Cow genome map

Conread name: Ss1.1-rsug01_i23.5

Conread position: 195-417
Cow position: chr18:7414827-7415051 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 23, 41

Conread position: 196-415
Cow position: chr18:23649131-23648904 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 32, 13

Conread position: 197-415
Cow position: chr18:697015-697235 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 84, 42

Conread position: 197-432
Cow position: chr18:39460421-39460184 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 44, 21

Conread position: 203-420
Cow position: chr18:24266205-24266430 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 78, 23

Conread position: 203-433
Cow position: chr18:32600255-32600015 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 204-401
Cow position: chr18:9010904-9010704 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 13

Conread position: 204-412
Cow position: chr18:30359946-30360164 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 75, 43

Conread position: 204-417
Cow position: chr18:11330423-11330199 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 12, 79

Conread position: 206-389
Cow position: chr18:51654990-51655170 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 75, 19

Conread position: 206-390
Cow position: chr18:728214-728033 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 75, 12

Conread position: 207-426
Cow position: chr18:242619-242385 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 208-419
Cow position: chr18:10051939-10051725 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 102, 12

Conread position: 209-394
Cow position: chr18:22568875-22569063 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 14, 44

Conread position: 209-394
Cow position: chr18:49017676-49017498 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 58

Conread position: 209-408
Cow position: chr18:19849573-19849768 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 107

Conread position: 209-411
Cow position: chr18:4495697-4495900 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 105, 0

Conread position: 209-417
Cow position: chr18:5078593-5078793 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 14

Conread position: 209-417
Cow position: chr18:16043956-16044171 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 65

Conread position: 210-410
Cow position: chr18:4066504-4066309 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 36

Conread position: 210-411
Cow position: chr18:55733481-55733279 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 71, 13

Conread position: 210-415
Cow position: chr18:36734368-36734581 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 211-383
Cow position: chr18:47680703-47680528 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 6, 128

Conread position: 211-383
Cow position: chr18:47865260-47865085 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 6, 128

Conread position: 211-397
Cow position: chr18:23630423-23630607 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 30, 96

Conread position: 211-399
Cow position: chr18:4264203-4264399 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 211-411
Cow position: chr18:23809930-23810134 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 99, 56

Conread position: 211-417
Cow position: chr18:52251661-52251877 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 212-383
Cow position: chr18:35171537-35171362 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 71, 29

Conread position: 212-411
Cow position: chr18:9596368-9596169 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 101

Conread position: 212-411
Cow position: chr18:23169773-23169564 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 212-416
Cow position: chr18:23615686-23615895 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 27

Conread position: 212-419
Cow position: chr18:18962620-18962403 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 212-420
Cow position: chr18:859019-858801 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 212-425
Cow position: chr18:52383096-52382876 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 70, 11

Conread position: 213-417
Cow position: chr18:51192558-51192760 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 31, 55

Conread position: 214-361
Cow position: chr18:32960267-32960114 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 66, 145

Conread position: 214-366
Cow position: chr18:26354853-26355014 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 214-403
Cow position: chr18:47458852-47459039 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 33

Conread position: 214-417
Cow position: chr18:51643179-51643385 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 128

Conread position: 215-417
Cow position: chr18:31159085-31159293 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 18, 25

Conread position: 216-379
Cow position: chr18:4857534-4857706 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 53

Conread position: 216-381
Cow position: chr18:47824591-47824757 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 26

Conread position: 216-402
Cow position: chr18:35857738-35857929 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 65, 0

Conread position: 216-411
Cow position: chr18:22328333-22328129 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 216-412
Cow position: chr18:8170904-8171100 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 28, 99

Conread position: 216-417
Cow position: chr18:11867524-11867317 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 12, 25

Conread position: 216-417
Cow position: chr18:30786916-30786720 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 65, 93

Conread position: 216-426
Cow position: chr18:14172030-14172236 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 65, 11

Conread position: 216-535
Cow position: chr18:5189508-5189836 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 65, 7

