Cow genome map

Conread name: Ss1.1-rsug17_g7.5

Conread position: 1-294
Cow position: chr18:56329135-56328842 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 171, 182

Conread position: 1-302
Cow position: chr18:42693248-42692947 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 197
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 222, 22

Conread position: 1-307
Cow position: chr18:42827616-42827922 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 297

Conread position: 1-386
Cow position: chr18:50281970-50282355 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 245
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 160, 178

Conread position: 1-389
Cow position: chr18:44397891-44397503 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 254
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 174, 161

Conread position: 1-395
Cow position: chr18:43168172-43168564 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 368, 0

Conread position: 1-407
Cow position: chr18:50083998-50084406 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 271
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 275, 268

Conread position: 1-413
Cow position: chr18:50271757-50272168 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 334

Conread position: 1-495
Cow position: chr18:43168004-43168498 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-535
Cow position: chr18:49032582-49032048 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 526, 515

Conread position: 1-557
Cow position: chr18:1418046-1418602 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 154

Conread position: 1-578
Cow position: chr18:42792352-42792929 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 359

Conread position: 1-613
Cow position: chr18:50848883-50849495 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 18

Conread position: 1-619
Cow position: chr18:51400660-51401277 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 108

Conread position: 1-640
Cow position: chr18:56128669-56129306 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 423

Conread position: 1-645
Cow position: chr18:42792268-42792912 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 95

Conread position: 1-661
Cow position: chr18:49032750-49032090 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 187

Conread position: 1-663
Cow position: chr18:44398311-44397649 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 186

Conread position: 1-664
Cow position: chr18:42693836-42693174 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 24

Conread position: 1-666
Cow position: chr18:53635496-53634832 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 660, 463

Conread position: 1-669
Cow position: chr18:41197871-41198539 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-669
Cow position: chr18:42675529-42674861 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 37

Conread position: 1-669
Cow position: chr18:42791848-42792516 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 158

Conread position: 1-669
Cow position: chr18:44254095-44253431 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 96

Conread position: 1-669
Cow position: chr18:50059663-50058995 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 511, 526

Conread position: 1-669
Cow position: chr18:53498013-53498684 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 184

Conread position: 1-669
Cow position: chr18:53525736-53526404 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 83

Conread position: 1-669
Cow position: chr18:54967079-54967743 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 94

Conread position: 1-670
Cow position: chr18:43093458-43092790 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 580, 590

Conread position: 1-670
Cow position: chr18:50099103-50099772 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 265

Conread position: 1-670
Cow position: chr18:50295484-50296141 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 393
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 262, 274

Conread position: 1-670
Cow position: chr18:50848631-50849300 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 94

Conread position: 1-670
Cow position: chr18:50848715-50849384 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 354

Conread position: 1-670
Cow position: chr18:56329555-56328886 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 171

Conread position: 1-676
Cow position: chr18:56329639-56328964 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 526, 514

Conread position: 1-677
Cow position: chr18:41197787-41198463 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 161

Conread position: 1-677
Cow position: chr18:49032918-49032242 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 161

Conread position: 1-677
Cow position: chr18:49033170-49032494 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-682
Cow position: chr18:44398395-44397714 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 190

Conread position: 1-682
Cow position: chr18:49033002-49032321 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-682
Cow position: chr18:50059495-50058814 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 498, 509

Conread position: 1-682
Cow position: chr18:50848211-50848892 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 93

Conread position: 1-683
Cow position: chr18:42792184-42792866 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 506, 502

Conread position: 1-683
Cow position: chr18:50022107-50021419 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 533

Conread position: 1-683
Cow position: chr18:50848547-50849229 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 506, 502

Conread position: 1-684
Cow position: chr18:50059075-50058393 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 335

Conread position: 1-686
Cow position: chr18:53509282-53509967 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 108

Conread position: 1-690
Cow position: chr18:42791428-42792117 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 155

Conread position: 2-225
Cow position: chr18:14453075-14452852 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 150
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-301
Cow position: chr18:50246542-50246839 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 288, 0

Conread position: 2-311
Cow position: chr18:56247356-56247051 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 267, 197

Conread position: 2-389
Cow position: chr18:41948715-41948328 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-391
Cow position: chr18:42827533-42827922 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 94

Conread position: 2-412
Cow position: chr18:51812335-51811925 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 187

Conread position: 2-421
Cow position: chr18:52447993-52448414 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 0

Conread position: 2-435
Cow position: chr18:50083831-50084264 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 95

Conread position: 2-447
Cow position: chr18:42744252-42743807 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 85

Conread position: 2-494
Cow position: chr18:51789092-51788602 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 305
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 106, 93

Conread position: 2-518
Cow position: chr18:41198292-41198804 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 170

Conread position: 2-542
Cow position: chr18:56329386-56328846 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 265

Conread position: 2-574
Cow position: chr18:51752038-51751470 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 353
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 344, 329

Conread position: 2-576
Cow position: chr18:50048590-50048030 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 241

Conread position: 2-625
Cow position: chr18:42675024-42674401 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 85

Conread position: 2-626
Cow position: chr18:43093373-43092751 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 181

Conread position: 2-651
Cow position: chr18:51400577-51401226 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 93

Conread position: 2-659
Cow position: chr18:43167921-43168577 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 156

Conread position: 2-660
Cow position: chr18:51765869-51765211 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 104

Conread position: 2-660
Cow position: chr18:51789428-51788770 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 105

Conread position: 2-660
Cow position: chr18:51812671-51812013 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 107

Conread position: 2-663
Cow position: chr18:42791009-42791670 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 95

Conread position: 2-663
Cow position: chr18:42837891-42837230 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 160

Conread position: 2-667
Cow position: chr18:56128502-56129166 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 181

Conread position: 2-669
Cow position: chr18:41949051-41948384 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 422

Conread position: 2-669
Cow position: chr18:43022942-43022275 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 78

Conread position: 2-669
Cow position: chr18:51400325-51400992 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 105

Conread position: 2-669
Cow position: chr18:51765617-51764950 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 185

Conread position: 2-669
Cow position: chr18:51839264-51838579 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 104

Conread position: 2-669
Cow position: chr18:52427762-52428429 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 154

Conread position: 2-670
Cow position: chr18:42675192-42674524 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 170

