               
61-373
               

               
Cow position:
               
chr9:388787-389100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
61-463
               

               
Cow position:
               
chr9:9573563-9573150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 176
               

               
Conread position:
               
61-472
               

               
Cow position:
               
chr9:1614948-1614527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 117
               

               
Conread position:
               
61-474
               

               
Cow position:
               
chr9:25805060-25804645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 14
               

               
Conread position:
               
62-345
               

               
Cow position:
               
chr9:34911387-34911098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
46, 19
               

               
Conread position:
               
62-346
               

               
Cow position:
               
chr9:1916514-1916232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 168
               

               
Conread position:
               
62-471
               

               
Cow position:
               
chr9:1729449-1729865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 50
               

               
Conread position:
               
62-478
               

               
Cow position:
               
chr9:53762928-53762511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 96
               

               
Conread position:
               
65-222
               

               
Cow position:
               
chr9:51011315-51011481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 112
               

               
Conread position:
               
65-463
               

               
Cow position:
               
chr9:1938350-1937933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
66-461
               

               
Cow position:
               
chr9:17799853-17799467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
67-276
               

               
Cow position:
               
chr9:6117925-6118134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 127
               

               
Conread position:
               
67-374
               

               
Cow position:
               
chr9:30652488-30652793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
20, 8
               

               
Conread position:
               
68-389
               

               
Cow position:
               
chr9:28354739-28354418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
68-397
               

               
Cow position:
               
chr9:1973163-1972841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 162
               

               
Conread position:
               
68-459
               

               
Cow position:
               
chr9:48628251-48627857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
68-459
               

               
Cow position:
               
chr9:64106128-64105737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
19, 86
               

               
Conread position:
               
68-463
               

               
Cow position:
               
chr9:29092025-29091600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
19, 175
               

               
Conread position:
               
68-463
               

               
Cow position:
               
chr9:61303222-61302833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 7
               

               
Conread position:
               
68-480
               

               
Cow position:
               
chr9:43048405-43048803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
20, 150
               

               
Conread position:
               
69-276
               

               
Cow position:
               
chr9:1879596-1879395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 125
               

               
Conread position:
               
69-397
               

               
Cow position:
               
chr9:18216880-18217206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
69-429
               

               
Cow position:
               
chr9:44833745-44834101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
69-480
               

               
Cow position:
               
chr9:6840231-6839801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 93
               

               
Conread position:
               
70-394
               

               
Cow position:
               
chr9:11313288-11313614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 169
               

               
Conread position:
               
71-463
               

               
Cow position:
               
chr9:17676903-17677287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
16, 91
               

               
Conread position:
               
75-378
               

               
Cow position:
               
chr9:43444009-43443716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
75-473
               

               
Cow position:
               
chr9:11123278-11123659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
75-473
               

               
Cow position:
               
chr9:52131235-52130832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 198
               

               
Conread position:
               
77-391
               

               
Cow position:
               
chr9:37678096-37677793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 8
               

               
Conread position:
               
78-480
               

               
Cow position:
               
chr9:59053886-59053475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
9, 163
               

               
Conread position:
               
80-479
               

               
Cow position:
               
chr9:56065753-56065385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
83-463
               

               
Cow position:
               
chr9:40543117-40543488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
83-473
               

               
Cow position:
               
chr9:46981031-46981402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
60, 71
               

               
Conread position:
               
84-217
               

               
Cow position:
               
chr9:8525040-8524905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
108, 66
               

               
Conread position:
               
84-397
               

               
Cow position:
               
chr9:31638436-31638764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
84-397
               

               
Cow position:
               
chr9:50543216-50543534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
30, 58
               

               
Conread position:
               
86-274
               

               
Cow position:
               
chr9:14358364-14358180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
108, 129
               

               
Conread position:
               
86-468
               

               
Cow position:
               
chr9:53138929-53139310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 136
               

               
Conread position:
               
86-472
               

               
Cow position:
               
chr9:8920200-8919825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 163
               

               
Conread position:
               
87-454
               

               
Cow position:
               
chr9:9815619-9815252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 121
               

               
Conread position:
               
87-463
               

               
Cow position:
               
chr9:4340969-4341326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
84, 66
               

               
Conread position:
               
87-466
               

               
Cow position:
               
chr9:58447922-58448299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
180, 101
               

               
Conread position:
               
88-260
               

               
Cow position:
               
chr9:58734570-58734393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
88-365
               

               
Cow position:
               
chr9:19493263-19493541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
105, 65
               

               
Conread position:
               
88-391
               

               
Cow position:
               
chr9:3738022-3738325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
107, 65
               

               
Conread position:
               
88-463
               

               
Cow position:
               
chr9:27279514-27279136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 139
               

               
Conread position:
               
88-473
               

               
Cow position:
               
chr9:47500007-47500380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
63, 147
               

               
Conread position:
               
88-475
               

               
Cow position:
               
chr9:52637960-52638353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
88-480
               

               
Cow position:
               
chr9:10650105-10650478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
88-480
               

               
Cow position:
               
chr9:16811463-16811848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
88-480
               

               
Cow position:
               
chr9:42062312-42061906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 149
               

               
Conread position:
               
90-392
               

               
Cow position:
               
chr9:62668450-62668148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
52, 84
               

               
Conread position:
               
90-474
               

               
Cow position:
               
chr9:58614687-58614316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
44, 129
               

               
Conread position:
               
90-480
               

               
Cow position:
               
chr9:4512685-4512290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
103, 59
               

               
Conread position:
               
93-370
               

               
Cow position:
               
chr9:49417182-49416907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
101, 132
               

               
Conread position:
               
93-457
               

               
Cow position:
               
chr9:12225788-12226149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 6
               

               
Conread position:
               
94-459
               

               
Cow position:
               
chr9:51720709-51721053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
98, 5
               

               
Conread position:
               
96-440
               

               
Cow position:
               
chr9:57274424-57274071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 101
               

               
Conread position:
               
