Cow genome map
| Conread name: | Ss1.1-rsug08_f12.5 |
| Conread position: | 1-119 |
| Cow position: | chr4:4020604-4020484 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 36 |
| Conread position: | 1-121 |
| Cow position: | chr4:14947454-14947570 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-173 |
| Cow position: | chr4:26617594-26617764 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-180 |
| Cow position: | chr4:165621-165444 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 138, 36 |
| Conread position: | 1-180 |
| Cow position: | chr4:18797557-18797378 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 33 |
| Conread position: | 1-180 |
| Cow position: | chr4:43283872-43284048 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 125, 38 |
| Conread position: | 1-181 |
| Cow position: | chr4:30016837-30016664 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-180 |
| Cow position: | chr4:23613093-23613265 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 3-180 |
| Cow position: | chr4:37509759-37509587 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 34 |
| Conread position: | 3-180 |
| Cow position: | chr4:54377547-54377373 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 4-173 |
| Cow position: | chr4:66853856-66854021 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 4-180 |
| Cow position: | chr4:3901828-3902001 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 46-181 |
| Cow position: | chr4:59577458-59577324 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 49-168 |
| Cow position: | chr4:4032253-4032370 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 59-180 |
| Cow position: | chr4:37548518-37548399 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
Show alignments to all cow chromosomes.