Conread position: 2-670
Cow position: chr18:42791345-42792013 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 9

Conread position: 2-671
Cow position: chr18:50059578-50058909 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 160

Conread position: 2-672
Cow position: chr18:43175479-43174809 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 78

Conread position: 2-673
Cow position: chr18:51765701-51765030 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 279

Conread position: 2-677
Cow position: chr18:56329806-56329131 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-679
Cow position: chr18:44398226-44397549 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 160

Conread position: 2-682
Cow position: chr18:41197704-41198384 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 247

Conread position: 2-682
Cow position: chr18:42744672-42743992 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 181

Conread position: 2-682
Cow position: chr18:43022690-43022010 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 169

Conread position: 2-682
Cow position: chr18:43093541-43092861 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 343

Conread position: 2-682
Cow position: chr18:51789512-51788832 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 107

Conread position: 2-682
Cow position: chr18:52433111-52433791 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 154

Conread position: 2-683
Cow position: chr18:42837975-42837294 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 34

Conread position: 2-684
Cow position: chr18:42791093-42791775 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 22

Conread position: 2-686
Cow position: chr18:42791765-42792451 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 61

Conread position: 2-686
Cow position: chr18:43093706-43093025 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 32

Conread position: 2-686
Cow position: chr18:52446985-52447669 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 340

Conread position: 2-686
Cow position: chr18:52447405-52448089 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 255

Conread position: 3-509
Cow position: chr18:50271675-50272181 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 491, 468

Conread position: 3-669
Cow position: chr18:53610421-53609755 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 42

Conread position: 3-669
Cow position: chr18:53635998-53635332 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 249

Conread position: 3-669
Cow position: chr18:56128167-56128833 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 155

Conread position: 3-670
Cow position: chr18:50049093-50048426 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 524, 520

Conread position: 3-670
Cow position: chr18:50099021-50099688 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 249

Conread position: 3-675
Cow position: chr18:50083580-50084252 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 262

Conread position: 3-678
Cow position: chr18:50083328-50084003 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 509, 524

Conread position: 4-503
Cow position: chr18:50295403-50295901 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 93

Conread position: 4-540
Cow position: chr18:50246292-50246828 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-649
Cow position: chr18:14453973-14453325 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 446, 442

Conread position: 4-670
Cow position: chr18:43093947-43093293 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 180

Conread position: 4-670
Cow position: chr18:43167839-43168505 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 236

Conread position: 4-670
Cow position: chr18:50022272-50021600 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 104

Conread position: 4-670
Cow position: chr18:50099190-50099856 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 340

Conread position: 4-672
Cow position: chr18:50048840-50048178 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 36

Conread position: 4-675
Cow position: chr18:50246124-50246795 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 158

Conread position: 4-678
Cow position: chr18:42693917-42693243 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 20

Conread position: 4-682
Cow position: chr18:42693581-42692908 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 295

Conread position: 4-683
Cow position: chr18:50030938-50030259 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 83

Conread position: 4-683
Cow position: chr18:50083749-50084430 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 176

Conread position: 5-327
Cow position: chr18:50021677-50021357 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 202
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 85, 68

Conread position: 5-552
Cow position: chr18:49021615-49022163 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 317
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 51

Conread position: 5-648
Cow position: chr18:55066977-55066335 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 15

Conread position: 5-655
Cow position: chr18:51839429-51838779 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 267

Conread position: 5-657
Cow position: chr18:42694000-42693348 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 19

Conread position: 5-657
Cow position: chr18:53586530-53585879 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 507, 15

Conread position: 5-663
Cow position: chr18:54966914-54967573 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 179

Conread position: 5-670
Cow position: chr18:50059239-50058574 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 104

Conread position: 5-670
Cow position: chr18:53635912-53635247 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 266

Conread position: 5-670
Cow position: chr18:56128253-56128918 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 104

Conread position: 5-671
Cow position: chr18:50295236-50295901 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 260

Conread position: 5-676
Cow position: chr18:50098939-50099609 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 417, 429

Conread position: 5-678
Cow position: chr18:43167672-43168345 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 24

Conread position: 5-681
Cow position: chr18:50059407-50058731 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 104

Conread position: 5-681
Cow position: chr18:53586782-53586107 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 15

Conread position: 5-681
Cow position: chr18:53586950-53586275 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 15

Conread position: 5-682
Cow position: chr18:42791516-42792193 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 157

Conread position: 5-682
Cow position: chr18:50848803-50849480 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 367

Conread position: 5-690
Cow position: chr18:42791936-42792621 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 502, 522

Conread position: 6-664
Cow position: chr18:42960496-42959844 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 59

Conread position: 6-666
Cow position: chr18:54993289-54993947 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 157

Conread position: 6-684
Cow position: chr18:50059322-50058643 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 256

Conread position: 7-669
Cow position: chr18:54979610-54980272 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 88

Conread position: 8-249
Cow position: chr18:42959669-42959428 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 157
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 8-669
Cow position: chr18:44154403-44153746 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 92

Conread position: 8-669
Cow position: chr18:44184835-44184174 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 154

Conread position: 8-669
Cow position: chr18:56433351-56434011 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 394
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 38

Conread position: 8-682
Cow position: chr18:42985173-42984499 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 80

Conread position: 8-682
Cow position: chr18:44184667-44183993 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 163

Conread position: 9-226
Cow position: chr18:43053407-43053190 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-289
Cow position: chr18:44240565-44240845 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 9-346
Cow position: chr18:43048676-43048339 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 168, 149

Conread position: 9-353
Cow position: chr18:51812244-51811900 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 219
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 335, 326

Conread position: 9-452
Cow position: chr18:44397967-44397524 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 178

Conread position: 9-470
Cow position: chr18:44184414-44183953 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 153

Conread position: 9-489
Cow position: chr18:52428525-52429004 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 248

Conread position: 9-495
Cow position: chr18:42837632-42837146 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-498
Cow position: chr18:44253264-44252786 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 307
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 233, 147

Conread position: 9-516
Cow position: chr18:51812412-51811905 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 504, 494

Conread position: 9-564
Cow position: chr18:52433622-52434177 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 326

Conread position: 9-585
Cow position: chr18:53560231-53560802 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 6

Conread position: 9-625
Cow position: chr18:42985088-42984472 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 71