96-457
               

               
Cow position:
               
chr9:30124112-30123766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 57
               

               
Conread position:
               
97-374
               

               
Cow position:
               
chr9:55321828-55321553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
156, 54
               

               
Conread position:
               
97-463
               

               
Cow position:
               
chr9:19555565-19555219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 57
               

               
Conread position:
               
97-473
               

               
Cow position:
               
chr9:25557156-25556800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
97-476
               

               
Cow position:
               
chr9:1371123-1370752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
97-479
               

               
Cow position:
               
chr9:41728446-41728074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
100-366
               

               
Cow position:
               
chr9:60027385-60027121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 51
               

               
Conread position:
               
100-431
               

               
Cow position:
               
chr9:26507313-26506976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
126, 48
               

               
Conread position:
               
100-454
               

               
Cow position:
               
chr9:62151289-62150950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
100-463
               

               
Cow position:
               
chr9:11949830-11950203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
100-473
               

               
Cow position:
               
chr9:25584008-25583651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 48
               

               
Conread position:
               
101-479
               

               
Cow position:
               
chr9:19067964-19067583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 52
               

               
Conread position:
               
101-480
               

               
Cow position:
               
chr9:16121355-16120986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
89, 46
               

               
Conread position:
               
102-448
               

               
Cow position:
               
chr9:9654126-9654466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
87, 51
               

               
Conread position:
               
102-466
               

               
Cow position:
               
chr9:28451972-28452342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 49
               

               
Conread position:
               
103-480
               

               
Cow position:
               
chr9:44680444-44680795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 10
               

               
Conread position:
               
104-417
               

               
Cow position:
               
chr9:17518305-17518618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
39, 104
               

               
Conread position:
               
104-463
               

               
Cow position:
               
chr9:26440616-26440984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
47, 361
               

               
Conread position:
               
106-458
               

               
Cow position:
               
chr9:8901042-8901394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 23
               

               
Conread position:
               
107-400
               

               
Cow position:
               
chr9:3774350-3774052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 134
               

               
Conread position:
               
107-463
               

               
Cow position:
               
chr9:6340515-6340856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
107-463
               

               
Cow position:
               
chr9:49374370-49374012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
107-477
               

               
Cow position:
               
chr9:11168911-11168563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 126
               

               
Conread position:
               
108-466
               

               
Cow position:
               
chr9:47445847-47446181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
86, 104
               

               
Conread position:
               
111-480
               

               
Cow position:
               
chr9:40215420-40215060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 112
               

               
Conread position:
               
113-478
               

               
Cow position:
               
chr9:47590806-47591168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
114-463
               

               
Cow position:
               
chr9:32019157-32019497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
29, 152
               

               
Conread position:
               
116-468
               

               
Cow position:
               
chr9:60394879-60395224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
117-378
               

               
Cow position:
               
chr9:6851897-6852155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
71, 112
               

               
Conread position:
               
117-479
               

               
Cow position:
               
chr9:26477387-26477028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 68
               

               
Conread position:
               
118-457
               

               
Cow position:
               
chr9:50202739-50202390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
118-463
               

               
Cow position:
               
chr9:21547280-21547611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 29
               

               
Conread position:
               
119-457
               

               
Cow position:
               
chr9:54493293-54492974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
167, 34
               

               
Conread position:
               
119-463
               

               
Cow position:
               
chr9:31557560-31557899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
165, 82
               

               
Conread position:
               
119-472
               

               
Cow position:
               
chr9:5263669-5263325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
74, 35
               

               
Conread position:
               
119-473
               

               
Cow position:
               
chr9:5456005-5456350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
34, 100
               

               
Conread position:
               
119-479
               

               
Cow position:
               
chr9:31216257-31215891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
23, 84
               

               
Conread position:
               
120-463
               

               
Cow position:
               
chr9:12281137-12280803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
120-480
               

               
Cow position:
               
chr9:12910234-12910586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
123-459
               

               
Cow position:
               
chr9:64637707-64637386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 16
               

               
Conread position:
               
126-378
               

               
Cow position:
               
chr9:42478304-42478570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 115
               

               
Conread position:
               
126-463
               

               
Cow position:
               
chr9:63896698-63896376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
5, 27
               

               
Conread position:
               
126-477
               

               
Cow position:
               
chr9:19034502-19034166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
68, 90
               

               
Conread position:
               
127-480
               

               
Cow position:
               
chr9:11310024-11309669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
66, 86
               

               
Conread position:
               
129-451
               

               
Cow position:
               
chr9:39211766-39211453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
59, 100
               

               
Conread position:
               
129-463
               

               
Cow position:
               
chr9:11303919-11304260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
129-463
               

               
Cow position:
               
chr9:27356079-27355748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
164, 24
               

               
Conread position:
               
129-463
               

               
Cow position:
               
chr9:27358865-27358534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
164, 24
               

               
Conread position:
               
130-359
               

               
Cow position:
               
chr9:6367135-6366901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
130-391
               

               
Cow position:
               
chr9:5077563-5077806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
158, 22
               

               
Conread position:
               
130-463
               

               
Cow position:
               
chr9:9312024-9311689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
55, 108
               

               
Conread position:
               
130-478
               

               
Cow position:
               
chr9:52267599-52267947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
130-479
               

               
Cow position:
               
chr9:61457785-61457437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 101
               

               
Conread position:
               
131-473
               

               
Cow position:
               
chr9:43757694-43757364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
158, 22
               

               
Conread position:
               
132-463
               

               
Cow position:
               
chr9:33114501-33114169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
133-454
               

               
Cow position:
               
chr9:1755987-1756312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
13, 84
               

               
Conread position:
               
133-473
               

               
Cow position:
               
chr9:39011322-39011648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 20
               

               
Conread position:
               
136-463
               

               
Cow position:
               
chr9:22408897-22408587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
137-418
               

               
Cow position:
               
chr9:41394504-41394775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
138-459
               

               
Cow position:
               
chr9:7953049-7952736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
134, 15
               

               
Conread position:
               
