Cow genome map


           Conread name:
           Ss1.1-rsug08_f12.5
        

               Conread position:
               1-141
               

               Cow position:
               chr27:20255119-20254981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               1-179
               

               Cow position:
               chr27:20009795-20009970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               1-179
               

               Cow position:
               chr27:31545536-31545358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               53, 127
               

               Conread position:
               1-180
               

               Cow position:
               chr27:15511853-15512029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               163, 36
               

               Conread position:
               1-181
               

               Cow position:
               chr27:8664524-8664693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1-194
               

               Cow position:
               chr27:23087155-23086971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               2-181
               

               Cow position:
               chr27:16591189-16591366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               154
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               9-176
               

               Cow position:
               chr27:23996142-23995982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               128, 5
               
Show alignments to all cow chromosomes.