Cow genome map
| Conread name: | Ss1.1-rtes03_e2.5 |
| Conread position: | 1-438 |
| Cow position: | chr13:39984462-39984899 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-699 |
| Cow position: | chr13:39984126-39984824 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 228 |
| Conread position: | 3-653 |
| Cow position: | chr13:39984044-39984694 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 13 |
| Conread position: | 3-683 |
| Cow position: | chr13:39984212-39984892 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 13 |
| Conread position: | 4-522 |
| Cow position: | chr13:39984381-39984899 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 325 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 73, 80 |
| Conread position: | 12-343 |
| Cow position: | chr13:56292129-56291797 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 56, 78 |
| Conread position: | 12-570 |
| Cow position: | chr13:56333701-56334268 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 357 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 50, 78 |
| Conread position: | 16-699 |
| Cow position: | chr13:39983973-39984656 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 285 |
| Conread position: | 17-573 |
| Cow position: | chr13:22125339-22125895 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 324 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 52, 66 |
| Conread position: | 21-574 |
| Cow position: | chr13:24162816-24163370 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 341 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 9, 162 |
| Conread position: | 21-640 |
| Cow position: | chr13:22125007-22125626 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 84 |
| Conread position: | 21-640 |
| Cow position: | chr13:24162733-24163352 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 73 |
| Conread position: | 23-574 |
| Cow position: | chr13:22125095-22125644 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 335 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 172, 7 |
| Conread position: | 27-477 |
| Cow position: | chr13:56292271-56291831 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 41, 63 |
| Conread position: | 31-520 |
| Cow position: | chr13:22125437-22125926 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 290 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 40, 52 |
| Conread position: | 34-433 |
| Cow position: | chr13:56292188-56291791 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 201, 35 |
| Conread position: | 38-646 |
| Cow position: | chr13:56292434-56291831 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 378 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 44, 39 |
| Conread position: | 44-692 |
| Cow position: | chr13:56292512-56291869 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 396 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 27, 36 |
| Conread position: | 52-699 |
| Cow position: | chr13:39983841-39984488 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 394 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 27, 21 |
| Conread position: | 88-678 |
| Cow position: | chr13:56333693-56334292 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 369 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 109, 122 |
| Conread position: | 351-708 |
| Cow position: | chr13:56333704-56334060 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 98, 111 |
Show alignments to all cow chromosomes.