Conread position: 217-409
Cow position: chr18:46048249-46048049 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 217-417
Cow position: chr18:18918779-18918978 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 64, 11

Conread position: 217-417
Cow position: chr18:34490466-34490260 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 218-412
Cow position: chr18:2793793-2793986 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 63, 15

Conread position: 218-417
Cow position: chr18:8208240-8208445 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 65, 21

Conread position: 218-433
Cow position: chr18:16659242-16659470 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 175
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 17, 0

Conread position: 219-311
Cow position: chr18:40475995-40476088 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 219-412
Cow position: chr18:17195163-17195360 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 219-412
Cow position: chr18:50004523-50004719 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 62, 189

Conread position: 219-415
Cow position: chr18:4718442-4718241 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 62, 9

Conread position: 219-417
Cow position: chr18:7109309-7109110 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 163
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 60, 25

Conread position: 219-419
Cow position: chr18:38601704-38601907 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 62, 15

Conread position: 220-395
Cow position: chr18:49126839-49127015 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 13, 50

Conread position: 220-411
Cow position: chr18:346313-346512 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 220-415
Cow position: chr18:3180595-3180393 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 161
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 17, 0

Conread position: 220-415
Cow position: chr18:50567083-50566883 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 59, 8

Conread position: 220-417
Cow position: chr18:19641153-19640952 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 19

Conread position: 220-419
Cow position: chr18:22905771-22905980 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 95

Conread position: 220-420
Cow position: chr18:47597535-47597732 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 63

Conread position: 220-430
Cow position: chr18:18935497-18935709 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 74

Conread position: 221-374
Cow position: chr18:7487416-7487255 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 132
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 59, 0

Conread position: 221-415
Cow position: chr18:12584663-12584857 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 154
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 60, 92

Conread position: 221-415
Cow position: chr18:53092833-53093036 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 60, 38

Conread position: 221-419
Cow position: chr18:52695636-52695434 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 60, 163

Conread position: 221-481
Cow position: chr18:52459673-52459941 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 201

Conread position: 222-379
Cow position: chr18:10117916-10117758 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 222-379
Cow position: chr18:33364390-33364230 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 222-400
Cow position: chr18:11434931-11434750 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 17

Conread position: 222-400
Cow position: chr18:15613683-15613863 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 222-408
Cow position: chr18:35950225-35950024 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 222-409
Cow position: chr18:50959670-50959477 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 129

Conread position: 222-411
Cow position: chr18:14225568-14225380 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 92, 57

Conread position: 222-412
Cow position: chr18:10905025-10904835 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 19

Conread position: 222-413
Cow position: chr18:1931279-1931472 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 154
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 57, 184

Conread position: 222-414
Cow position: chr18:35453111-35452909 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 222-416
Cow position: chr18:28822582-28822771 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 78

Conread position: 222-417
Cow position: chr18:47525571-47525388 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 58, 15

Conread position: 222-419
Cow position: chr18:22120707-22120907 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 65, 29

Conread position: 222-422
Cow position: chr18:46879981-46880188 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 59, 17

Conread position: 222-426
Cow position: chr18:52691896-52691685 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 55, 143

Conread position: 222-430
Cow position: chr18:49161120-49161336 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 173
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 25, 12

Conread position: 222-479
Cow position: chr18:52684421-52684683 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 199

Conread position: 223-376
Cow position: chr18:51712539-51712696 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 31

Conread position: 223-383
Cow position: chr18:29264188-29264341 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 57, 18

Conread position: 223-390
Cow position: chr18:4485776-4485606 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 223-393
Cow position: chr18:21050907-21051079 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 22, 94

Conread position: 223-393
Cow position: chr18:36098537-36098370 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 58, 92

Conread position: 223-395
Cow position: chr18:3709410-3709232 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 57, 66

Conread position: 223-399
Cow position: chr18:47175199-47175383 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 58, 153

Conread position: 223-401
Cow position: chr18:50632263-50632446 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 22, 81

Conread position: 223-402
Cow position: chr18:22045230-22045418 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 18, 165