140-473
               

               
Cow position:
               
chr9:32669801-32670128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
141-397
               

               
Cow position:
               
chr9:28686539-28686278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
44, 199
               

               
Conread position:
               
141-452
               

               
Cow position:
               
chr9:63153673-63153973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
148, 13
               

               
Conread position:
               
141-462
               

               
Cow position:
               
chr9:4262946-4263258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
52, 10
               

               
Conread position:
               
141-462
               

               
Cow position:
               
chr9:34284094-34283786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
112, 10
               

               
Conread position:
               
141-480
               

               
Cow position:
               
chr9:38624481-38624810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
141-480
               

               
Cow position:
               
chr9:48730575-48730242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
52, 40
               

               
Conread position:
               
142-394
               

               
Cow position:
               
chr9:35105645-35105894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
142-479
               

               
Cow position:
               
chr9:18426063-18425721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 166
               

               
Conread position:
               
143-374
               

               
Cow position:
               
chr9:1867594-1867367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
46, 8
               

               
Conread position:
               
143-378
               

               
Cow position:
               
chr9:62459514-62459279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 96
               

               
Conread position:
               
144-479
               

               
Cow position:
               
chr9:51717438-51717779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
123, 98
               

               
Conread position:
               
145-466
               

               
Cow position:
               
chr9:37934094-37934412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
50, 9
               

               
Conread position:
               
149-463
               

               
Cow position:
               
chr9:10905676-10905990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
150-348
               

               
Cow position:
               
chr9:41486102-41486300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
42, 65
               

               
Conread position:
               
150-377
               

               
Cow position:
               
chr9:10819694-10819915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 72
               

               
Conread position:
               
151-447
               

               
Cow position:
               
chr9:55438287-55438586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
43, 240
               

               
Conread position:
               
152-480
               

               
Cow position:
               
chr9:44396796-44396472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
153-386
               

               
Cow position:
               
chr9:6596099-6596326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 69
               

               
Conread position:
               
153-451
               

               
Cow position:
               
chr9:32853504-32853817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 294
               

               
Conread position:
               
153-463
               

               
Cow position:
               
chr9:3573605-3573294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
153-463
               

               
Cow position:
               
chr9:6189236-6189533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 73
               

               
Conread position:
               
153-463
               

               
Cow position:
               
chr9:31359736-31359434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
37, 33
               

               
Conread position:
               
153-478
               

               
Cow position:
               
chr9:40005611-40005292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
34, 75
               

               
Conread position:
               
153-480
               

               
Cow position:
               
chr9:13743797-13744121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 54
               

               
Conread position:
               
153-480
               

               
Cow position:
               
chr9:32348686-32349015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
41, 57
               

               
Conread position:
               
154-458
               

               
Cow position:
               
chr9:60081040-60080728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
154-478
               

               
Cow position:
               
chr9:28917344-28917670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
156-477
               

               
Cow position:
               
chr9:5899829-5900138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 66
               

               
Conread position:
               
157-466
               

               
Cow position:
               
chr9:34410264-34410566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
157-474
               

               
Cow position:
               
chr9:54411018-54411346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
159-463
               

               
Cow position:
               
chr9:1877878-1878168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
30, 74
               

               
Conread position:
               
161-465
               

               
Cow position:
               
chr9:29339197-29339485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
289, 66
               

               
Conread position:
               
170-479
               

               
Cow position:
               
chr9:6954132-6954437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 11
               

               
Conread position:
               
170-480
               

               
Cow position:
               
chr9:49863431-49863745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
171-463
               

               
Cow position:
               
chr9:37199242-37198957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
172-451
               

               
Cow position:
               
chr9:21080679-21080415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
172-463
               

               
Cow position:
               
chr9:33584566-33584854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
172-466
               

               
Cow position:
               
chr9:60399305-60399016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
172-478
               

               
Cow position:
               
chr9:38941315-38941619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
172-478
               

               
Cow position:
               
chr9:53109369-53109062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
173-463
               

               
Cow position:
               
chr9:45728892-45728607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
175-388
               

               
Cow position:
               
chr9:23788551-23788341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
19, 54
               

               
Conread position:
               
175-431
               

               
Cow position:
               
chr9:64064247-64064506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
175-451
               

               
Cow position:
               
chr9:38645229-38645507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
175-463
               

               
Cow position:
               
chr9:9358926-9358648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
19, 54
               

               
Conread position:
               
175-473
               

               
Cow position:
               
chr9:23955870-23956160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
175-475
               

               
Cow position:
               
chr9:50310660-50310945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
205, 44
               

               
Conread position:
               
177-463
               

               
Cow position:
               
chr9:20755644-20755929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 138
               

               
Conread position:
               
177-463
               

               
Cow position:
               
chr9:50125482-50125770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
16, 38
               

               
Conread position:
               
178-382
               

               
Cow position:
               
chr9:28379080-28378876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
182-463
               

               
Cow position:
               
chr9:21383848-21384112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
254, 38
               

               
Conread position:
               
185-473
               

               
Cow position:
               
chr9:8716665-8716966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
187-478
               

               
Cow position:
               
chr9:56262007-56262294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
6, 28
               

               
Conread position:
               
188-451
               

               
Cow position:
               
chr9:25400098-25400345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
101, 81
               

               
Conread position:
               
188-463
               

               
Cow position:
               
chr9:17840576-17840849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
101, 49
               

               
Conread position:
               
191-449
               

               
Cow position:
               
chr9:29194927-29195188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
193-476
               

               
Cow position:
               
chr9:34278962-34279242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
194-449
               

               
Cow position:
               
chr9:5469955-5469713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
106, 30
               

               
Conread position:
               
194-462
               

               
Cow position:
               
chr9:5342159-5342415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
95, 30
               

               
Conread position:
               
194-463
               

               
Cow position:
               
chr9:8834037-8834301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
198, 46
               

               
Conread position:
               
194-463
               

               
Cow position:
               
chr9:35547364-35547095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
45, 32
               

