Cow genome map
| Conread name: | Ss1.1-rsug17_g7.5 |
| Conread position: | 1-533 |
| Cow position: | chr21:12608468-12607936 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 320 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 90, 82 |
| Conread position: | 1-674 |
| Cow position: | chr21:12608888-12608216 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 403 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 176, 170 |
| Conread position: | 4-678 |
| Cow position: | chr21:12608633-12607959 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 93 |
| Conread position: | 5-677 |
| Cow position: | chr21:12658878-12659550 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 19 |
| Conread position: | 12-674 |
| Cow position: | chr21:12659137-12659799 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 393 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 83, 87 |
| Conread position: | 12-676 |
| Cow position: | chr21:12659053-12659717 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 12 |
| Conread position: | 12-681 |
| Cow position: | chr21:12659305-12659974 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 397 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 241, 255 |
| Conread position: | 13-418 |
| Cow position: | chr21:34222998-34222593 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 267 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 90, 67 |
| Conread position: | 13-646 |
| Cow position: | chr21:12659390-12660024 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 368 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 6, 11 |
| Conread position: | 13-681 |
| Cow position: | chr21:12608708-12608040 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 82 |
| Conread position: | 23-552 |
| Cow position: | chr21:34223072-34222543 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 328 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 154, 148 |
| Conread position: | 23-603 |
| Cow position: | chr21:12608530-12607950 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 348 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 154, 147 |
| Conread position: | 29-386 |
| Cow position: | chr21:34222898-34222541 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 238 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 243, 234 |
| Conread position: | 41-674 |
| Cow position: | chr21:12658830-12659463 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 55 |
| Conread position: | 65-586 |
| Cow position: | chr21:12608908-12608387 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 322 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 115, 124 |
| Conread position: | 107-686 |
| Cow position: | chr21:34223153-34222577 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 42 |
| Conread position: | 125-684 |
| Cow position: | chr21:12658830-12659389 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 143 |
| Conread position: | 142-670 |
| Cow position: | chr21:12608915-12608387 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 311 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 194-681 |
| Cow position: | chr21:12658815-12659302 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 282 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 233-690 |
| Cow position: | chr21:12608908-12608451 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 281 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 295, 282 |
Show alignments to all cow chromosomes.