Conread position: 9-641
Cow position: chr18:1417970-1418602 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 441, 437

Conread position: 9-649
Cow position: chr18:43175136-43174496 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 249

Conread position: 9-662
Cow position: chr18:52447748-52448403 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 326

Conread position: 9-663
Cow position: chr18:42744497-42743843 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 158

Conread position: 9-663
Cow position: chr18:43120187-43119533 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 154

Conread position: 9-667
Cow position: chr18:53610331-53609674 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 174

Conread position: 9-669
Cow position: chr18:40306305-40306965 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 153

Conread position: 9-669
Cow position: chr18:40324580-40323921 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 326

Conread position: 9-669
Cow position: chr18:41949212-41948552 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-669
Cow position: chr18:42744581-42743921 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 420, 410

Conread position: 9-669
Cow position: chr18:42960079-42959428 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 253

Conread position: 9-669
Cow position: chr18:42985424-42984764 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 149

Conread position: 9-670
Cow position: chr18:41949128-41948467 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 153

Conread position: 9-670
Cow position: chr18:51368466-51367806 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 153

Conread position: 9-674
Cow position: chr18:42960163-42959507 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 153

Conread position: 9-678
Cow position: chr18:51766030-51765361 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 60

Conread position: 9-681
Cow position: chr18:33064382-33063710 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 86

Conread position: 9-681
Cow position: chr18:51765946-51765274 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 100

Conread position: 9-682
Cow position: chr18:41948960-41948289 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 411, 420

Conread position: 9-682
Cow position: chr18:41949296-41948623 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 242

Conread position: 9-682
Cow position: chr18:42792024-42792697 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 258

Conread position: 9-682
Cow position: chr18:43120271-43119598 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 238

Conread position: 9-682
Cow position: chr18:43175220-43174547 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 153

Conread position: 9-682
Cow position: chr18:43175556-43174883 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 153

Conread position: 9-682
Cow position: chr18:44240145-44240818 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 71

Conread position: 9-682
Cow position: chr18:44253503-44252851 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 127

Conread position: 9-682
Cow position: chr18:51368046-51367374 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 238

Conread position: 9-682
Cow position: chr18:51789589-51788916 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 240

Conread position: 9-682
Cow position: chr18:51812748-51812075 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 267

Conread position: 9-682
Cow position: chr18:52428021-52428694 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 90

Conread position: 9-686
Cow position: chr18:43093618-43092941 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 174

Conread position: 9-686
Cow position: chr18:52428189-52428866 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 167

Conread position: 9-686
Cow position: chr18:52433370-52434047 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 166

Conread position: 9-686
Cow position: chr18:52447244-52447921 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 75

Conread position: 9-695
Cow position: chr18:51400416-51401104 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 674, 0

Conread position: 10-495
Cow position: chr18:51367710-51367225 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 304
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 57, 61

Conread position: 10-543
Cow position: chr18:42985003-42984470 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 70

Conread position: 10-543
Cow position: chr18:43022514-43021981 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 78

Conread position: 10-543
Cow position: chr18:44240314-44240847 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 84

Conread position: 10-658
Cow position: chr18:44239810-44240458 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 80

Conread position: 10-662
Cow position: chr18:43023018-43022365 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 508, 493

Conread position: 10-664
Cow position: chr18:55067058-55066403 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 174

Conread position: 10-686
Cow position: chr18:43022766-43022090 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 241

Conread position: 10-686
Cow position: chr18:44240062-44240738 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 152

Conread position: 11-244
Cow position: chr18:52011801-52011568 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 88

Conread position: 11-552
Cow position: chr18:50281812-50282353 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 11-658
Cow position: chr18:40086126-40085474 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 84

Conread position: 11-664
Cow position: chr18:44154061-44153427 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 11-665
Cow position: chr18:54993042-54993696 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 62

Conread position: 11-668
Cow position: chr18:53586693-53586036 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 88

Conread position: 11-669
Cow position: chr18:42985254-42984596 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 164

Conread position: 11-669
Cow position: chr18:51789671-51789013 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 176

Conread position: 11-669
Cow position: chr18:53559812-53560470 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 173

Conread position: 11-670
Cow position: chr18:33064464-33063805 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 173

Conread position: 11-670
Cow position: chr18:52012389-52011730 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 88

Conread position: 11-673
Cow position: chr18:49022616-49023278 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 68

Conread position: 11-675
Cow position: chr18:53587029-53586365 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 86

Conread position: 11-680
Cow position: chr18:51839171-51838485 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 524

Conread position: 11-682
Cow position: chr18:51812830-51812159 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 176

Conread position: 11-683
Cow position: chr18:50049171-50048497 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 256

Conread position: 12-464
Cow position: chr18:40075246-40075698 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 283
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 82, 87

Conread position: 12-634
Cow position: chr18:44398132-44397510 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 171

Conread position: 12-635
Cow position: chr18:44184579-44183956 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 175

Conread position: 12-669
Cow position: chr18:40306392-40307049 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 423, 413

Conread position: 12-669
Cow position: chr18:51789838-51789181 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 160

Conread position: 12-669
Cow position: chr18:56434025-56434673 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 75

Conread position: 12-676
Cow position: chr18:53635653-53634990 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 171

Conread position: 12-678
Cow position: chr18:41197546-41198212 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 606, 602

Conread position: 12-678
Cow position: chr18:53559981-53560647 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 96

Conread position: 12-678
Cow position: chr18:54992707-54993373 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 151

Conread position: 12-695
Cow position: chr18:55017935-55018620 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 85

Conread position: 13-243
Cow position: chr18:56494320-56494547 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 154
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 192, 159

Conread position: 13-316
Cow position: chr18:51873675-51873975 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 197
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 82, 25

Conread position: 13-398
Cow position: chr18:55523952-55524337 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 245
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 77, 84

Conread position: 13-495
Cow position: chr18:50251058-50251537 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 88

Conread position: 13-495
Cow position: chr18:52012051-52011569 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 75

Conread position: 13-625
Cow position: chr18:43022595-43021983 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 76

Conread position: 13-648
Cow position: chr18:53586607-53585972 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 84

Conread position: 13-664
Cow position: chr18:42674929-42674274 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 253

Conread position: 13-664
Cow position: chr18:54992876-54993527 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 322

Conread position: 13-675
Cow position: chr18:53636072-53635410 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 175

