Cow genome map
| Conread name: | Ss1.1-rsug08_f12.5 |
| Conread position: | 1-179 |
| Cow position: | chrX:38739919-38740091 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 43, 34 |
| Conread position: | 1-180 |
| Cow position: | chrX:1340505-1340333 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-180 |
| Cow position: | chrX:23364306-23364128 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 81, 36 |
| Conread position: | 1-180 |
| Cow position: | chrX:31908950-31908774 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-180 |
| Cow position: | chrX:38737029-38736851 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 135, 36 |
| Conread position: | 1-180 |
| Cow position: | chrX:42549729-42549905 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 2-180 |
| Cow position: | chrX:25219123-25219299 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 2-180 |
| Cow position: | chrX:42915690-42915862 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 3-180 |
| Cow position: | chrX:29774625-29774799 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 134, 35 |
| Conread position: | 3-180 |
| Cow position: | chrX:31919147-31918975 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 4-180 |
| Cow position: | chrX:21177789-21177623 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 48, 27 |
| Conread position: | 4-180 |
| Cow position: | chrX:24630973-24631144 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 132, 27 |
| Conread position: | 10-172 |
| Cow position: | chrX:14214453-14214293 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 113, 24 |
| Conread position: | 15-121 |
| Cow position: | chrX:4547131-4547026 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
Show alignments to all cow chromosomes.