Conread position: 223-403
Cow position: chr18:9818940-9818762 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 57, 28

Conread position: 223-407
Cow position: chr18:21878276-21878467 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 223-408
Cow position: chr18:14201060-14201254 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 223-408
Cow position: chr18:14874735-14874541 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 223-408
Cow position: chr18:21969621-21969816 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 154
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 6, 0

Conread position: 223-409
Cow position: chr18:4000529-4000334 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 223-409
Cow position: chr18:21401118-21401313 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 223-410
Cow position: chr18:25601148-25601337 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 18

Conread position: 223-411
Cow position: chr18:7951294-7951101 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 32

Conread position: 223-411
Cow position: chr18:17390813-17391007 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 18

Conread position: 223-411
Cow position: chr18:25598053-25598246 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 223-411
Cow position: chr18:51515085-51515275 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 223-411
Cow position: chr18:53954528-53954330 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 56, 47

Conread position: 223-411
Cow position: chr18:55505582-55505393 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 20, 11

Conread position: 223-412
Cow position: chr18:641140-641338 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 58, 11

Conread position: 223-412
Cow position: chr18:6005322-6005514 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 58, 47

Conread position: 223-412
Cow position: chr18:19868079-19868275 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 60, 194

Conread position: 223-412
Cow position: chr18:21187478-21187291 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 119

Conread position: 223-412
Cow position: chr18:39114938-39115133 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 7, 37

Conread position: 223-412
Cow position: chr18:45897904-45897717 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 58, 18

Conread position: 223-412
Cow position: chr18:46276120-46276317 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 156
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 58, 0

Conread position: 223-412
Cow position: chr18:56463549-56463745 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 157
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 58, 156

Conread position: 223-413
Cow position: chr18:16382040-16381842 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 0

Conread position: 223-413
Cow position: chr18:18688929-18689115 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 91, 58

Conread position: 223-415
Cow position: chr18:381103-380914 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 41, 94

Conread position: 223-415
Cow position: chr18:10214014-10214209 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 159
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 58, 18

Conread position: 223-415
Cow position: chr18:19688208-19688006 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 223-415
Cow position: chr18:30225349-30225548 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 223-415
Cow position: chr18:33492526-33492342 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 156
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 58, 47

Conread position: 223-415
Cow position: chr18:43951007-43950808 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 57, 110

Conread position: 223-415
Cow position: chr18:46880527-46880723 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 6, 112

Conread position: 223-415
Cow position: chr18:48441965-48441770 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 16

Conread position: 223-416
Cow position: chr18:11233601-11233395 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 14, 58

Conread position: 223-416
Cow position: chr18:23714713-23714902 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 11

Conread position: 223-416
Cow position: chr18:29372049-29371848 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 58, 0

Conread position: 223-416
Cow position: chr18:39097397-39097595 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 56, 11

Conread position: 223-417
Cow position: chr18:3518434-3518248 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 128, 45

Conread position: 223-417
Cow position: chr18:7956329-7956128 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 48

Conread position: 223-417
Cow position: chr18:7963957-7963761 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 57, 47

Conread position: 223-417
Cow position: chr18:20998231-20998436 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 223-417
Cow position: chr18:32253330-32253529 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 48, 10

Conread position: 223-417
Cow position: chr18:33504084-33504277 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 37

Conread position: 223-417
Cow position: chr18:43283577-43283776 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 5, 17

Conread position: 223-417
Cow position: chr18:43796781-43796975 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 22

Conread position: 223-417
Cow position: chr18:45573559-45573360 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 159
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 58, 17

Conread position: 223-417
Cow position: chr18:47417181-47416982 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 166
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 20, 146

Conread position: 223-417
Cow position: chr18:49602862-49603063 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 223-417
Cow position: chr18:50382428-50382228 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 14

Conread position: 223-417
Cow position: chr18:51405738-51405926 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 163
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 58, 44

Conread position: 223-419
Cow position: chr18:31556980-31557182 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 163
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 59, 18

Conread position: 223-419
Cow position: chr18:55692998-55692794 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 164
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 6, 74

