Cow genome map
| Conread name: | Ss1.1-rsug17_g7.5 |
| Conread position: | 1-540 |
| Cow position: | chr24:17078052-17077513 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-644 |
| Cow position: | chr24:17070416-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 428, 419 |
| Conread position: | 2-397 |
| Cow position: | chr24:17035328-17034934 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 381, 0 |
| Conread position: | 2-681 |
| Cow position: | chr24:17036084-17035405 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 160 |
| Conread position: | 2-683 |
| Cow position: | chr24:17036000-17035319 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 427, 412 |
| Conread position: | 4-673 |
| Cow position: | chr24:17035747-17035077 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 259 |
| Conread position: | 4-683 |
| Cow position: | chr24:17078217-17077538 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 331 |
| Conread position: | 9-565 |
| Cow position: | chr24:17035489-17034934 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 542, 0 |
| Conread position: | 9-640 |
| Cow position: | chr24:17035657-17035026 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 240 |
| Conread position: | 9-665 |
| Cow position: | chr24:17036245-17035589 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 54 |
| Conread position: | 9-669 |
| Cow position: | chr24:17036413-17035753 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 586, 582 |
| Conread position: | 13-238 |
| Cow position: | chr24:17013301-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 202, 0 |
| Conread position: | 14-670 |
| Cow position: | chr24:17078291-17077635 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-683 |
| Cow position: | chr24:17036149-17035487 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-413 |
| Cow position: | chr24:17077863-17077473 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 254, 247 |
| Conread position: | 22-682 |
| Cow position: | chr24:17036316-17035656 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 492, 482 |
| Conread position: | 23-681 |
| Cow position: | chr24:17078114-17077457 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 499, 505 |
| Conread position: | 23-686 |
| Cow position: | chr24:17035895-17035232 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 64 |
| Conread position: | 23-686 |
| Cow position: | chr24:17036483-17035820 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 235 |
| Conread position: | 27-402 |
| Cow position: | chr24:17013147-17013521 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 165, 154 |
| Conread position: | 41-669 |
| Cow position: | chr24:17035793-17035165 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 47 |
| Conread position: | 44-686 |
| Cow position: | chr24:17036546-17035904 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 369, 392 |
| Conread position: | 70-519 |
| Cow position: | chr24:17013109-17013555 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 290 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 12, 38 |
| Conread position: | 85-683 |
| Cow position: | chr24:17070416-17071014 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 12 |
| Conread position: | 108-690 |
| Cow position: | chr24:17078365-17077783 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 111-684 |
| Cow position: | chr24:17070358-17070931 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 75 |
| Conread position: | 140-686 |
| Cow position: | chr24:17036615-17036072 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 213-566 |
| Cow position: | chr24:17013165-17013517 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 338, 0 |
| Conread position: | 267-690 |
| Cow position: | chr24:17036656-17036236 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 33 |
| Conread position: | 281-665 |
| Cow position: | chr24:17013149-17013532 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 253 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 285, 291 |
| Conread position: | 294-520 |
| Cow position: | chr24:16986428-16986654 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 381-668 |
| Cow position: | chr24:17013165-17013452 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 133, 147 |
| Conread position: | 449-681 |
| Cow position: | chr24:17013149-17013381 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 479-683 |
| Cow position: | chr24:16986445-16986649 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 109, 115 |
Show alignments to all cow chromosomes.