               
Conread position:
               
194-468
               

               
Cow position:
               
chr9:52754764-52755027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
194-473
               

               
Cow position:
               
chr9:28263610-28263337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
95, 19
               

               
Conread position:
               
194-477
               

               
Cow position:
               
chr9:35832523-35832798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
61, 50
               

               
Conread position:
               
194-479
               

               
Cow position:
               
chr9:8628823-8629098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
194-480
               

               
Cow position:
               
chr9:52511207-52510929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
182, 25
               

               
Conread position:
               
195-473
               

               
Cow position:
               
chr9:26102815-26102551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
58, 24
               

               
Conread position:
               
196-392
               

               
Cow position:
               
chr9:43342420-43342229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
97, 12
               

               
Conread position:
               
196-451
               

               
Cow position:
               
chr9:5163893-5164143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
93, 35
               

               
Conread position:
               
196-457
               

               
Cow position:
               
chr9:5649882-5650125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
196-463
               

               
Cow position:
               
chr9:58662329-58662073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
198-479
               

               
Cow position:
               
chr9:35844924-35845207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 16
               

               
Conread position:
               
199-447
               

               
Cow position:
               
chr9:24652499-24652245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
199-463
               

               
Cow position:
               
chr9:34024789-34024529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
104, 14
               

               
Conread position:
               
199-474
               

               
Cow position:
               
chr9:5110947-5110675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
201-457
               

               
Cow position:
               
chr9:33542142-33541887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
201-465
               

               
Cow position:
               
chr9:12398685-12398422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
83, 12
               

               
Conread position:
               
201-479
               

               
Cow position:
               
chr9:50382239-50382505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
264, 27
               

               
Conread position:
               
202-444
               

               
Cow position:
               
chr9:62007254-62007012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 45
               

               
Conread position:
               
203-451
               

               
Cow position:
               
chr9:33838227-33838466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
86, 28
               

               
Conread position:
               
204-479
               

               
Cow position:
               
chr9:7611703-7611972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
14, 109
               

               
Conread position:
               
206-478
               

               
Cow position:
               
chr9:41785292-41785033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
215-463
               

               
Cow position:
               
chr9:34768703-34768453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 201
               

               
Conread position:
               
215-478
               

               
Cow position:
               
chr9:45253841-45254114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
217-480
               

               
Cow position:
               
chr9:40507527-40507779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
221-480
               

               
Cow position:
               
chr9:23970827-23971083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
68, 7
               

               
Conread position:
               
222-478
               

               
Cow position:
               
chr9:44388925-44389181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 147
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr9:52518756-52518991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 120
               

               
Conread position:
               
225-449
               

               
Cow position:
               
chr9:62471747-62471521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
225-474
               

               
Cow position:
               
chr9:9686348-9686599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
185, 72
               

               
Conread position:
               
227-451
               

               
Cow position:
               
chr9:55529859-55529645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
228-463
               

               
Cow position:
               
chr9:8992117-8992349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
228-463
               

               
Cow position:
               
chr9:17276825-17277062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
228-463
               

               
Cow position:
               
chr9:36628180-36627952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
228-471
               

               
Cow position:
               
chr9:57131558-57131320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 51
               

               
Conread position:
               
228-480
               

               
Cow position:
               
chr9:35728971-35729220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
229-438
               

               
Cow position:
               
chr9:48451774-48451564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 132
               

               
Conread position:
               
229-451
               

               
Cow position:
               
chr9:41964673-41964890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
229-463
               

               
Cow position:
               
chr9:59997974-59998200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
230-468
               

               
Cow position:
               
chr9:45749502-45749257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 153
               

               
Conread position:
               
231-412
               

               
Cow position:
               
chr9:39758578-39758396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
231-460
               

               
Cow position:
               
chr9:7805834-7805617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
231-463
               

               
Cow position:
               
chr9:4241466-4241237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
55, 152
               

               
Conread position:
               
231-463
               

               
Cow position:
               
chr9:35188208-35188445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
22, 113
               

               
Conread position:
               
231-463
               

               
Cow position:
               
chr9:36453480-36453708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
48, 55
               

               
Conread position:
               
231-466
               

               
Cow position:
               
chr9:34344670-34344436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
62, 14
               

               
Conread position:
               
231-473
               

               
Cow position:
               
chr9:6859789-6859540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
231-478
               

               
Cow position:
               
chr9:33347430-33347666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 142
               

               
Conread position:
               
231-480
               

               
Cow position:
               
chr9:5104343-5104596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
58, 81
               

               
Conread position:
               
231-480
               

               
Cow position:
               
chr9:33411507-33411758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 206
               

               
Conread position:
               
232-447
               

               
Cow position:
               
chr9:58368938-58369147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
232-459
               

               
Cow position:
               
chr9:43159811-43159589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
232-463
               

               
Cow position:
               
chr9:3356691-3356927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
232-463
               

               
Cow position:
               
chr9:30012932-30012701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
232-463
               

               
Cow position:
               
chr9:62145121-62144881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
232-471
               

               
Cow position:
               
chr9:12681173-12680935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
232-474
               

               
Cow position:
               
chr9:39709915-39709672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 10
               

               
Conread position:
               
232-474
               

               
Cow position:
               
chr9:47214486-47214731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
57, 139
               

               
Conread position:
               
232-478
               

               
Cow position:
               
chr9:12094541-12094293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
232-480
               

               
Cow position:
               
chr9:20451569-20451816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
57, 144
               

               
Conread position:
               
232-480
               

               
Cow position:
               
chr9:28156752-28156513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 107
               

               
Conread position:
               
233-451
               

               
Cow position:
               
chr9:22289821-22289605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 31
               

               
Conread position:
               
233-463
               

               
Cow position:
               
chr9:32387926-32388155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
63, 46
               

               
Conread position:
               
233-478
               

               
Cow position:
               
chr9:22466830-22466596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 138
               

               
Conread position:
               
233-479
               

               
Cow position:
               
chr9:48017039-48016801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
60, 135
               