Conread position: 223-420
Cow position: chr18:18844186-18843994 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 11

Conread position: 223-421
Cow position: chr18:14871424-14871633 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 8, 154

Conread position: 223-422
Cow position: chr18:20480765-20480971 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 42, 16

Conread position: 223-426
Cow position: chr18:42967284-42967091 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 24, 48

Conread position: 223-439
Cow position: chr18:27079046-27078824 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 57, 178

Conread position: 223-441
Cow position: chr18:23898591-23898374 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 57, 47

Conread position: 223-519
Cow position: chr18:7965411-7965107 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 57, 147

Conread position: 224-348
Cow position: chr18:30295430-30295557 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 110
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 7, 73

Conread position: 224-397
Cow position: chr18:42431914-42432089 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 224-411
Cow position: chr18:27637670-27637478 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 158
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 57, 43

Conread position: 224-412
Cow position: chr18:1571060-1571252 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 24, 94

Conread position: 224-412
Cow position: chr18:47868771-47868593 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 56, 10

Conread position: 224-414
Cow position: chr18:20462529-20462712 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 87

Conread position: 224-417
Cow position: chr18:5632446-5632248 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 224-434
Cow position: chr18:6867319-6867523 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 44

Conread position: 225-412
Cow position: chr18:10977039-10977225 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 56, 15

Conread position: 226-393
Cow position: chr18:16313553-16313383 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 9, 0

Conread position: 226-398
Cow position: chr18:48242356-48242189 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 55, 24

Conread position: 226-404
Cow position: chr18:1399178-1399362 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 12

Conread position: 226-412
Cow position: chr18:37189116-37189309 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 226-416
Cow position: chr18:25757138-25757330 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 54, 158

Conread position: 226-417
Cow position: chr18:10322972-10322786 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 57, 84

Conread position: 226-420
Cow position: chr18:24946256-24946065 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 54, 88

Conread position: 226-420
Cow position: chr18:39662955-39662756 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 163
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 55, 15

Conread position: 227-417
Cow position: chr18:4772814-4773008 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 54, 43

Conread position: 227-425
Cow position: chr18:9846244-9846438 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 54, 92

Conread position: 228-383
Cow position: chr18:4907318-4907161 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 39

Conread position: 228-385
Cow position: chr18:20226296-20226144 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 52, 111

Conread position: 228-386
Cow position: chr18:55039778-55039628 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 39

Conread position: 228-391
Cow position: chr18:11779827-11779659 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 228-395
Cow position: chr18:36500909-36501076 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 53, 17

Conread position: 228-397
Cow position: chr18:34444565-34444736 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 53, 13

Conread position: 228-400
Cow position: chr18:18569150-18568990 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 53, 11

Conread position: 228-401
Cow position: chr18:22180607-22180774 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 53, 91

Conread position: 228-410
Cow position: chr18:5072245-5072423 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 50, 13

Conread position: 228-411
Cow position: chr18:8975566-8975382 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 55, 0

Conread position: 228-411
Cow position: chr18:19765360-19765175 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 228-412
Cow position: chr18:2144744-2144556 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 228-412
Cow position: chr18:21528822-21528632 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 53, 13

Conread position: 228-412
Cow position: chr18:29065218-29065398 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 53, 85

Conread position: 228-412
Cow position: chr18:44262800-44262614 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 86

Conread position: 228-415
Cow position: chr18:3422861-3422682 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 79

Conread position: 228-415
Cow position: chr18:5600813-5600618 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 228-415
Cow position: chr18:16736750-16736565 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 37

Conread position: 228-415
Cow position: chr18:45899069-45898874 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 228-415
Cow position: chr18:46985393-46985588 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 85

Conread position: 228-416
Cow position: chr18:32164-31973 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 53, 11

Conread position: 228-417
Cow position: chr18:3212054-3211858 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 228-417
Cow position: chr18:51675910-51676109 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 36

Conread position: 228-419
Cow position: chr18:54572112-54572314 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 228-421
Cow position: chr18:19230095-19229894 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 12

