Cow genome map

Conread name: Ss1.1-rsug17_g7.5

Conread position: 1-385
Cow position:
Alignm length: 387
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 369

Conread position: 1-613
Cow position:
Alignm length: 614
Alignm identity: 344
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 251, 264

Conread position: 1-641
Cow position:
Alignm length: 646
Alignm identity: 381
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 30, 48

Conread position: 1-642
Cow position:
Alignm length: 647
Alignm identity: 378
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 37, 48

Conread position: 1-675
Cow position:
Alignm length: 677
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 122

Conread position: 1-681
Cow position:
Alignm length: 682
Alignm identity: 399
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 106, 94

Conread position: 1-682
Cow position:
Alignm length: 694
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 83

Conread position: 2-491
Cow position:
Alignm length: 493
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 9

Conread position: 2-681
Cow position:
Alignm length: 680
Alignm identity: 396
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 3-553
Cow position:
Alignm length: 552
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 470, 115

Conread position: 3-620
Cow position:
Alignm length: 626
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 207

Conread position: 3-660
Cow position:
Alignm length: 661
Alignm identity: 387
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 21, 15

Conread position: 3-660
Cow position:
Alignm length: 661
Alignm identity: 389
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 15

Conread position: 3-684
Cow position:
Alignm length: 690
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 76

Conread position: 5-686
Cow position:
Alignm length: 684
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 118

Conread position: 11-418
Cow position:
Alignm length: 410
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 97

Conread position: 12-625
Cow position:
Alignm length: 615
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 579, 589

Conread position: 12-670
Cow position:
Alignm length: 659
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 12-670
Cow position:
Alignm length: 661
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 77

Conread position: 12-678
Cow position:
Alignm length: 667
Alignm identity: 386
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 12-682
Cow position:
Alignm length: 671
Alignm identity: 390
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 14-560
Cow position:
Alignm length: 549
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 11

Conread position: 19-670
Cow position:
Alignm length: 653
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 90

Conread position: 20-681
Cow position:
Alignm length: 674
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 76

Conread position: 22-641
Cow position:
Alignm length: 630
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 160

Conread position: 23-681
Cow position:
Alignm length: 661
Alignm identity: 381
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 550, 543

Conread position: 23-696
Cow position:
Alignm length: 678
Alignm identity: 393
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 550, 543

Conread position: 35-670
Cow position:
Alignm length: 636
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 43-670
Cow position:
Alignm length: 631
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 293

Conread position: 54-501
Cow position:
Alignm length: 454
Alignm identity: 280
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 42

Conread position: 87-684
Cow position:
Alignm length: 607
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 105

Conread position: 107-693
Cow position:
Alignm length: 588
Alignm identity: 348
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 351, 358

Conread position: 107-693
Cow position:
Alignm length: 589
Alignm identity: 354
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 358, 352

Conread position: 110-659
Cow position:
Alignm length: 550
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 512, 0

Conread position: 139-661
Cow position:
Alignm length: 527
Alignm identity: 328
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 94, 75

Conread position: 140-677
Cow position:
Alignm length: 540
Alignm identity: 323
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 395, 409

Conread position: 140-677
Cow position:
Alignm length: 538
Alignm identity: 324
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 149-686
Cow position:
Alignm length: 538
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 172-542
Cow position:
Alignm length: 383
Alignm identity: 238
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 105

Conread position: 224-684
Cow position:
Alignm length: 465
Alignm identity: 280
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 34

Conread position: 261-686
Cow position:
Alignm length: 428
Alignm identity: 256
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 183, 177

Conread position: 286-669
Cow position:
Alignm length: 385
Alignm identity: 238
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 315, 305

Conread position: 349-684
Cow position:
Alignm length: 336
Alignm identity: 203
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.