               
Conread position:
               
233-480
               

               
Cow position:
               
chr9:12337960-12337713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
234-443
               

               
Cow position:
               
chr9:55494929-55495139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
234-459
               

               
Cow position:
               
chr9:37139103-37138874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
234-463
               

               
Cow position:
               
chr9:13945663-13945432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
234-463
               

               
Cow position:
               
chr9:35049530-35049310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
55, 76
               

               
Conread position:
               
234-463
               

               
Cow position:
               
chr9:52763703-52763923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
55, 135
               

               
Conread position:
               
234-474
               

               
Cow position:
               
chr9:47517255-47517016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
55, 69
               

               
Conread position:
               
234-477
               

               
Cow position:
               
chr9:64629308-64629549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
218, 122
               

               
Conread position:
               
234-480
               

               
Cow position:
               
chr9:52030536-52030290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
20, 8
               

               
Conread position:
               
235-473
               

               
Cow position:
               
chr9:44758875-44759108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
236-470
               

               
Cow position:
               
chr9:16217030-16216801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
81, 32
               

               
Conread position:
               
236-473
               

               
Cow position:
               
chr9:14738304-14738072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
57, 156
               

               
Conread position:
               
237-459
               

               
Cow position:
               
chr9:7805907-7806120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
52, 144
               

               
Conread position:
               
237-480
               

               
Cow position:
               
chr9:4181495-4181734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 198
               

               
Conread position:
               
238-463
               

               
Cow position:
               
chr9:9460036-9459819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
238-480
               

               
Cow position:
               
chr9:25375683-25375920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
51, 78
               

               
Conread position:
               
239-463
               

               
Cow position:
               
chr9:59699495-59699722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 196
               

               
Conread position:
               
241-459
               

               
Cow position:
               
chr9:42687711-42687911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
241-474
               

               
Cow position:
               
chr9:44624325-44624547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 95
               

               
Conread position:
               
242-480
               

               
Cow position:
               
chr9:14882084-14882323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
179, 83
               

               
Conread position:
               
243-444
               

               
Cow position:
               
chr9:20637420-20637224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
46, 7
               

               
Conread position:
               
243-474
               

               
Cow position:
               
chr9:55354659-55354413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 120
               

               
Conread position:
               
244-480
               

               
Cow position:
               
chr9:32858584-32858830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
9, 121
               

               
Conread position:
               
247-458
               

               
Cow position:
               
chr9:49402695-49402483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
119, 43
               

               
Conread position:
               
247-459
               

               
Cow position:
               
chr9:21292362-21292573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
6, 139
               

               
Conread position:
               
248-454
               

               
Cow position:
               
chr9:54986112-54986322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
248-463
               

               
Cow position:
               
chr9:45542736-45542951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 11
               

               
Conread position:
               
250-463
               

               
Cow position:
               
chr9:32089430-32089222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
39, 179
               

               
Conread position:
               
251-449
               

               
Cow position:
               
chr9:48115719-48115527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 115
               

               
Conread position:
               
252-451
               

               
Cow position:
               
chr9:22165674-22165875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 110
               

               
Conread position:
               
252-463
               

               
Cow position:
               
chr9:16121562-16121360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
252-467
               

               
Cow position:
               
chr9:27345545-27345763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 110
               

               
Conread position:
               
252-473
               

               
Cow position:
               
chr9:34484634-34484409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 111
               

               
Conread position:
               
252-477
               

               
Cow position:
               
chr9:11098417-11098639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
252-479
               

               
Cow position:
               
chr9:39149118-39148892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
37, 142
               

               
Conread position:
               
252-479
               

               
Cow position:
               
chr9:63853249-63853021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
252-480
               

               
Cow position:
               
chr9:42586517-42586735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 125
               

               
Conread position:
               
253-451
               

               
Cow position:
               
chr9:32955647-32955852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
43, 109
               

               
Conread position:
               
253-463
               

               
Cow position:
               
chr9:8767378-8767584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 127
               

               
Conread position:
               
253-463
               

               
Cow position:
               
chr9:45445202-45444989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
36, 110
               

               
Conread position:
               
253-478
               

               
Cow position:
               
chr9:8613173-8613397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
36, 110
               

               
Conread position:
               
253-480
               

               
Cow position:
               
chr9:29984502-29984276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
36, 213
               

               
Conread position:
               
253-480
               

               
Cow position:
               
chr9:41644712-41644940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
254-453
               

               
Cow position:
               
chr9:53124126-53123926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
254-455
               

               
Cow position:
               
chr9:26558011-26557802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
254-468
               

               
Cow position:
               
chr9:48017737-48017942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
254-479
               

               
Cow position:
               
chr9:38865946-38866162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 55
               

               
Conread position:
               
255-472
               

               
Cow position:
               
chr9:12786437-12786657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
255-480
               

               
Cow position:
               
chr9:43680156-43679931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
34, 150
               

               
Conread position:
               
256-463
               

               
Cow position:
               
chr9:45484146-45483939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
258-451
               

               
Cow position:
               
chr9:7101475-7101276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
259-452
               

               
Cow position:
               
chr9:37955139-37955333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
259-463
               

               
Cow position:
               
chr9:63134423-63134219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
126, 27
               

               
Conread position:
               
260-447
               

               
Cow position:
               
chr9:44775737-44775549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
260-473
               

               
Cow position:
               
chr9:28722735-28722523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
33, 105
               

               
Conread position:
               
261-472
               

               
Cow position:
               
chr9:31344577-31344789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
263-458
               

               
Cow position:
               
chr9:34707284-34707475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
263-477
               

               
Cow position:
               
chr9:53496726-53496947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
117, 22
               

               
Conread position:
               
263-480
               

               
Cow position:
               
chr9:6447136-6446919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
26, 173
               

               
Conread position:
               
264-441
               

               
Cow position:
               
chr9:49984014-49984192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
264-463
               

               
Cow position:
               
chr9:6945253-6945048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 105
               

               
Conread position:
               
