Cow genome map
| Conread name: | Ss1.1-rsug17_g7.5 |
| Conread position: | 1-221 |
| Cow position: | chr25:33128011-33128231 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-392 |
| Cow position: | chr25:36844579-36844197 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 226, 0 |
| Conread position: | 1-398 |
| Cow position: | chr25:36801584-36801977 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 100 |
| Conread position: | 1-543 |
| Cow position: | chr25:23420340-23420882 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 347, 359 |
| Conread position: | 1-552 |
| Cow position: | chr25:34447315-34447857 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 172 |
| Conread position: | 1-619 |
| Cow position: | chr25:33157348-33156731 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 353, 359 |
| Conread position: | 1-620 |
| Cow position: | chr25:33299276-33299888 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 182 |
| Conread position: | 1-655 |
| Cow position: | chr25:34769831-34769179 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 602, 607 |
| Conread position: | 1-670 |
| Cow position: | chr25:25652481-25653150 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 386 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 171, 182 |
| Conread position: | 1-671 |
| Cow position: | chr25:25652649-25653319 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 387 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 13, 8 |
| Conread position: | 1-677 |
| Cow position: | chr25:33298940-33299616 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-682 |
| Cow position: | chr25:33298772-33299453 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 354, 359 |
| Conread position: | 1-682 |
| Cow position: | chr25:36800924-36801593 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 0 |
| Conread position: | 1-684 |
| Cow position: | chr25:33298688-33299371 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 13 |
| Conread position: | 1-684 |
| Cow position: | chr25:33298856-33299539 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 625 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-684 |
| Cow position: | chr25:36800588-36801271 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-691 |
| Cow position: | chr25:33298520-33299210 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 262 |
| Conread position: | 2-374 |
| Cow position: | chr25:33145056-33145428 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 82, 89 |
| Conread position: | 2-374 |
| Cow position: | chr25:34763372-34763741 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 129, 82 |
| Conread position: | 2-412 |
| Cow position: | chr25:34714160-34714566 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 105, 99 |
| Conread position: | 2-418 |
| Cow position: | chr25:34714076-34714492 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 338, 333 |
| Conread position: | 2-519 |
| Cow position: | chr25:33305360-33304849 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 42 |
| Conread position: | 2-663 |
| Cow position: | chr25:36800841-36801490 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 190 |
| Conread position: | 2-669 |
| Cow position: | chr25:34732566-34731899 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 87 |
| Conread position: | 2-682 |
| Cow position: | chr25:326539-327225 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 166 |
| Conread position: | 2-682 |
| Cow position: | chr25:34763039-34763713 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 81 |
| Conread position: | 4-245 |
| Cow position: | chr25:33305674-33305432 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 4-675 |
| Cow position: | chr25:34433568-34434221 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 405 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 194, 34 |
| Conread position: | 4-682 |
| Cow position: | chr25:34446982-34447660 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 175 |
| Conread position: | 4-690 |
| Cow position: | chr25:326457-327149 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 457, 485 |
| Conread position: | 5-663 |
| Cow position: | chr25:36800676-36801334 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 350 |
| Conread position: | 9-389 |
| Cow position: | chr25:33127851-33128231 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 246 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-502 |
| Cow position: | chr25:18642206-18641701 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 307 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 137, 183 |
| Conread position: | 9-663 |
| Cow position: | chr25:36801340-36801990 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 160 |
| Conread position: | 9-665 |
| Cow position: | chr25:33157424-33156768 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 499, 494 |
| Conread position: | 9-668 |
| Cow position: | chr25:34732307-34731649 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 388 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 83, 90 |
| Conread position: | 9-682 |
| Cow position: | chr25:36801184-36801845 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 89 |
| Conread position: | 9-684 |
| Cow position: | chr25:33299116-33299791 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 92 |
| Conread position: | 9-684 |
| Cow position: | chr25:33306332-33305666 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 45 |
| Conread position: | 9-694 |
| Cow position: | chr25:34447071-34447754 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 176 |
| Conread position: | 11-302 |
| Cow position: | chr25:326974-327265 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 96, 84 |
| Conread position: | 11-660 |
| Cow position: | chr25:34732473-34731824 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 392 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 231, 254 |
| Conread position: | 12-243 |
| Cow position: | chr25:366777-367008 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-373 |
| Cow position: | chr25:346500-346861 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 134, 140 |
| Conread position: | 12-540 |
| Cow position: | chr25:33144901-33145426 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 137 |
| Conread position: | 12-540 |
| Cow position: | chr25:34763214-34763739 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 319 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 12-580 |
| Cow position: | chr25:34762881-34763446 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 343 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 240, 0 |