Conread position: 228-425
Cow position: chr18:50359499-50359304 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 86

Conread position: 228-433
Cow position: chr18:22789916-22790122 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 53, 196

Conread position: 228-436
Cow position: chr18:39811409-39811623 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 32, 0

Conread position: 228-440
Cow position: chr18:45186050-45185830 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 32, 210

Conread position: 229-402
Cow position: chr18:46452711-46452883 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 11

Conread position: 229-412
Cow position: chr18:12059165-12058985 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 52, 12

Conread position: 229-415
Cow position: chr18:35827205-35827391 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 38

Conread position: 229-416
Cow position: chr18:39860604-39860791 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 20, 116

Conread position: 229-417
Cow position: chr18:5766582-5766393 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 23, 91

Conread position: 229-417
Cow position: chr18:39623977-39623780 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 156
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 52, 0

Conread position: 229-426
Cow position: chr18:51757267-51757065 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 52, 140

Conread position: 230-395
Cow position: chr18:17974796-17974632 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 109

Conread position: 230-395
Cow position: chr18:44044168-44044341 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 142

Conread position: 230-407
Cow position: chr18:40028394-40028205 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 11

Conread position: 230-410
Cow position: chr18:26262039-26262226 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 146

Conread position: 230-410
Cow position: chr18:30341012-30341197 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 51, 21

Conread position: 230-412
Cow position: chr18:15173176-15172996 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 51, 37

Conread position: 230-412
Cow position: chr18:44909224-44909038 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 230-414
Cow position: chr18:19809512-19809699 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 150
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 50, 10

Conread position: 230-415
Cow position: chr18:4649723-4649544 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 12

Conread position: 230-415
Cow position: chr18:49280891-49281081 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 51, 31

Conread position: 230-416
Cow position: chr18:4851314-4851501 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 10

Conread position: 230-417
Cow position: chr18:2773213-2773412 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 230-417
Cow position: chr18:2776716-2776915 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 230-417
Cow position: chr18:19831745-19831566 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 51, 13

Conread position: 230-417
Cow position: chr18:20641329-20641516 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 51, 85

Conread position: 230-417
Cow position: chr18:21562751-21562946 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 230-417
Cow position: chr18:23380299-23380111 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 66, 98

Conread position: 230-417
Cow position: chr18:38937990-38937801 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 11

Conread position: 230-417
Cow position: chr18:44917927-44917737 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 17, 53

Conread position: 230-417
Cow position: chr18:45558314-45558127 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 51, 9

Conread position: 230-417
Cow position: chr18:45903726-45903914 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 11

Conread position: 230-417
Cow position: chr18:48407902-48407719 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 83, 11

Conread position: 230-425
Cow position: chr18:24508062-24508260 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 77, 10

Conread position: 230-425
Cow position: chr18:24719482-24719285 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 160
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 17, 86

Conread position: 231-387
Cow position: chr18:10668506-10668343 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 231-411
Cow position: chr18:28101805-28101619 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 138

Conread position: 231-412
Cow position: chr18:9066870-9066687 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 9

Conread position: 231-415
Cow position: chr18:28793909-28794089 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 48

Conread position: 231-415
Cow position: chr18:38211330-38211143 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 50, 156

Conread position: 231-416
Cow position: chr18:29188566-29188367 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 231-416
Cow position: chr18:31672348-31672531 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 50, 8

Conread position: 231-417
Cow position: chr18:11657830-11657637 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 50, 160

Conread position: 231-417
Cow position: chr18:14586308-14586490 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 50, 76

Conread position: 231-417
Cow position: chr18:32243570-32243748 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 48, 14

Conread position: 231-417
Cow position: chr18:42479411-42479606 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 50, 10

Conread position: 231-417
Cow position: chr18:47125241-47125420 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 72

Conread position: 231-417
Cow position: chr18:49970480-49970673 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 39

Conread position: 231-417
Cow position: chr18:51395723-51395905 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 50, 82

Conread position: 231-420
Cow position: chr18:37414796-37414992 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 37

