Cow genome map
| Conread name: | Ss1.1-rsug08_f12.5 |
| Conread position: | 1-152 |
| Cow position: | chr11:50040657-50040808 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 127, 36 |
| Conread position: | 1-177 |
| Cow position: | chr11:2891881-2891709 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 138, 36 |
| Conread position: | 1-179 |
| Cow position: | chr11:12320645-12320466 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 36, 148 |
| Conread position: | 1-180 |
| Cow position: | chr11:14191403-14191228 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-181 |
| Cow position: | chr11:52785750-52785577 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-172 |
| Cow position: | chr11:85701827-85702000 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 80, 36 |
| Conread position: | 2-179 |
| Cow position: | chr11:40582385-40582208 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 46, 36 |
| Conread position: | 2-180 |
| Cow position: | chr11:35745733-35745909 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 36 |
| Conread position: | 2-180 |
| Cow position: | chr11:39867565-39867751 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 76, 153 |
| Conread position: | 2-180 |
| Cow position: | chr11:63667163-63667338 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 126, 35 |
| Conread position: | 3-143 |
| Cow position: | chr11:31815457-31815597 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 34 |
| Conread position: | 3-180 |
| Cow position: | chr11:19228343-19228521 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 29, 9 |
| Conread position: | 10-172 |
| Cow position: | chr11:65753036-65752875 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 67, 24 |
| Conread position: | 21-173 |
| Cow position: | chr11:58354918-58355069 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 46, 16 |
| Conread position: | 40-179 |
| Cow position: | chr11:70695024-70695161 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
Show alignments to all cow chromosomes.