Cow genome map
| Conread name: | Ss1.1-rsug08_f12.5 |
| Conread position: | 1-131 |
| Cow position: | chr5:49610014-49610142 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-178 |
| Cow position: | chr5:51247629-51247799 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 36 |
| Conread position: | 1-180 |
| Cow position: | chr5:2188699-2188873 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:3396600-3396423 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 154, 18 |
| Conread position: | 1-180 |
| Cow position: | chr5:41330540-41330358 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 27, 58 |
| Conread position: | 1-180 |
| Cow position: | chr5:47838005-47837827 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 78, 37 |
| Conread position: | 1-180 |
| Cow position: | chr5:75866848-75867024 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 125, 36 |
| Conread position: | 2-135 |
| Cow position: | chr5:43401197-43401067 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-171 |
| Cow position: | chr5:6390757-6390591 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 144, 31 |
| Conread position: | 17-180 |
| Cow position: | chr5:39084001-39083841 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 36-180 |
| Cow position: | chr5:42709755-42709614 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 46-180 |
| Cow position: | chr5:43087157-43087023 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 9 |
Show alignments to all cow chromosomes.