Conread position: 13-677
Cow position: chr18:49033074-49032410 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 175

Conread position: 13-677
Cow position: chr18:56128597-56129259 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 569, 535

Conread position: 13-678
Cow position: chr18:53635568-53634905 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 535, 0

Conread position: 13-681
Cow position: chr18:51839505-51838837 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 96

Conread position: 13-682
Cow position: chr18:40324744-40324075 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 145

Conread position: 13-682
Cow position: chr18:41198135-41198800 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 149

Conread position: 13-682
Cow position: chr18:56329711-56329042 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 159

Conread position: 13-686
Cow position: chr18:40074995-40075668 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 117

Conread position: 13-686
Cow position: chr18:55018188-55018862 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 67

Conread position: 14-289
Cow position: chr18:42837375-42837100 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 163, 144

Conread position: 14-309
Cow position: chr18:14453147-14452852 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 200
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 14-375
Cow position: chr18:42744156-42743795 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 237
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 14-375
Cow position: chr18:49022955-49023316 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 239
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 157, 148

Conread position: 14-382
Cow position: chr18:56329206-56328838 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-399
Cow position: chr18:43119846-43119461 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 254
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 167, 148

Conread position: 14-555
Cow position: chr18:50271602-50272143 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 243

Conread position: 14-580
Cow position: chr18:52012134-52011568 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 85

Conread position: 14-597
Cow position: chr18:50048914-50048331 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 251

Conread position: 14-603
Cow position: chr18:50083675-50084264 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 81

Conread position: 14-637
Cow position: chr18:40075080-40075703 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 74

Conread position: 14-661
Cow position: chr18:50058894-50058256 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 253

Conread position: 14-663
Cow position: chr18:40324659-40324010 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 49

Conread position: 14-663
Cow position: chr18:42675432-42674783 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 345

Conread position: 14-663
Cow position: chr18:44184913-44184264 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 170

Conread position: 14-663
Cow position: chr18:51367873-51367225 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 64

Conread position: 14-663
Cow position: chr18:52012218-52011569 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 173

Conread position: 14-663
Cow position: chr18:52447669-52448319 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 248

Conread position: 14-664
Cow position: chr18:52428278-52428928 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 85

Conread position: 14-664
Cow position: chr18:52433459-52434109 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 77

Conread position: 14-667
Cow position: chr18:56493901-56494551 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 251

Conread position: 14-668
Cow position: chr18:50271518-50272171 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 83

Conread position: 14-670
Cow position: chr18:42675264-42674608 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 59

Conread position: 14-670
Cow position: chr18:51789917-51789264 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 24

Conread position: 14-670
Cow position: chr18:55523449-55524105 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 148

Conread position: 14-674
Cow position: chr18:50271434-50272093 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 648, 0

Conread position: 14-675
Cow position: chr18:50048998-50048337 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 193

Conread position: 14-675
Cow position: chr18:56433857-56434510 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 187

Conread position: 14-677
Cow position: chr18:56330046-56329383 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 269

Conread position: 14-681
Cow position: chr18:56316274-56316941 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 145

Conread position: 14-682
Cow position: chr18:41949375-41948707 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 325

Conread position: 14-682
Cow position: chr18:56330130-56329462 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 173

Conread position: 14-686
Cow position: chr18:50083423-50084095 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 153

Conread position: 14-686
Cow position: chr18:52447333-52448005 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 27

Conread position: 15-477
Cow position: chr18:14453314-14452852 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 65

Conread position: 15-624
Cow position: chr18:40306731-40307340 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 147

Conread position: 15-676
Cow position: chr18:40306479-40307140 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 172

Conread position: 15-676
Cow position: chr18:56329877-56329216 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 76

Conread position: 15-681
Cow position: chr18:49033240-49032574 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-663
Cow position: chr18:51766103-51765460 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 21

Conread position: 17-669
Cow position: chr18:42837792-42837140 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 63

Conread position: 17-669
Cow position: chr18:52427861-52428513 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 318

Conread position: 17-672
Cow position: chr18:40306565-40307220 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 417, 408

Conread position: 17-687
Cow position: chr18:49032650-49031978 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 612, 623

Conread position: 17-691
Cow position: chr18:51368627-51367952 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 25

Conread position: 18-663
Cow position: chr18:51969168-51969793 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 66

Conread position: 20-322
Cow position: chr18:43119756-43119454 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 197
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 233, 225

Conread position: 20-354
Cow position: chr18:42837453-42837119 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 226
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 157, 138

Conread position: 20-414
Cow position: chr18:53509637-53510029 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 246
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 84

Conread position: 20-465
Cow position: chr18:40306904-40307349 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 279
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 88, 74

Conread position: 20-630
Cow position: chr18:56329452-56328842 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 20-659
Cow position: chr18:44154304-44153672 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 246

Conread position: 20-663
Cow position: chr18:55523623-55524266 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 78

Conread position: 20-668
Cow position: chr18:55523539-55524187 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 175

Conread position: 20-669
Cow position: chr18:54992967-54993616 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 72

Conread position: 20-670
Cow position: chr18:33064287-33063637 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 167

Conread position: 20-673
Cow position: chr18:33064539-33063886 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 68

Conread position: 20-681
Cow position: chr18:42790943-42791604 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 139

Conread position: 20-682
Cow position: chr18:49021714-49022365 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 389
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 371, 400

Conread position: 20-682
Cow position: chr18:49032815-49032153 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 76

Conread position: 20-683
Cow position: chr18:51752353-51751693 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 18

Conread position: 20-689
Cow position: chr18:56329956-56329287 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 152

Conread position: 20-695
Cow position: chr18:42675342-42674668 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 152

Conread position: 21-563
Cow position: chr18:52447844-52448387 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 454, 0

Conread position: 21-585
Cow position: chr18:51367783-51367219 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 129

Conread position: 21-663
Cow position: chr18:44154219-44153595 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 0

Conread position: 21-669
Cow position: chr18:42985580-42984932 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 151

Conread position: 21-669
Cow position: chr18:51367950-51367303 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 142

Conread position: 21-670
Cow position: chr18:42675590-42674944 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 22

Conread position: 21-670
Cow position: chr18:42790860-42791509 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 225

Conread position: 21-670
Cow position: chr18:55008707-55009354 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 397
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 69, 59