264-472
               

               
Cow position:
               
chr9:41470073-41470280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
264-473
               

               
Cow position:
               
chr9:9557713-9557502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 77
               

               
Conread position:
               
264-474
               

               
Cow position:
               
chr9:32878081-32877878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 39
               

               
Conread position:
               
265-466
               

               
Cow position:
               
chr9:40603694-40603494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
24, 116
               

               
Conread position:
               
268-459
               

               
Cow position:
               
chr9:5220785-5220982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
268-463
               

               
Cow position:
               
chr9:12773713-12773524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
268-468
               

               
Cow position:
               
chr9:19718317-19718509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
18, 109
               

               
Conread position:
               
268-480
               

               
Cow position:
               
chr9:53631901-53632113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
270-460
               

               
Cow position:
               
chr9:13993786-13993596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
19, 117
               

               
Conread position:
               
270-460
               

               
Cow position:
               
chr9:28718733-28718550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 124
               

               
Conread position:
               
270-468
               

               
Cow position:
               
chr9:34276189-34276388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
270-471
               

               
Cow position:
               
chr9:1884109-1884319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
270-478
               

               
Cow position:
               
chr9:35403604-35403396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
17, 122
               

               
Conread position:
               
270-479
               

               
Cow position:
               
chr9:36458020-36457811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
17, 196
               

               
Conread position:
               
271-480
               

               
Cow position:
               
chr9:44314684-44314894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 107
               

               
Conread position:
               
272-462
               

               
Cow position:
               
chr9:55807650-55807465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 123
               

               
Conread position:
               
272-463
               

               
Cow position:
               
chr9:40984524-40984334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
17, 117
               

               
Conread position:
               
272-474
               

               
Cow position:
               
chr9:24748695-24748495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
273-472
               

               
Cow position:
               
chr9:151886-151688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 40
               

               
Conread position:
               
273-480
               

               
Cow position:
               
chr9:58255508-58255312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
274-459
               

               
Cow position:
               
chr9:48900818-48901001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 155
               

               
Conread position:
               
277-453
               

               
Cow position:
               
chr9:14357429-14357252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
277-459
               

               
Cow position:
               
chr9:34362752-34362570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
16, 100
               

               
Conread position:
               
280-479
               

               
Cow position:
               
chr9:5186854-5187049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
184, 84
               

               
Conread position:
               
281-459
               

               
Cow position:
               
chr9:5772672-5772846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
282-473
               

               
Cow position:
               
chr9:1984469-1984664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
283-479
               

               
Cow position:
               
chr9:18817703-18817900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 83
               

               
Conread position:
               
287-461
               

               
Cow position:
               
chr9:61909391-61909216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
287-473
               

               
Cow position:
               
chr9:8468060-8467879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
289-473
               

               
Cow position:
               
chr9:27307881-27308061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
162, 65
               

               
Conread position:
               
295-460
               

               
Cow position:
               
chr9:20237973-20238138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
295-461
               

               
Cow position:
               
chr9:17769313-17769153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
295-463
               

               
Cow position:
               
chr9:5068836-5068667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
295-465
               

               
Cow position:
               
chr9:21780919-21780751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
295-470
               

               
Cow position:
               
chr9:11447813-11447984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
295-472
               

               
Cow position:
               
chr9:27686580-27686404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 69
               

               
Conread position:
               
295-473
               

               
Cow position:
               
chr9:33127859-33128032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
295-473
               

               
Cow position:
               
chr9:35466527-35466709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
295-478
               

               
Cow position:
               
chr9:40221191-40221367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
295-480
               

               
Cow position:
               
chr9:8645261-8645081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
295-480
               

               
Cow position:
               
chr9:9392872-9392684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
295-480
               

               
Cow position:
               
chr9:17027192-17027011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 97
               

               
Conread position:
               
295-480
               

               
Cow position:
               
chr9:31694037-31694224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
295-480
               

               
Cow position:
               
chr9:33992691-33992506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
71, 46
               

               
Conread position:
               
295-480
               

               
Cow position:
               
chr9:34760369-34760551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
295-480
               

               
Cow position:
               
chr9:39061606-39061424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
295-480
               

               
Cow position:
               
chr9:54086020-54086197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
295-480
               

               
Cow position:
               
chr9:55173643-55173828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
181, 51
               

               
Conread position:
               
296-449
               

               
Cow position:
               
chr9:18163361-18163513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
296-451
               

               
Cow position:
               
chr9:11209451-11209611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
296-451
               

               
Cow position:
               
chr9:52998386-52998536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
296-456
               

               
Cow position:
               
chr9:3847396-3847232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
296-457
               

               
Cow position:
               
chr9:20712830-20712674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
296-459
               

               
Cow position:
               
chr9:24079296-24079139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
296-459
               

               
Cow position:
               
chr9:36634501-36634338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
296-460
               

               
Cow position:
               
chr9:16115614-16115772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
296-461
               

               
Cow position:
               
chr9:45740148-45740312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
296-462
               

               
Cow position:
               
chr9:8592433-8592599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
87, 93
               

               
Conread position:
               
296-462
               

               
Cow position:
               
chr9:34917191-34917346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
296-463
               

               
Cow position:
               
chr9:4256993-4257147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
296-465
               

               
Cow position:
               
chr9:2037435-2037264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
296-465
               

               
Cow position:
               
chr9:26394355-26394520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
296-468
               

               
Cow position:
               
chr9:11271361-11271518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
296-471
               

               
Cow position:
               
chr9:11873310-11873473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
296-472
               

               
Cow position:
               
chr9:62136120-62136296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
296-473
               

               
Cow position:
               
chr9:44625206-44625039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
296-473
               

               
Cow position:
               
chr9:44918286-44918459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
131, 83
               

               
Conread position:
               
296-478
               

               
Cow position:
               
chr9:20828900-20828721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
296-478
               

               
Cow position:
               
chr9:35295684-35295512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
296-478
               

               
Cow position:
               
chr9:55013338-55013525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
296-478
               

