Cow genome map
| Conread name: | Ss1.1-rsug08_f12.5 |
| Conread position: | 1-147 |
| Cow position: | chr3:81080711-81080853 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-172 |
| Cow position: | chr3:20351818-20351651 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 76, 36 |
| Conread position: | 1-179 |
| Cow position: | chr3:11952167-11952346 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 77, 36 |
| Conread position: | 1-180 |
| Cow position: | chr3:4446244-4446419 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-180 |
| Cow position: | chr3:6559241-6559423 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 49, 36 |
| Conread position: | 1-180 |
| Cow position: | chr3:8146902-8147076 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 127, 33 |
| Conread position: | 1-180 |
| Cow position: | chr3:8708670-8708845 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-180 |
| Cow position: | chr3:23187333-23187145 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 156 |
| Conread position: | 1-180 |
| Cow position: | chr3:31110339-31110161 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 36 |
| Conread position: | 1-180 |
| Cow position: | chr3:83980924-83981099 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-181 |
| Cow position: | chr3:2308168-2307990 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 34 |
| Conread position: | 2-181 |
| Cow position: | chr3:45948823-45948647 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 3-180 |
| Cow position: | chr3:16574592-16574418 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 3-180 |
| Cow position: | chr3:23178565-23178390 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 3-180 |
| Cow position: | chr3:53211192-53211017 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 7-180 |
| Cow position: | chr3:63151801-63151974 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 76, 24 |
| Conread position: | 12-173 |
| Cow position: | chr3:48244091-48244251 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 58, 22 |
| Conread position: | 43-169 |
| Cow position: | chr3:28595695-28595819 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 92, 12 |
| Conread position: | 45-180 |
| Cow position: | chr3:53910652-53910519 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
Show alignments to all cow chromosomes.