Cow genome map
| Conread name: | Ss1.1-rsug17_g7.5 |
| Conread position: | 1-681 |
| Cow position: | chr6:49340361-49341041 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 263 |
| Conread position: | 2-231 |
| Cow position: | chr6:49341202-49341431 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 175, 160 |
| Conread position: | 2-677 |
| Cow position: | chr6:49428522-49429197 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 388 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 15, 22 |
| Conread position: | 4-686 |
| Cow position: | chr6:49396253-49396935 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 344, 354 |
| Conread position: | 12-552 |
| Cow position: | chr6:49428952-49429492 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 318 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 13, 6 |
| Conread position: | 15-663 |
| Cow position: | chr6:49428620-49429267 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 378 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 79, 8 |
| Conread position: | 22-520 |
| Cow position: | chr6:49340970-49341466 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 66 |
| Conread position: | 22-670 |
| Cow position: | chr6:49340718-49341366 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 411, 404 |
| Conread position: | 22-680 |
| Cow position: | chr6:49340466-49341124 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 245 |
| Conread position: | 23-559 |
| Cow position: | chr6:49396440-49396976 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 335 |
| Conread position: | 23-663 |
| Cow position: | chr6:49340803-49341443 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 66 |
| Conread position: | 23-663 |
| Cow position: | chr6:49396356-49396996 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 159 |
| Conread position: | 23-673 |
| Cow position: | chr6:49340635-49341285 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 237 |
| Conread position: | 23-682 |
| Cow position: | chr6:49340551-49341210 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 241 |
| Conread position: | 23-686 |
| Cow position: | chr6:49428879-49429540 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 388 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 77, 68 |
| Conread position: | 34-677 |
| Cow position: | chr6:49395871-49396506 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 390 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 218, 12 |
| Conread position: | 41-676 |
| Cow position: | chr6:49428729-49429364 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 371 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 46, 66 |
| Conread position: | 59-677 |
| Cow position: | chr6:49428243-49428861 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 357 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 294, 301 |
| Conread position: | 68-670 |
| Cow position: | chr6:49396155-49396751 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 21 |
| Conread position: | 68-682 |
| Cow position: | chr6:49396233-49396847 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 207 |
| Conread position: | 83-673 |
| Cow position: | chr6:49340359-49340949 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-565 |
| Cow position: | chr6:49362402-49362848 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 77, 65 |
| Conread position: | 107-677 |
| Cow position: | chr6:49340062-49340617 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 360 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 22, 13 |
Show alignments to all cow chromosomes.