| Conread position: | 12-636 |
| Cow position: | chr25:326633-327263 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 6 |
| Conread position: | 12-677 |
| Cow position: | chr25:25652576-25653241 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 393 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 82, 87 |
| Conread position: | 12-686 |
| Cow position: | chr25:33157505-33156831 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 324 |
| Conread position: | 13-457 |
| Cow position: | chr25:34763299-34763740 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 278 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 247, 148 |
| Conread position: | 13-677 |
| Cow position: | chr25:34762966-34763624 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 150 |
| Conread position: | 13-682 |
| Cow position: | chr25:33299036-33299705 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-682 |
| Cow position: | chr25:36801104-36801761 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 11 |
| Conread position: | 13-685 |
| Cow position: | chr25:36800768-36801428 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 81 |
| Conread position: | 13-686 |
| Cow position: | chr25:33299204-33299870 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 613, 0 |
| Conread position: | 13-686 |
| Cow position: | chr25:34769987-34769314 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 170 |
| Conread position: | 20-670 |
| Cow position: | chr25:25652416-25653066 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 376 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 172, 167 |
| Conread position: | 21-579 |
| Cow position: | chr25:34433501-34434050 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 335 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 148, 105 |
| Conread position: | 21-686 |
| Cow position: | chr25:34770147-34769482 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 23 |
| Conread position: | 22-446 |
| Cow position: | chr25:22235891-22236315 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 82 |
| Conread position: | 22-689 |
| Cow position: | chr25:34770062-34769395 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-624 |
| Cow position: | chr25:34763141-34763739 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 313 |
| Conread position: | 23-659 |
| Cow position: | chr25:33306068-33305438 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 123 |
| Conread position: | 23-670 |
| Cow position: | chr25:25652251-25652898 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 380 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 83, 72 |
| Conread position: | 23-676 |
| Cow position: | chr25:33298626-33299279 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 155 |
| Conread position: | 23-682 |
| Cow position: | chr25:23420125-23420769 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 45 |
| Conread position: | 23-682 |
| Cow position: | chr25:33306156-33305500 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 211 |
| Conread position: | 23-685 |
| Cow position: | chr25:326392-327061 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 88 |
| Conread position: | 25-683 |
| Cow position: | chr25:33306397-33305747 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 55 |
| Conread position: | 27-367 |
| Cow position: | chr25:366708-367048 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 203, 209 |
| Conread position: | 27-390 |
| Cow position: | chr25:346431-346794 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 203, 210 |
| Conread position: | 27-663 |
| Cow position: | chr25:36800530-36801166 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-670 |
| Cow position: | chr25:34713849-34714492 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 421, 437 |
| Conread position: | 35-592 |
| Cow position: | chr25:33305971-33305422 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 331, 27 |
| Conread position: | 35-671 |
| Cow position: | chr25:33298470-33299106 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 230 |
| Conread position: | 41-473 |
| Cow position: | chr25:33127799-33128231 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 41-624 |
| Cow position: | chr25:33144846-33145426 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 192 |
| Conread position: | 41-676 |
| Cow position: | chr25:34732611-34731976 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 385 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 143, 131 |
| Conread position: | 41-686 |
| Cow position: | chr25:36800382-36801021 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 59 |
| Conread position: | 43-663 |
| Cow position: | chr25:34446937-34447557 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 43-673 |
| Cow position: | chr25:34762828-34763455 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 129 |
| Conread position: | 44-681 |
| Cow position: | chr25:36800463-36801100 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 52 |
| Conread position: | 45-243 |
| Cow position: | chr25:427330-427528 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 63-669 |
| Cow position: | chr25:34713801-34714407 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 353 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 45, 40 |
| Conread position: | 64-386 |
| Cow position: | chr25:326942-327265 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 6, 28 |
| Conread position: | 64-624 |
| Cow position: | chr25:23420319-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 108 |
| Conread position: | 65-540 |
| Cow position: | chr25:33127739-33128214 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 68-550 |
| Cow position: | chr25:326353-326837 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 96 |
| Conread position: | 74-671 |
| Cow position: | chr25:33306679-33306096 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 381 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 165, 44 |
| Conread position: | 89-686 |
| Cow position: | chr25:34770164-34769566 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 98-408 |
| Cow position: | chr25:18642201-18641888 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 74, 87 |
| Conread position: | 98-563 |
| Cow position: | chr25:34432990-34433473 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 236, 347 |
| Conread position: | 106-684 |
| Cow position: | chr25:36801353-36801931 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-456 |
| Cow position: | chr25:366704-367053 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 207, 213 |
| Conread position: | 107-663 |