Conread position: 232-417
Cow position: chr18:21751550-21751355 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 232-417
Cow position: chr18:47693224-47693046 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 75

Conread position: 232-419
Cow position: chr18:9089859-9089678 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 233-412
Cow position: chr18:47801927-47802105 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 140

Conread position: 233-415
Cow position: chr18:6454177-6454000 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 103

Conread position: 233-420
Cow position: chr18:20270842-20271042 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 157

Conread position: 233-439
Cow position: chr18:4489731-4489951 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 234-341
Cow position: chr18:18956714-18956825 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 234-367
Cow position: chr18:45897565-45897697 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 13

Conread position: 234-391
Cow position: chr18:10517275-10517108 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 30

Conread position: 234-401
Cow position: chr18:9366090-9365917 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 234-404
Cow position: chr18:49441011-49440834 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 234-409
Cow position: chr18:46048921-46048740 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 47, 6

Conread position: 234-410
Cow position: chr18:30586068-30586238 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 76

Conread position: 234-415
Cow position: chr18:35581885-35582056 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 47, 81

Conread position: 234-415
Cow position: chr18:54513285-54513098 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 6

Conread position: 234-416
Cow position: chr18:29080961-29080788 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 34

Conread position: 234-416
Cow position: chr18:42290165-42290346 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 14, 68

Conread position: 234-416
Cow position: chr18:42292893-42293074 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 14, 68

Conread position: 234-417
Cow position: chr18:1144024-1144203 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 148
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 47, 29

Conread position: 234-417
Cow position: chr18:37187826-37188017 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 234-417
Cow position: chr18:37303322-37303132 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 234-417
Cow position: chr18:55499239-55499052 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 12, 137

Conread position: 234-425
Cow position: chr18:29390043-29390223 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 163, 12

Conread position: 234-426
Cow position: chr18:135492-135683 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 47, 130

Conread position: 235-383
Cow position: chr18:35235854-35236009 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 237-409
Cow position: chr18:43014705-43014879 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 44, 0

Conread position: 238-407
Cow position: chr18:39710279-39710097 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 79

Conread position: 238-417
Cow position: chr18:7945804-7945624 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 32

Conread position: 238-433
Cow position: chr18:18961668-18961873 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 107

Conread position: 239-383
Cow position: chr18:37690314-37690164 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 239-400
Cow position: chr18:33757177-33757014 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 42, 108

Conread position: 239-410
Cow position: chr18:21782848-21782674 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 24

Conread position: 239-411
Cow position: chr18:52649176-52649361 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 239-415
Cow position: chr18:3164350-3164532 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 31

Conread position: 239-415
Cow position: chr18:4530718-4530541 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 63, 42

Conread position: 239-415
Cow position: chr18:7134444-7134258 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 239-417
Cow position: chr18:18664202-18664393 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 239-417
Cow position: chr18:29798120-29798294 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 66, 42

Conread position: 239-417
Cow position: chr18:35795057-35795242 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 99

Conread position: 239-419
Cow position: chr18:237950-238138 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 239-419
Cow position: chr18:42427779-42427598 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 42

Conread position: 239-420
Cow position: chr18:20317900-20318064 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 42, 75

Conread position: 239-422
Cow position: chr18:10576266-10576086 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 42, 75

Conread position: 239-425
Cow position: chr18:30673276-30673455 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 68, 34

Conread position: 239-441
Cow position: chr18:26873579-26873379 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 66

Conread position: 240-415
Cow position: chr18:55747851-55747668 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 11, 132

Conread position: 240-417
Cow position: chr18:36264619-36264792 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 242-401
Cow position: chr18:35534990-35535150 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 25

Conread position: 242-419
Cow position: chr18:24022775-24022596 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 152
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 242-420
Cow position: chr18:51867397-51867566 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 12

Conread position: 242-426
Cow position: chr18:40047344-40047527 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 94

Conread position: 243-426
Cow position: chr18:44548587-44548774 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 38, 162