               
Cow position:
               
chr9:63708040-63707865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
296-479
               

               
Cow position:
               
chr9:31346508-31346328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
296-480
               

               
Cow position:
               
chr9:7543265-7543445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 99
               

               
Conread position:
               
296-480
               

               
Cow position:
               
chr9:8535861-8535670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
73, 141
               

               
Conread position:
               
296-480
               

               
Cow position:
               
chr9:11380652-11380835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
167, 90
               

               
Conread position:
               
296-480
               

               
Cow position:
               
chr9:26388202-26388032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
296-480
               

               
Cow position:
               
chr9:61019368-61019552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
296-480
               

               
Cow position:
               
chr9:64140565-64140751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
297-451
               

               
Cow position:
               
chr9:1712713-1712866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
297-457
               

               
Cow position:
               
chr9:12269023-12268871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
297-463
               

               
Cow position:
               
chr9:27261397-27261563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
297-463
               

               
Cow position:
               
chr9:49680107-49679940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
297-463
               

               
Cow position:
               
chr9:59897586-59897426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
297-466
               

               
Cow position:
               
chr9:2026086-2026259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 48
               

               
Conread position:
               
297-466
               

               
Cow position:
               
chr9:35209685-35209516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 73
               

               
Conread position:
               
297-468
               

               
Cow position:
               
chr9:27495230-27495056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 111
               

               
Conread position:
               
297-468
               

               
Cow position:
               
chr9:52257470-52257635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
297-470
               

               
Cow position:
               
chr9:22723590-22723760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 99
               

               
Conread position:
               
297-472
               

               
Cow position:
               
chr9:40270552-40270725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
297-473
               

               
Cow position:
               
chr9:14519387-14519554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
297-473
               

               
Cow position:
               
chr9:61286755-61286581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 74
               

               
Conread position:
               
297-476
               

               
Cow position:
               
chr9:22309190-22309014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
171, 28
               

               
Conread position:
               
297-476
               

               
Cow position:
               
chr9:34265088-34264896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
81, 140
               

               
Conread position:
               
297-476
               

               
Cow position:
               
chr9:51037270-51037086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 64
               

               
Conread position:
               
297-478
               

               
Cow position:
               
chr9:9495149-9494974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
297-478
               

               
Cow position:
               
chr9:51011800-51011986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
297-478
               

               
Cow position:
               
chr9:52153307-52153128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 65
               

               
Conread position:
               
297-479
               

               
Cow position:
               
chr9:37950904-37951089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
297-479
               

               
Cow position:
               
chr9:43352969-43352789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
297-479
               

               
Cow position:
               
chr9:58734252-58734075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
297-480
               

               
Cow position:
               
chr9:13230225-13230410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
297-480
               

               
Cow position:
               
chr9:23840401-23840591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
91, 176
               

               
Conread position:
               
297-480
               

               
Cow position:
               
chr9:32662038-32662223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
297-480
               

               
Cow position:
               
chr9:44141814-44141997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
298-459
               

               
Cow position:
               
chr9:9243543-9243378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
298-471
               

               
Cow position:
               
chr9:35932822-35932993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
164, 90
               

               
Conread position:
               
298-480
               

               
Cow position:
               
chr9:9091113-9091294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
298-480
               

               
Cow position:
               
chr9:51891238-51891065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
300-462
               

               
Cow position:
               
chr9:55892275-55892436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
300-463
               

               
Cow position:
               
chr9:6205351-6205515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
300-466
               

               
Cow position:
               
chr9:47510580-47510743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
300-477
               

               
Cow position:
               
chr9:54940436-54940609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
301-450
               

               
Cow position:
               
chr9:11199948-11200097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
301-451
               

               
Cow position:
               
chr9:28342662-28342813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
301-459
               

               
Cow position:
               
chr9:46344925-46344759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
301-460
               

               
Cow position:
               
chr9:63185706-63185864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
301-463
               

               
Cow position:
               
chr9:13141527-13141358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
301-463
               

               
Cow position:
               
chr9:13722149-13722311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
301-463
               

               
Cow position:
               
chr9:30664999-30665170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
301-463
               

               
Cow position:
               
chr9:53323795-53323957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
301-463
               

               
Cow position:
               
chr9:59586300-59586145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
301-464
               

               
Cow position:
               
chr9:17785577-17785741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
301-468
               

               
Cow position:
               
chr9:53061651-53061478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
301-468
               

               
Cow position:
               
chr9:54598662-54598498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
301-472
               

               
Cow position:
               
chr9:6929802-6929974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
301-473
               

               
Cow position:
               
chr9:34423610-34423439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
301-473
               

               
Cow position:
               
chr9:37286818-37286651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
130, 9
               

               
Conread position:
               
301-475
               

               
Cow position:
               
chr9:48367535-48367713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
301-478
               

               
Cow position:
               
chr9:24000769-24000940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
167, 9
               

               
Conread position:
               
301-478
               

               
Cow position:
               
chr9:28315418-28315238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
301-479
               

               
Cow position:
               
chr9:48046528-48046346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
301-480
               

               
Cow position:
               
chr9:8573382-8573196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 137
               

               
Conread position:
               
301-480
               

               
Cow position:
               
chr9:12355775-12355598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
94, 128
               

               
Conread position:
               
301-480
               

               
Cow position:
               
chr9:20017387-20017213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
140, 88
               

               
Conread position:
               
301-480
               

               
Cow position:
               
chr9:60741195-60741368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
103, 46
               

               
Conread position:
               
302-463
               

               
Cow position:
               
chr9:35306358-35306519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
93, 111
               

               
Conread position:
               
303-463
               

               
Cow position:
               
chr9:2397794-2397640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
304-480
               

               
Cow position:
               
chr9:19656990-19657163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
164, 66
               

               
Conread position:
               
304-480
               

               
Cow position:
               
chr9:49213386-49213210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
164, 33
               

               
Conread position:
               
305-463
               

               
Cow position:
               
chr9:6237508-6237660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
305-479
               