| Cow position: | chr25:34433503-34434051 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 339 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 138, 104 |
| Conread position: | 107-686 |
| Cow position: | chr25:33305421-33304850 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 18 |
| Conread position: | 110-560 |
| Cow position: | chr25:36844638-36844197 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 47, 54 |
| Conread position: | 112-672 |
| Cow position: | chr25:33144833-33145390 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 153 |
| Conread position: | 119-681 |
| Cow position: | chr25:33298470-33299032 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-552 |
| Cow position: | chr25:34732615-34732184 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 51 |
| Conread position: | 125-675 |
| Cow position: | chr25:3663928-3664478 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 311 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 130-470 |
| Cow position: | chr25:326925-327265 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 227 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 52, 42 |
| Conread position: | 130-625 |
| Cow position: | chr25:326331-326826 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 302 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 145, 136 |
| Conread position: | 131-638 |
| Cow position: | chr25:22235831-22236339 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 317 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 9, 55 |
| Conread position: | 132-682 |
| Cow position: | chr25:34446941-34447492 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 137-682 |
| Cow position: | chr25:34762838-34763380 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 327 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 277, 0 |
| Conread position: | 139-418 |
| Cow position: | chr25:414763-414490 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 114, 13 |
| Conread position: | 139-540 |
| Cow position: | chr25:346459-346860 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 250 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 175, 181 |
| Conread position: | 143-634 |
| Cow position: | chr25:33127733-33128224 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 149-675 |
| Cow position: | chr25:23420320-23420846 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 114 |
| Conread position: | 155-682 |
| Cow position: | chr25:33127661-33128188 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 33 |
| Conread position: | 176-515 |
| Cow position: | chr25:18642207-18641865 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 187-670 |
| Cow position: | chr25:34433499-34433976 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 299 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 159, 103 |
| Conread position: | 191-669 |
| Cow position: | chr25:34713845-34714323 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 175, 181 |
| Conread position: | 199-681 |
| Cow position: | chr25:22235816-22236298 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 302 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 29, 8 |
| Conread position: | 203-684 |
| Cow position: | chr25:33298470-33298951 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 54 |
| Conread position: | 209-675 |
| Cow position: | chr25:33144846-33145309 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 192 |
| Conread position: | 212-541 |
| Cow position: | chr25:366725-367054 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 117, 128 |
| Conread position: | 212-669 |
| Cow position: | chr25:34433020-34433495 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 203, 353 |
| Conread position: | 212-682 |
| Cow position: | chr25:34446938-34447408 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 148 |
| Conread position: | 213-682 |
| Cow position: | chr25:326330-326799 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 289 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 113, 125 |
| Conread position: | 225-505 |
| Cow position: | chr25:414761-414487 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 225-624 |
| Cow position: | chr25:346461-346860 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 116, 110 |
| Conread position: | 231-682 |
| Cow position: | chr25:34446873-34447324 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 49, 81 |
| Conread position: | 259-580 |
| Cow position: | chr25:18642208-18641883 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 139, 251 |
| Conread position: | 274-669 |
| Cow position: | chr25:34433502-34433894 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 141, 105 |
| Conread position: | 275-691 |
| Cow position: | chr25:34713845-34714261 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 181, 171 |
| Conread position: | 291-642 |
| Cow position: | chr25:346443-346794 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 191, 197 |
| Conread position: | 293-676 |
| Cow position: | chr25:33144846-33145226 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 298, 192 |
| Conread position: | 295-625 |
| Cow position: | chr25:366724-367054 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 187, 193 |
| Conread position: | 296-496 |
| Cow position: | chr25:34433020-34433220 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 297-520 |
| Cow position: | chr25:427330-427553 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 202, 208 |
| Conread position: | 298-668 |
| Cow position: | chr25:34762750-34763117 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 42 |
| Conread position: | 309-579 |
| Cow position: | chr25:414761-414497 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 202, 9 |
| Conread position: | 323-683 |
| Cow position: | chr25:33127661-33128021 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 358-683 |
| Cow position: | chr25:18642193-18641865 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 69, 92 |
| Conread position: | 361-642 |
| Cow position: | chr25:36844639-36844358 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 78, 84 |
| Conread position: | 363-680 |
| Cow position: | chr25:346431-346748 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 363-681 |
| Cow position: | chr25:366708-367026 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 399-677 |
| Cow position: | chr25:34713801-34714079 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 224, 215 |
| Conread position: | 466-668 |
| Cow position: | chr25:34433022-34433224 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 517-682 |
| Cow position: | chr25:34432989-34433154 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.