Cow genome map
| Conread name: | Ss1.1-rsug08_f12.5 |
| Conread position: | 1-173 |
| Cow position: | chr29:7621770-7621941 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 100, 36 |
| Conread position: | 1-173 |
| Cow position: | chr29:18444952-18445117 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 57, 30 |
| Conread position: | 1-178 |
| Cow position: | chr29:1105770-1105592 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 73, 34 |
| Conread position: | 1-180 |
| Cow position: | chr29:10625912-10625736 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 98, 33 |
| Conread position: | 1-180 |
| Cow position: | chr29:15521361-15521179 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 88, 33 |
| Conread position: | 1-180 |
| Cow position: | chr29:22690008-22689830 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 136, 36 |
| Conread position: | 1-180 |
| Cow position: | chr29:31177400-31177575 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 136, 37 |
| Conread position: | 1-180 |
| Cow position: | chr29:38262980-38262800 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 136, 36 |
| Conread position: | 2-179 |
| Cow position: | chr29:39296084-39295909 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 2-180 |
| Cow position: | chr29:1447142-1447318 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 75, 35 |
| Conread position: | 3-145 |
| Cow position: | chr29:30721982-30721838 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 3-180 |
| Cow position: | chr29:1586358-1586187 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 7-181 |
| Cow position: | chr29:13500700-13500872 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 110, 32 |
| Conread position: | 8-180 |
| Cow position: | chr29:39532361-39532191 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 103, 29 |
| Conread position: | 15-179 |
| Cow position: | chr29:27475613-27475775 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.