Conread position: 21-674
Cow position: chr18:42675089-42674436 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 154

Conread position: 21-676
Cow position: chr18:54979708-54980365 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 141

Conread position: 21-682
Cow position: chr18:42694068-42693407 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 82

Conread position: 21-682
Cow position: chr18:52427949-52428610 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 155

Conread position: 21-682
Cow position: chr18:52433298-52433959 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 314

Conread position: 21-682
Cow position: chr18:52447508-52448169 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 21-682
Cow position: chr18:52447592-52448253 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 477, 483

Conread position: 21-686
Cow position: chr18:1417814-1418479 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 158

Conread position: 22-381
Cow position: chr18:42959739-42959379 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 237
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 155, 140

Conread position: 22-417
Cow position: chr18:53498541-53498937 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 253
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 65, 75

Conread position: 22-531
Cow position: chr18:50030750-50030243 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 322
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 150, 315

Conread position: 22-541
Cow position: chr18:22634705-22635224 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 323
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 102, 107

Conread position: 22-564
Cow position: chr18:55008792-55009333 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 141

Conread position: 22-574
Cow position: chr18:43120006-43119454 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 140

Conread position: 22-585
Cow position: chr18:50250983-50251543 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 77

Conread position: 22-625
Cow position: chr18:44240242-44240845 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 395

Conread position: 22-633
Cow position: chr18:33093041-33092428 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 145

Conread position: 22-636
Cow position: chr18:50246226-50246838 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 243

Conread position: 22-663
Cow position: chr18:49033317-49032676 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 73

Conread position: 22-663
Cow position: chr18:50250902-50251537 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 25

Conread position: 22-664
Cow position: chr18:54979541-54980183 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 66

Conread position: 22-665
Cow position: chr18:44239990-44240634 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 234

Conread position: 22-665
Cow position: chr18:52428370-52429012 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 313

Conread position: 22-669
Cow position: chr18:40086871-40086222 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 97

Conread position: 22-669
Cow position: chr18:42791281-42791928 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 162

Conread position: 22-669
Cow position: chr18:50848400-50849047 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 313

Conread position: 22-669
Cow position: chr18:52433551-52434198 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 313

Conread position: 22-669
Cow position: chr18:53560159-53560802 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 243

Conread position: 22-669
Cow position: chr18:54992801-54993448 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 141

Conread position: 22-669
Cow position: chr18:55018113-55018761 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 142

Conread position: 22-670
Cow position: chr18:33064789-33064141 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 77

Conread position: 22-670
Cow position: chr18:42792121-42792769 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 314

Conread position: 22-670
Cow position: chr18:50848484-50849132 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 235

Conread position: 22-671
Cow position: chr18:50099628-50100277 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 327

Conread position: 22-673
Cow position: chr18:53635811-53635160 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 161

Conread position: 22-673
Cow position: chr18:56128354-56129005 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 161

Conread position: 22-678
Cow position: chr18:50099712-50100366 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 243

Conread position: 22-678
Cow position: chr18:54967016-54967672 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 159

Conread position: 22-682
Cow position: chr18:40086365-40085714 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 478, 149

Conread position: 22-682
Cow position: chr18:41197640-41198300 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-682
Cow position: chr18:42791701-42792361 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 162

Conread position: 22-682
Cow position: chr18:43175291-43174631 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 244

Conread position: 22-682
Cow position: chr18:50059138-50058480 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 157

Conread position: 22-682
Cow position: chr18:52428118-52428778 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 313

Conread position: 22-683
Cow position: chr18:50246058-50246719 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 160

Conread position: 22-685
Cow position: chr18:56248176-56247503 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 15

Conread position: 23-452
Cow position: chr18:42827470-42827899 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 156

Conread position: 23-470
Cow position: chr18:50281908-50282355 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 240

Conread position: 23-495
Cow position: chr18:50021830-50021357 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 141

Conread position: 23-501
Cow position: chr18:51969575-51970042 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 292
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 23-540
Cow position: chr18:49022796-49023313 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 325
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 116, 108

Conread position: 23-607
Cow position: chr18:51874129-51874706 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 550, 30

Conread position: 23-625
Cow position: chr18:42744399-42743797 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 139

Conread position: 23-642
Cow position: chr18:56316115-56316734 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 76

Conread position: 23-647
Cow position: chr18:54967938-54968561 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 384
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 77, 57

Conread position: 23-650
Cow position: chr18:55523710-55524337 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 139

Conread position: 23-658
Cow position: chr18:44153888-44153267 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 385
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 504, 224

Conread position: 23-660
Cow position: chr18:54979878-54980515 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 392, 402

Conread position: 23-660
Cow position: chr18:56316199-56316836 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 223

Conread position: 23-663
Cow position: chr18:56434111-56434751 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 253

Conread position: 23-664
Cow position: chr18:50099461-50100102 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 243

Conread position: 23-664
Cow position: chr18:54967353-54967991 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 388
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 160, 153

Conread position: 23-669
Cow position: chr18:43167774-43168420 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 23-669
Cow position: chr18:51752185-51751538 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 85

Conread position: 23-669
Cow position: chr18:51752269-51751623 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 559, 574

Conread position: 23-669
Cow position: chr18:51969407-51970041 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 207

Conread position: 23-669
Cow position: chr18:54979962-54980607 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 140

Conread position: 23-669
Cow position: chr18:55017862-55018508 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 65

Conread position: 23-669
Cow position: chr18:56434195-56434840 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 234

Conread position: 23-670
Cow position: chr18:54967854-54968499 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 76

Conread position: 23-671
Cow position: chr18:50022508-50021854 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 142

Conread position: 23-673
Cow position: chr18:42724774-42724124 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 376
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 35, 46

Conread position: 23-676
Cow position: chr18:55017778-55018430 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 24

Conread position: 23-677
Cow position: chr18:56330205-56329551 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 23-678
Cow position: chr18:42791198-42791853 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 234

Conread position: 23-681
Cow position: chr18:40074921-40075579 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 192

Conread position: 23-681
Cow position: chr18:50083516-50084174 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 410

Conread position: 23-682
Cow position: chr18:51368536-51367877 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 86

Conread position: 23-682
Cow position: chr18:51789743-51789084 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 72

