Cow genome map

Conread name: Ss1.1-rsug17_g7.5

Conread position: 1-540
Cow position:
Alignm length: 540
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-644
Cow position:
Alignm length: 645
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 419

Conread position: 2-397
Cow position:
Alignm length: 396
Alignm identity: 233
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 381, 0

Conread position: 2-681
Cow position:
Alignm length: 681
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 160

Conread position: 2-683
Cow position:
Alignm length: 684
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 412

Conread position: 4-673
Cow position:
Alignm length: 673
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 259

Conread position: 4-683
Cow position:
Alignm length: 681
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 331

Conread position: 9-565
Cow position:
Alignm length: 557
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 542, 0

Conread position: 9-640
Cow position:
Alignm length: 634
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 240

Conread position: 9-665
Cow position:
Alignm length: 660
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 54

Conread position: 9-669
Cow position:
Alignm length: 662
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 586, 582

Conread position: 13-238
Cow position:
Alignm length: 226
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 202, 0

Conread position: 14-670
Cow position:
Alignm length: 657
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 21-683
Cow position:
Alignm length: 663
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-413
Cow position:
Alignm length: 393
Alignm identity: 257
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 254, 247

Conread position: 22-682
Cow position:
Alignm length: 662
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 492, 482

Conread position: 23-681
Cow position:
Alignm length: 660
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 499, 505

Conread position: 23-686
Cow position:
Alignm length: 666
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 64

Conread position: 23-686
Cow position:
Alignm length: 668
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 235

Conread position: 27-402
Cow position:
Alignm length: 377
Alignm identity: 234
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 165, 154

Conread position: 41-669
Cow position:
Alignm length: 630
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 47

Conread position: 44-686
Cow position:
Alignm length: 645
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 392

Conread position: 70-519
Cow position:
Alignm length: 453
Alignm identity: 290
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 12, 38

Conread position: 85-683
Cow position:
Alignm length: 601
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 12

Conread position: 108-690
Cow position:
Alignm length: 583
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 111-684
Cow position:
Alignm length: 577
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 75

Conread position: 140-686
Cow position:
Alignm length: 548
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 27

Conread position: 213-566
Cow position:
Alignm length: 354
Alignm identity: 228
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 338, 0

Conread position: 267-690
Cow position:
Alignm length: 426
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 33

Conread position: 281-665
Cow position:
Alignm length: 386
Alignm identity: 253
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 285, 291

Conread position: 294-520
Cow position:
Alignm length: 227
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 381-668
Cow position:
Alignm length: 289
Alignm identity: 189
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 133, 147

Conread position: 449-681
Cow position:
Alignm length: 233
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 479-683
Cow position:
Alignm length: 206
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 109, 115

Show alignments to all cow chromosomes.