Conread position: 244-394
Cow position: chr18:44514248-44514089 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 244-395
Cow position: chr18:47096581-47096431 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 23

Conread position: 244-407
Cow position: chr18:34389223-34389396 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 111

Conread position: 244-412
Cow position: chr18:23652955-23653133 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 52

Conread position: 244-415
Cow position: chr18:4715453-4715626 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 26

Conread position: 244-415
Cow position: chr18:56155674-56155502 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 117

Conread position: 244-416
Cow position: chr18:32992538-32992364 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 244-425
Cow position: chr18:24759501-24759684 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 150
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 37, 0

Conread position: 244-433
Cow position: chr18:53053071-53053272 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 245-357
Cow position: chr18:16856718-16856598 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 245-383
Cow position: chr18:10757900-10758041 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 245-389
Cow position: chr18:17007327-17007472 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 245-400
Cow position: chr18:35367048-35367199 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 22

Conread position: 245-401
Cow position: chr18:21143811-21143968 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 54

Conread position: 245-409
Cow position: chr18:56181301-56181467 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 141
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 8, 69

Conread position: 245-412
Cow position: chr18:28930484-28930651 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 78

Conread position: 245-412
Cow position: chr18:29648937-29648769 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 37, 98

Conread position: 245-414
Cow position: chr18:48713699-48713534 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 37, 66

Conread position: 245-416
Cow position: chr18:4556007-4556185 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 160

Conread position: 245-416
Cow position: chr18:28322810-28322635 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 90

Conread position: 245-417
Cow position: chr18:2108405-2108227 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 37, 100

Conread position: 245-417
Cow position: chr18:15809654-15809820 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 69

Conread position: 245-417
Cow position: chr18:20173980-20174149 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 42, 36

Conread position: 245-417
Cow position: chr18:41702991-41702817 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 36, 155

Conread position: 245-419
Cow position: chr18:33159100-33158920 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 245-423
Cow position: chr18:50612359-50612557 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 245-439
Cow position: chr18:9895840-9896037 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 114

Conread position: 246-387
Cow position: chr18:19143814-19143962 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 108

Conread position: 246-402
Cow position: chr18:55722656-55722496 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 246-412
Cow position: chr18:23821673-23821847 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 145
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 35, 0

Conread position: 246-417
Cow position: chr18:5647964-5647793 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 143
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 35, 68

Conread position: 246-417
Cow position: chr18:29474894-29474724 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 77

Conread position: 246-537
Cow position: chr18:247541-247832 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 36, 193

Conread position: 247-393
Cow position: chr18:41253698-41253544 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 247-411
Cow position: chr18:49038609-49038448 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 22

Conread position: 247-415
Cow position: chr18:53642595-53642766 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 125

Conread position: 247-417
Cow position: chr18:3097870-3098052 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 247-417
Cow position: chr18:12273809-12273638 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 145
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 247-419
Cow position: chr18:39168685-39168510 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 142

Conread position: 247-425
Cow position: chr18:19796762-19796951 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 248-417
Cow position: chr18:47872187-47872021 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 33, 57

Conread position: 250-383
Cow position: chr18:24718679-24718545 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 56

Conread position: 250-392
Cow position: chr18:3066487-3066349 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 31, 72

Conread position: 250-395
Cow position: chr18:38228552-38228409 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 65

Conread position: 250-401
Cow position: chr18:25006354-25006497 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 64

Conread position: 250-402
Cow position: chr18:26999041-26998880 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 250-405
Cow position: chr18:47306752-47306914 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 31, 158

Conread position: 250-408
Cow position: chr18:52590245-52590088 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 66, 32

Conread position: 250-412
Cow position: chr18:35874230-35874063 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 134
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 0

Conread position: 250-412
Cow position: chr18:48112814-48112982 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 250-416
Cow position: chr18:47486198-47486025 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 91

Conread position: 250-417
Cow position: chr18:2146440-2146599 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 49

Conread position: 250-417
Cow position: chr18:6470244-6470075 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 250-417
Cow position: chr18:18592616-18592453 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 51