Conread position: 23-682
Cow position: chr18:56247747-56247098 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 544, 224

Conread position: 23-684
Cow position: chr18:51874045-51874699 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 86

Conread position: 23-686
Cow position: chr18:40324818-40324155 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 209

Conread position: 23-686
Cow position: chr18:53498203-53498872 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 75

Conread position: 24-686
Cow position: chr18:43167609-43168269 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 25-677
Cow position: chr18:49033398-49032746 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 72

Conread position: 25-682
Cow position: chr18:42694148-42693491 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 546, 541

Conread position: 25-686
Cow position: chr18:54967772-54968430 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 409
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 68, 55

Conread position: 26-626
Cow position: chr18:22634625-22635225 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 361
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 137, 165

Conread position: 26-669
Cow position: chr18:42960314-42959680 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 132

Conread position: 26-669
Cow position: chr18:44154469-44153830 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 159

Conread position: 26-669
Cow position: chr18:50031081-50030436 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 136

Conread position: 26-683
Cow position: chr18:14454035-14453378 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 334

Conread position: 27-563
Cow position: chr18:56247575-56247051 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 27-674
Cow position: chr18:53587098-53586450 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 70

Conread position: 27-678
Cow position: chr18:50848072-50848720 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 66

Conread position: 28-411
Cow position: chr18:43048741-43048358 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 28-669
Cow position: chr18:51765759-51765118 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 223

Conread position: 28-670
Cow position: chr18:53560081-53560723 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 51

Conread position: 28-671
Cow position: chr18:41197982-41198625 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 28-671
Cow position: chr18:41198066-41198709 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 226

Conread position: 28-675
Cow position: chr18:52012288-52011641 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 395
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 61, 68

Conread position: 28-686
Cow position: chr18:52446927-52447585 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 145

Conread position: 32-682
Cow position: chr18:40306664-40307314 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 124

Conread position: 33-664
Cow position: chr18:55067116-55066487 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 7

Conread position: 35-536
Cow position: chr18:50021902-50021398 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 68

Conread position: 35-670
Cow position: chr18:50245819-50246454 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 62

Conread position: 35-672
Cow position: chr18:53610473-53609836 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 220

Conread position: 35-675
Cow position: chr18:56128115-56128755 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 61

Conread position: 35-682
Cow position: chr18:43094000-43093365 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 270

Conread position: 35-682
Cow position: chr18:50848329-50848976 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 39-636
Cow position: chr18:50281756-50282353 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 218

Conread position: 39-638
Cow position: chr18:42724506-42723907 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 349
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 243, 249

Conread position: 39-659
Cow position: chr18:50250840-50251447 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 463, 58

Conread position: 39-664
Cow position: chr18:53509404-53510027 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 389
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 132, 153

Conread position: 39-669
Cow position: chr18:56493842-56494472 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 59

Conread position: 39-678
Cow position: chr18:50245991-50246630 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 476, 465

Conread position: 40-681
Cow position: chr18:56315964-56316605 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 68

Conread position: 41-586
Cow position: chr18:51838786-51838246 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 323
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 196, 0

Conread position: 41-669
Cow position: chr18:33064938-33064310 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 294

Conread position: 41-669
Cow position: chr18:52427549-52428177 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 90

Conread position: 41-669
Cow position: chr18:52432898-52433526 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 90

Conread position: 41-670
Cow position: chr18:33065106-33064477 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 38

Conread position: 41-670
Cow position: chr18:53635708-53635079 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 130

Conread position: 41-670
Cow position: chr18:56128457-56129086 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 129

Conread position: 41-672
Cow position: chr18:40306253-40306884 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 562, 558

Conread position: 41-677
Cow position: chr18:42724588-42723952 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 363
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 300, 295

Conread position: 41-677
Cow position: chr18:55008643-55009279 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 129

Conread position: 41-678
Cow position: chr18:43094077-43093453 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 42-658
Cow position: chr18:51400533-51401149 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 42-663
Cow position: chr18:53498138-53498762 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 67

Conread position: 42-669
Cow position: chr18:44239758-44240385 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 38

Conread position: 42-682
Cow position: chr18:42791637-42792277 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 215

Conread position: 43-661
Cow position: chr18:42827406-42828027 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 518, 607

Conread position: 43-669
Cow position: chr18:40324882-40324256 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 216

Conread position: 43-682
Cow position: chr18:42744715-42744076 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 485, 477

Conread position: 45-676
Cow position: chr18:43175352-43174721 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 122

Conread position: 45-684
Cow position: chr18:43120319-43119680 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 302

Conread position: 49-678
Cow position: chr18:50083290-50083919 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 289

Conread position: 49-681
Cow position: chr18:1417926-1418558 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 241

Conread position: 50-691
Cow position: chr18:49022489-49023128 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 39

Conread position: 52-669
Cow position: chr18:40306180-40306797 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 110

Conread position: 52-686
Cow position: chr18:43120396-43119762 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 28

Conread position: 54-683
Cow position: chr18:50281687-50282316 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 58-681
Cow position: chr18:56493774-56494400 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 15

Conread position: 59-566
Cow position: chr18:53571829-53572323 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 319
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 39, 29

Conread position: 59-664
Cow position: chr18:50098909-50099514 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 103

Conread position: 59-664
Cow position: chr18:53559692-53560297 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 29

Conread position: 59-681
Cow position: chr18:53509256-53509878 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 301

Conread position: 59-682
Cow position: chr18:53636110-53635487 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 368
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 35, 50

Conread position: 59-682
Cow position: chr18:56128055-56128678 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 377
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 34

Conread position: 59-686
Cow position: chr18:53525710-53526337 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 301

Conread position: 59-695
Cow position: chr18:51839543-51838905 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 102

Conread position: 61-670
Cow position: chr18:50031130-50030519 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 197

Conread position: 63-669
Cow position: chr18:51812862-51812256 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 32

Conread position: 63-677
Cow position: chr18:44398417-44397803 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 356

Conread position: 63-682
Cow position: chr18:51969045-51969644 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 129

Conread position: 65-310
Cow position: chr18:43053435-43053190 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 157
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 65-663
Cow position: chr18:55523332-55523930 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 200

Conread position: 65-670
Cow position: chr18:53610527-53609922 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 367
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 22, 44

Conread position: 65-675
Cow position: chr18:43175584-43174974 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 111

