Cow genome map

Conread name: Ss1.1-rsug17_g7.5

Conread position: 1-660
Cow position:
Alignm length: 664
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 263

Conread position: 1-681
Cow position:
Alignm length: 685
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 179

Conread position: 1-684
Cow position:
Alignm length: 686
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 264

Conread position: 2-451
Cow position:
Alignm length: 454
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 94

Conread position: 2-670
Cow position:
Alignm length: 674
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 42

Conread position: 2-677
Cow position:
Alignm length: 678
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 86

Conread position: 3-636
Cow position:
Alignm length: 640
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 8

Conread position: 3-677
Cow position:
Alignm length: 676
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 4-664
Cow position:
Alignm length: 664
Alignm identity: 384
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 27, 32

Conread position: 4-682
Cow position:
Alignm length: 680
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 368

Conread position: 5-678
Cow position:
Alignm length: 676
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 48

Conread position: 5-686
Cow position:
Alignm length: 685
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 33

Conread position: 9-375
Cow position:
Alignm length: 369
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 86

Conread position: 10-682
Cow position:
Alignm length: 676
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 45

Conread position: 11-624
Cow position:
Alignm length: 615
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 560, 555

Conread position: 11-669
Cow position:
Alignm length: 662
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 69

Conread position: 11-669
Cow position:
Alignm length: 664
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 158

Conread position: 11-673
Cow position:
Alignm length: 669
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 181

Conread position: 11-681
Cow position:
Alignm length: 676
Alignm identity: 406
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 170, 152

Conread position: 11-686
Cow position:
Alignm length: 678
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 160

Conread position: 13-670
Cow position:
Alignm length: 670
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 101

Conread position: 13-682
Cow position:
Alignm length: 671
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 415, 421

Conread position: 20-408
Cow position:
Alignm length: 391
Alignm identity: 252
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 316, 83

Conread position: 22-669
Cow position:
Alignm length: 649
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 223

Conread position: 22-670
Cow position:
Alignm length: 658
Alignm identity: 394
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 161, 140

Conread position: 23-669
Cow position:
Alignm length: 652
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 253

Conread position: 26-669
Cow position:
Alignm length: 645
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 382, 197

Conread position: 41-682
Cow position:
Alignm length: 645
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 142

Conread position: 54-678
Cow position:
Alignm length: 628
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 214

Conread position: 63-664
Cow position:
Alignm length: 606
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 17

Conread position: 68-674
Cow position:
Alignm length: 607
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 83-681
Cow position:
Alignm length: 602
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 254

Conread position: 107-670
Cow position:
Alignm length: 566
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 55

Conread position: 131-558
Cow position:
Alignm length: 431
Alignm identity: 266
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 9, 55

Conread position: 190-682
Cow position:
Alignm length: 495
Alignm identity: 304
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 184, 189

Conread position: 226-686
Cow position:
Alignm length: 463
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 188

Conread position: 232-681
Cow position:
Alignm length: 452
Alignm identity: 272
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 267, 274

Conread position: 291-670
Cow position:
Alignm length: 381
Alignm identity: 226
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 129

Conread position: 297-678
Cow position:
Alignm length: 383
Alignm identity: 236
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 283, 294

Conread position: 467-673
Cow position:
Alignm length: 207
Alignm identity: 139
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 65, 0

Show alignments to all cow chromosomes.