               
Cow position:
               
chr9:22447309-22447479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
306-468
               

               
Cow position:
               
chr9:27813204-27813045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
306-474
               

               
Cow position:
               
chr9:53390218-53390387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 127
               

               
Conread position:
               
306-480
               

               
Cow position:
               
chr9:26715239-26715067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
79, 19
               

               
Conread position:
               
306-480
               

               
Cow position:
               
chr9:54639835-54640002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
307-459
               

               
Cow position:
               
chr9:35291028-35290874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
55, 93
               

               
Conread position:
               
309-440
               

               
Cow position:
               
chr9:1841556-1841425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
309-463
               

               
Cow position:
               
chr9:19771343-19771190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
131, 67
               

               
Conread position:
               
309-463
               

               
Cow position:
               
chr9:30194992-30194841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
309-468
               

               
Cow position:
               
chr9:33034055-33033898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
309-473
               

               
Cow position:
               
chr9:22360845-22360693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
309-478
               

               
Cow position:
               
chr9:1403553-1403722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
153, 147
               

               
Conread position:
               
309-479
               

               
Cow position:
               
chr9:45711019-45711189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
309-480
               

               
Cow position:
               
chr9:10947577-10947749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
310-449
               

               
Cow position:
               
chr9:31513952-31514091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
310-472
               

               
Cow position:
               
chr9:34743021-34743179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 71
               

               
Conread position:
               
310-477
               

               
Cow position:
               
chr9:32052256-32052092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
107, 83
               

               
Conread position:
               
310-479
               

               
Cow position:
               
chr9:8537288-8537122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
310-480
               

               
Cow position:
               
chr9:50648047-50647882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
114, 73
               

               
Conread position:
               
311-480
               

               
Cow position:
               
chr9:44527097-44526924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
84, 160
               

               
Conread position:
               
312-457
               

               
Cow position:
               
chr9:4244406-4244260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
312-460
               

               
Cow position:
               
chr9:39142826-39142682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
312-463
               

               
Cow position:
               
chr9:20355845-20355699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
312-468
               

               
Cow position:
               
chr9:16826217-16826377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
312-473
               

               
Cow position:
               
chr9:51609253-51609099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
312-477
               

               
Cow position:
               
chr9:33247992-33248147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
160, 58
               

               
Conread position:
               
312-478
               

               
Cow position:
               
chr9:58440397-58440568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 105
               

               
Conread position:
               
313-470
               

               
Cow position:
               
chr9:34355800-34355955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
150, 80
               

               
Conread position:
               
313-473
               

               
Cow position:
               
chr9:47469256-47469102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
146, 48
               

               
Conread position:
               
313-480
               

               
Cow position:
               
chr9:34001015-34001181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 96
               

               
Conread position:
               
315-462
               

               
Cow position:
               
chr9:9759601-9759738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
315-468
               

               
Cow position:
               
chr9:43345713-43345560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
315-473
               

               
Cow position:
               
chr9:2945922-2945763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
315-480
               

               
Cow position:
               
chr9:45170406-45170571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
316-475
               

               
Cow position:
               
chr9:64302657-64302818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
145, 114
               

               
Conread position:
               
317-477
               

               
Cow position:
               
chr9:35905028-35905181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
317-480
               

               
Cow position:
               
chr9:20394342-20394500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
105, 66
               

               
Conread position:
               
318-473
               

               
Cow position:
               
chr9:26578230-26578389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
321-468
               

               
Cow position:
               
chr9:33389058-33389204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
322-468
               

               
Cow position:
               
chr9:6667679-6667826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
322-477
               

               
Cow position:
               
chr9:901471-901627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
140, 127
               

               
Conread position:
               
325-459
               

               
Cow position:
               
chr9:3946183-3946312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
325-463
               

               
Cow position:
               
chr9:2985036-2984898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
325-466
               

               
Cow position:
               
chr9:52651524-52651665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
325-478
               

               
Cow position:
               
chr9:12495182-12495027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
326-480
               

               
Cow position:
               
chr9:28866127-28866280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
327-480
               

               
Cow position:
               
chr9:29668574-29668420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 34
               

               
Conread position:
               
329-461
               

               
Cow position:
               
chr9:34399632-34399502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
329-462
               

               
Cow position:
               
chr9:33201085-33201217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
329-478
               

               
Cow position:
               
chr9:59172979-59173128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
330-468
               

               
Cow position:
               
chr9:34964778-34964909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
330-468
               

               
Cow position:
               
chr9:48343935-48344073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
331-480
               

               
Cow position:
               
chr9:16770960-16770800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
333-463
               

               
Cow position:
               
chr9:21816488-21816361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
334-462
               

               
Cow position:
               
chr9:11092207-11092333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
335-473
               

               
Cow position:
               
chr9:43784738-43784881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
336-478
               

               
Cow position:
               
chr9:6392791-6392651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
338-466
               

               
Cow position:
               
chr9:63711113-63710984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
339-479
               

               
Cow position:
               
chr9:5399417-5399279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 127
               

               
Conread position:
               
343-473
               

               
Cow position:
               
chr9:43876009-43876137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
123, 52
               

               
Conread position:
               
346-478
               

               
Cow position:
               
chr9:60138739-60138614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
351-463
               

               
Cow position:
               
chr9:58232382-58232494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
351-473
               

               
Cow position:
               
chr9:9582767-9582645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
351-476
               

               
Cow position:
               
chr9:39551838-39551966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 77
               

               
Conread position:
               
351-479
               

               
Cow position:
               
chr9:38370416-38370292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
352-478
               

               
Cow position:
               
chr9:1894074-1894202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
361-468
               

               
Cow position:
               
chr9:35491364-35491256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
386-472
               

               
Cow position:
               
chr9:1377074-1377163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
90
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
388-479
               

               
Cow position:
               
chr9:41486308-41486400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
391-480
               

               
Cow position:
               
chr9:41701346-41701256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               
Show alignments to all cow chromosomes.