Conread position: 68-663
Cow position: chr18:53587140-53586545 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 362
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 68, 43

Conread position: 68-669
Cow position: chr18:54979503-54980104 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 115

Conread position: 68-686
Cow position: chr18:50022376-50021755 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 114

Conread position: 69-681
Cow position: chr18:50295216-50295828 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 140

Conread position: 74-677
Cow position: chr18:42675621-42675021 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 71

Conread position: 74-677
Cow position: chr18:49022261-49022862 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 374
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 26, 10

Conread position: 75-686
Cow position: chr18:50059674-50059060 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 286

Conread position: 77-669
Cow position: chr18:42837984-42837392 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 262

Conread position: 79-660
Cow position: chr18:42694178-42693597 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 348
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 420, 426

Conread position: 79-674
Cow position: chr18:49022600-49023195 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 12

Conread position: 87-670
Cow position: chr18:54992700-54993281 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 9

Conread position: 87-674
Cow position: chr18:54979440-54980025 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 9

Conread position: 87-690
Cow position: chr18:56330225-56329622 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 10

Conread position: 89-663
Cow position: chr18:50281638-50282212 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 33

Conread position: 89-670
Cow position: chr18:50271425-50272006 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 177

Conread position: 92-669
Cow position: chr18:44154487-44153908 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 162

Conread position: 92-682
Cow position: chr18:40086969-40086377 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 195

Conread position: 92-682
Cow position: chr18:44184919-44184329 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 98-679
Cow position: chr18:54966924-54967505 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 356
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 241, 237

Conread position: 98-682
Cow position: chr18:43167513-43168097 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 86

Conread position: 103-663
Cow position: chr18:42985582-42985022 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 232

Conread position: 103-664
Cow position: chr18:22634536-22635095 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 360
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 46, 86

Conread position: 103-664
Cow position: chr18:56433695-56434248 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 347
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 69, 10

Conread position: 106-604
Cow position: chr18:55497641-55497143 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 289
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 170, 164

Conread position: 107-624
Cow position: chr18:51765428-51764911 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 80

Conread position: 107-664
Cow position: chr18:33093040-33092483 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 229

Conread position: 107-664
Cow position: chr18:50245723-50246280 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 28

Conread position: 107-667
Cow position: chr18:44253334-44252785 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 80

Conread position: 107-674
Cow position: chr18:55008459-55009024 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 350
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 235, 93

Conread position: 107-677
Cow position: chr18:56316115-56316685 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 464, 459

Conread position: 107-682
Cow position: chr18:41197557-41198132 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 486

Conread position: 107-682
Cow position: chr18:51874045-51874613 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 55

Conread position: 107-682
Cow position: chr18:52433048-52433623 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 150

Conread position: 107-686
Cow position: chr18:52427699-52428278 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 150

Conread position: 107-689
Cow position: chr18:43120500-43119927 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 54

Conread position: 108-652
Cow position: chr18:14454037-14453493 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 144

Conread position: 108-669
Cow position: chr18:52427532-52428093 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 30

Conread position: 108-686
Cow position: chr18:52432881-52433459 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 30

Conread position: 109-669
Cow position: chr18:43023087-43022527 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 62

Conread position: 111-682
Cow position: chr18:44398453-44397882 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 476

Conread position: 112-615
Cow position: chr18:43048741-43048240 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 154

Conread position: 114-669
Cow position: chr18:42744728-42744173 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 65

Conread position: 115-669
Cow position: chr18:44253817-44253276 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 304

Conread position: 117-669
Cow position: chr18:53509230-53509782 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 134

Conread position: 117-678
Cow position: chr18:53525684-53526245 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 134

Conread position: 118-561
Cow position: chr18:14453295-14452852 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 69

Conread position: 118-678
Cow position: chr18:50250835-50251384 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 354
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 213, 53

Conread position: 124-669
Cow position: chr18:51400279-51400824 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 125-670
Cow position: chr18:51838786-51838246 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 326
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 373, 196

Conread position: 128-679
Cow position: chr18:49021490-49022037 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 330
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 112, 8

Conread position: 130-670
Cow position: chr18:33093101-33092561 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 58

Conread position: 130-673
Cow position: chr18:40324960-40324420 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 42

Conread position: 130-687
Cow position: chr18:49022233-49022790 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 342
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 53

Conread position: 130-690
Cow position: chr18:49033377-49032817 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 52

Conread position: 131-682
Cow position: chr18:40306175-40306726 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 114

Conread position: 131-682
Cow position: chr18:51969029-51969562 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 52

Conread position: 134-684
Cow position: chr18:53636119-53635569 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 51

Conread position: 134-684
Cow position: chr18:56128046-56128596 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 28

Conread position: 136-671
Cow position: chr18:41197502-41198037 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 20

Conread position: 137-645
Cow position: chr18:53571823-53572318 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 310
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 204, 177

Conread position: 137-669
Cow position: chr18:55067098-55066566 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 110

Conread position: 137-675
Cow position: chr18:55523320-55523857 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 199

Conread position: 137-678
Cow position: chr18:51789881-51789340 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 46

Conread position: 137-681
Cow position: chr18:53559686-53560230 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 337
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 204, 198

Conread position: 137-682
Cow position: chr18:51839549-51839004 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 30

Conread position: 138-668
Cow position: chr18:56248225-56247690 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 342
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 373, 49

Conread position: 138-681
Cow position: chr18:50295201-50295744 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 141

Conread position: 139-663
Cow position: chr18:53497986-53498511 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 335
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 113, 27

Conread position: 139-670
Cow position: chr18:54966881-54967412 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 320
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 205, 196

Conread position: 145-394
Cow position: chr18:43053439-43053190 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 199, 190

Conread position: 150-670
Cow position: chr18:56247788-56247276 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 0

Conread position: 152-671
Cow position: chr18:50031123-50030605 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 184

Conread position: 153-678
Cow position: chr18:50098919-50099443 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 206

Conread position: 156-681
Cow position: chr18:53587137-53586611 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 322
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 18, 40

Conread position: 158-686
Cow position: chr18:50271410-50271938 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 201

Conread position: 173-660
Cow position: chr18:51874027-51874507 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 85

Conread position: 173-678
Cow position: chr18:42827368-42827873 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 84