Conread position: 250-426
Cow position: chr18:41639007-41639188 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 250-430
Cow position: chr18:37381939-37382128 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 31, 0

Conread position: 251-403
Cow position: chr18:47419946-47419793 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 92

Conread position: 251-409
Cow position: chr18:43125228-43125074 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 30, 80

Conread position: 251-415
Cow position: chr18:26586461-26586632 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 86

Conread position: 252-412
Cow position: chr18:38523803-38523645 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 39

Conread position: 252-420
Cow position: chr18:4757884-4758055 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 21

Conread position: 254-405
Cow position: chr18:31727497-31727656 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 132
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 27, 0

Conread position: 254-417
Cow position: chr18:50974137-50974314 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 255-403
Cow position: chr18:5462558-5462694 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 15

Conread position: 255-425
Cow position: chr18:49655828-49655657 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 25, 59

Conread position: 256-415
Cow position: chr18:23446913-23447079 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 139
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 25, 0

Conread position: 256-425
Cow position: chr18:51691317-51691490 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 9, 0

Conread position: 259-411
Cow position: chr18:21664578-21664723 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 266-411
Cow position: chr18:19158013-19157860 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 266-417
Cow position: chr18:20175058-20175214 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 104

Conread position: 266-417
Cow position: chr18:28657778-28657931 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 268-418
Cow position: chr18:44205955-44206105 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 46

Conread position: 270-417
Cow position: chr18:2774004-2774158 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 11, 77

Conread position: 270-424
Cow position: chr18:47920881-47920717 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 271-415
Cow position: chr18:11754264-11754112 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 272-410
Cow position: chr18:46647033-46647173 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 272-417
Cow position: chr18:48962069-48961914 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 273-398
Cow position: chr18:16356356-16356487 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 273-425
Cow position: chr18:911984-912131 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 8, 41

Conread position: 283-417
Cow position: chr18:51655930-51656062 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 285-417
Cow position: chr18:17005368-17005240 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 52, 21

Conread position: 294-412
Cow position: chr18:39434930-39434811 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 61

Conread position: 294-417
Cow position: chr18:27109183-27109312 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 294-421
Cow position: chr18:52589863-52589991 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 13, 99

Conread position: 298-420
Cow position: chr18:53962330-53962449 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 301-415
Cow position: chr18:47835921-47835807 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 13, 81

Conread position: 301-417
Cow position: chr18:6399542-6399652 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 301-417
Cow position: chr18:19273001-19273116 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 102
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 301-417
Cow position: chr18:19883628-19883512 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 85, 12

Conread position: 301-417
Cow position: chr18:22214585-22214468 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 301-417
Cow position: chr18:38757742-38757858 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 11

Conread position: 301-417
Cow position: chr18:46072558-46072443 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 301-417
Cow position: chr18:56159556-56159442 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 301-425
Cow position: chr18:19433857-19433735 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 301-425
Cow position: chr18:51392548-51392669 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 301-426
Cow position: chr18:21192318-21192442 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 13

Conread position: 301-475
Cow position: chr18:16997349-16997176 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 125, 11

Conread position: 302-417
Cow position: chr18:7359841-7359725 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 302-417
Cow position: chr18:19896355-19896471 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 302-417
Cow position: chr18:21266602-21266486 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 302-445
Cow position: chr18:46171857-46171999 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 79

Conread position: 302-456
Cow position: chr18:24529776-24529928 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 11, 54

Conread position: 303-417
Cow position: chr18:5701340-5701229 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 303-417
Cow position: chr18:49982823-49982710 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 304-409
Cow position: chr18:4757480-4757582 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 304-456
Cow position: chr18:4624056-4624206 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 11, 118

Conread position: 304-465
Cow position: chr18:11262928-11262769 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 312-415
Cow position: chr18:36746174-36746277 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 314-417
Cow position: chr18:52855138-52855035 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 315-410
Cow position: chr18:52625382-52625477 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 663-750
Cow position: chr18:41238238-41238153 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 79
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 0

Show alignments to all cow chromosomes.