Cow genome map


           Conread name:
           Ss1.1-rsug08_f12.5
        

               Conread position:
               1-179
               

               Cow position:
               chr28:10570133-10569958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               79, 37
               

               Conread position:
               1-180
               

               Cow position:
               chr28:6951876-6951705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               1-180
               

               Cow position:
               chr28:19219929-19220106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               101, 36
               

               Conread position:
               1-180
               

               Cow position:
               chr28:25581309-25581485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               127, 36
               

               Conread position:
               7-180
               

               Cow position:
               chr28:26251858-26251691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               20-170
               

               Cow position:
               chr28:5933268-5933416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               40-181
               

               Cow position:
               chr28:33064590-33064730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               107, 0
               
Show alignments to all cow chromosomes.