Cow genome map
| Conread name: | Ss1.1-rsug17_g7.5 |
| Conread position: | 1-490 |
| Cow position: | chr17:22551969-22551480 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-681 |
| Cow position: | chr17:22552977-22552297 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 610, 606 |
| Conread position: | 1-682 |
| Cow position: | chr17:22499268-22498587 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 345, 334 |
| Conread position: | 1-682 |
| Cow position: | chr17:22552389-22551708 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-684 |
| Cow position: | chr17:22552893-22552209 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 108 |
| Conread position: | 1-694 |
| Cow position: | chr17:22552809-22552116 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 443, 438 |
| Conread position: | 2-494 |
| Cow position: | chr17:22452169-22451677 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 188 |
| Conread position: | 2-658 |
| Cow position: | chr17:22552136-22551480 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 107 |
| Conread position: | 3-677 |
| Cow position: | chr17:22553143-22552469 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-681 |
| Cow position: | chr17:22553059-22552381 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 93 |
| Conread position: | 3-683 |
| Cow position: | chr17:22552555-22551875 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 441, 436 |
| Conread position: | 4-543 |
| Cow position: | chr17:22589720-22589181 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 179 |
| Conread position: | 4-682 |
| Cow position: | chr17:22552638-22551960 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 20 |
| Conread position: | 4-686 |
| Cow position: | chr17:22589972-22589290 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 196 |
| Conread position: | 5-678 |
| Cow position: | chr17:22589803-22589135 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 421, 403 |
| Conread position: | 5-682 |
| Cow position: | chr17:22552721-22552044 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 98 |
| Conread position: | 5-682 |
| Cow position: | chr17:22590139-22589462 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 52 |
| Conread position: | 9-650 |
| Cow position: | chr17:22499092-22498460 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 78 |
| Conread position: | 9-682 |
| Cow position: | chr17:22590219-22589546 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 419, 410 |
| Conread position: | 11-323 |
| Cow position: | chr17:22473639-22473952 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 285, 0 |
| Conread position: | 11-681 |
| Cow position: | chr17:22452412-22451742 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 152 |
| Conread position: | 12-407 |
| Cow position: | chr17:22473556-22473952 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 69 |
| Conread position: | 13-647 |
| Cow position: | chr17:22499172-22498538 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 238 |
| Conread position: | 13-682 |
| Cow position: | chr17:22552209-22551540 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 96 |
| Conread position: | 20-681 |
| Cow position: | chr17:22473231-22473889 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 32 |
| Conread position: | 22-669 |
| Cow position: | chr17:22499331-22498684 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 322, 313 |
| Conread position: | 23-659 |
| Cow position: | chr17:22473315-22473952 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 78 |
| Conread position: | 23-660 |
| Cow position: | chr17:22452316-22451679 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 149 |
| Conread position: | 23-661 |
| Cow position: | chr17:22452232-22451594 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 140 |
| Conread position: | 23-676 |
| Cow position: | chr17:22590289-22589637 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 57 |
| Conread position: | 23-678 |
| Cow position: | chr17:22590037-22589383 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 487, 481 |
| Conread position: | 23-682 |
| Cow position: | chr17:22552283-22551624 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-682 |
| Cow position: | chr17:22552451-22551792 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 86 |
| Conread position: | 23-683 |
| Cow position: | chr17:22589869-22589209 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 313 |
| Conread position: | 44-664 |
| Cow position: | chr17:22499393-22498773 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 65 |
| Conread position: | 130-670 |
| Cow position: | chr17:22499391-22498851 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 383, 373 |
| Conread position: | 190-684 |
| Cow position: | chr17:22452401-22451907 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 192-682 |
| Cow position: | chr17:22553122-22552632 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-674 |
| Cow position: | chr17:22499394-22498931 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 386, 376 |
| Conread position: | 231-682 |
| Cow position: | chr17:22553167-22552716 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 380, 376 |
| Conread position: | 260-682 |
| Cow position: | chr17:22590304-22589882 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-694 |
| Cow position: | chr17:22553167-22552788 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 379-686 |
| Cow position: | chr17:22473173-22473474 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
Show alignments to all cow chromosomes.