Conread position: 178-669
Cow position: chr18:52432867-52433358 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 311
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 64, 84

Conread position: 178-682
Cow position: chr18:52427518-52428022 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 313
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 67, 84

Conread position: 180-669
Cow position: chr18:43023100-43022611 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 71

Conread position: 180-669
Cow position: chr18:44239728-44240217 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 67

Conread position: 180-684
Cow position: chr18:44154483-44153977 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 178

Conread position: 181-670
Cow position: chr18:42985588-42985099 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 238

Conread position: 182-670
Cow position: chr18:52012468-52011982 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 311
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 237, 21

Conread position: 182-678
Cow position: chr18:51813076-51812583 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 26

Conread position: 185-651
Cow position: chr18:51970316-51970774 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 286
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 65, 87

Conread position: 187-677
Cow position: chr18:14454042-14453552 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 69

Conread position: 191-670
Cow position: chr18:50245723-50246202 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 299
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 28, 34

Conread position: 191-676
Cow position: chr18:44254073-44253592 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 193-670
Cow position: chr18:52012539-52012066 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 268
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 143, 72

Conread position: 193-694
Cow position: chr18:51400264-51400767 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 316
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 256, 269

Conread position: 194-689
Cow position: chr18:49033397-49032902 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 64

Conread position: 195-686
Cow position: chr18:50848072-50848560 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 309
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 58, 72

Conread position: 196-672
Cow position: chr18:43048741-43048267 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 213

Conread position: 196-686
Cow position: chr18:50022587-50022094 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 301
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 171, 0

Conread position: 203-678
Cow position: chr18:51766087-51765613 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 203-678
Cow position: chr18:55067116-55066641 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 296
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 64, 54

Conread position: 205-684
Cow position: chr18:33065110-33064631 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 301
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 27, 43

Conread position: 207-670
Cow position: chr18:40306167-40306630 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 290
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 38, 60

Conread position: 208-670
Cow position: chr18:53636129-53635667 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 285
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 37, 59

Conread position: 208-681
Cow position: chr18:56128036-56128509 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 300
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 37, 58

Conread position: 209-645
Cow position: chr18:14453288-14452852 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 212-478
Cow position: chr18:43053456-43053190 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 172
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 217, 207

Conread position: 215-681
Cow position: chr18:50083288-50083754 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 144

Conread position: 216-682
Cow position: chr18:51789967-51789504 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 294
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 29, 51

Conread position: 218-685
Cow position: chr18:41197500-41197967 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 49

Conread position: 224-651
Cow position: chr18:56248223-56247807 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 18

Conread position: 224-682
Cow position: chr18:50295203-50295661 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 225-663
Cow position: chr18:43175592-43175154 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 110

Conread position: 255-663
Cow position: chr18:41949386-41948978 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 259-669
Cow position: chr18:44154488-44154075 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 163

Conread position: 259-669
Cow position: chr18:44184920-44184510 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 165

Conread position: 259-682
Cow position: chr18:42675604-42675184 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 266
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 52, 48

Conread position: 260-682
Cow position: chr18:43023104-43022682 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 100

Conread position: 261-682
Cow position: chr18:44239725-44240146 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 74

Conread position: 265-676
Cow position: chr18:42985588-42985177 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 238

Conread position: 269-686
Cow position: chr18:42790856-42791273 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 87

Conread position: 271-670
Cow position: chr18:40074917-40075316 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 259
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 75, 65

Conread position: 273-681
Cow position: chr18:50083260-50083670 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 20

Conread position: 275-636
Cow position: chr18:50059725-50059364 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 235
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 276-669
Cow position: chr18:22634623-22635016 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 250
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 64, 59

Conread position: 281-669
Cow position: chr18:43048740-43048352 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 55

Conread position: 284-681
Cow position: chr18:53610560-53610163 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 242
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 66, 51

Conread position: 285-686
Cow position: chr18:14453296-14452895 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 71

Conread position: 292-690
Cow position: chr18:56315964-56316362 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 253
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 48, 38

Conread position: 293-678
Cow position: chr18:43094159-43093777 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 235, 43

Conread position: 293-681
Cow position: chr18:55067110-55066722 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 240
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 135, 151

Conread position: 294-685
Cow position: chr18:44398439-44398047 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 295-562
Cow position: chr18:43053457-43053190 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 218, 208

Conread position: 295-671
Cow position: chr18:50049225-50048845 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 66

Conread position: 295-682
Cow position: chr18:42827406-42827793 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 295-686
Cow position: chr18:40324882-40324491 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 40

Conread position: 297-678
Cow position: chr18:50281678-50282059 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 237
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 50, 62

Conread position: 297-684
Cow position: chr18:43167544-43167931 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 244
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 169, 152

Conread position: 301-603
Cow position: chr18:51873708-51874010 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 195
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 41

Conread position: 302-682
Cow position: chr18:51813043-51812663 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 247
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 207, 218

Conread position: 309-669
Cow position: chr18:43175592-43175232 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 240
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 22, 35

Conread position: 317-686
Cow position: chr18:55523332-55523703 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 228
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 39

Conread position: 343-682
Cow position: chr18:51873669-51874005 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 218
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 67, 27

Conread position: 356-675
Cow position: chr18:40306148-40306467 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 204
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 358-678
Cow position: chr18:50049246-50048923 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 221
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 73, 172

Conread position: 359-674
Cow position: chr18:52012459-52012146 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 74, 12

Conread position: 359-681
Cow position: chr18:55017778-55018100 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 205
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 158, 144

Conread position: 363-682
Cow position: chr18:42827390-42827709 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 364-682
Cow position: chr18:43048741-43048423 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 367-679
Cow position: chr18:54992726-54993038 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 194
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 371-585
Cow position: chr18:51969018-51969231 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 12

Conread position: 376-675
Cow position: chr18:53636129-53635830 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 193
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 124, 150

Conread position: 380-646
Cow position: chr18:43053456-43053190 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 173
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 217, 207

Conread position: 383-669
Cow position: chr18:50059701-50059415 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 390-681
Cow position: chr18:56248225-56247939 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 34

Conread position: 429-683
Cow position: chr18:41949380-41949126 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 449-696
Cow position: chr18:51766093-51765845 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 15

Conread position: 463-669
Cow position: chr18:43053457-43053251 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.