Cow genome map

Conread name: Ss1.1-rsug17_g7.5

Conread position: 1-289
Cow position:
Alignm length: 289
Alignm identity: 189
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-660
Cow position:
Alignm length: 662
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 354

Conread position: 1-666
Cow position:
Alignm length: 667
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 256

Conread position: 1-669
Cow position:
Alignm length: 671
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 155

Conread position: 1-682
Cow position:
Alignm length: 682
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-418
Cow position:
Alignm length: 419
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 192

Conread position: 2-671
Cow position:
Alignm length: 672
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 94

Conread position: 2-678
Cow position:
Alignm length: 677
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 669, 0

Conread position: 2-682
Cow position:
Alignm length: 682
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 78

Conread position: 3-683
Cow position:
Alignm length: 681
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-683
Cow position:
Alignm length: 682
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 156

Conread position: 4-677
Cow position:
Alignm length: 682
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 183

Conread position: 4-682
Cow position:
Alignm length: 680
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 494, 506

Conread position: 5-670
Cow position:
Alignm length: 667
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 331

Conread position: 5-675
Cow position:
Alignm length: 673
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 424

Conread position: 5-682
Cow position:
Alignm length: 678
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 8-690
Cow position:
Alignm length: 686
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 427

Conread position: 9-682
Cow position:
Alignm length: 676
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 349

Conread position: 11-670
Cow position:
Alignm length: 661
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 324

Conread position: 12-659
Cow position:
Alignm length: 652
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 75

Conread position: 13-682
Cow position:
Alignm length: 675
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 36

Conread position: 14-682
Cow position:
Alignm length: 672
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 243

Conread position: 14-682
Cow position:
Alignm length: 671
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 60

Conread position: 21-540
Cow position:
Alignm length: 521
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 255

Conread position: 21-669
Cow position:
Alignm length: 650
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 398

Conread position: 21-670
Cow position:
Alignm length: 653
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 491, 482

Conread position: 21-670
Cow position:
Alignm length: 651
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 149

Conread position: 21-676
Cow position:
Alignm length: 660
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 78

Conread position: 22-655
Cow position:
Alignm length: 637
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 82

Conread position: 22-689
Cow position:
Alignm length: 674
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 320

Conread position: 23-373
Cow position:
Alignm length: 351
Alignm identity: 220
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 23-682
Cow position:
Alignm length: 661
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 73

Conread position: 27-682
Cow position:
Alignm length: 658
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 501, 476

Conread position: 28-686
Cow position:
Alignm length: 661
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 155

Conread position: 46-682
Cow position:
Alignm length: 637
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 64-683
Cow position:
Alignm length: 622
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 94

Conread position: 65-544
Cow position:
Alignm length: 483
Alignm identity: 297
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 290, 270

Conread position: 123-669
Cow position:
Alignm length: 548
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 35

Conread position: 139-675
Cow position:
Alignm length: 538
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 28

Conread position: 268-682
Cow position:
Alignm length: 418
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 67

Conread position: 282-682
Cow position:
Alignm length: 403
Alignm identity: 259
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 17, 26

Conread position: 295-686
Cow position:
Alignm length: 395
Alignm identity: 244
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 98

Show alignments to all cow chromosomes.