Cow genome map

Conread name: Ss1.1-rtes03_e2.5

Conread position: 2-388
Cow position:
Alignm length: 389
Alignm identity: 251
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 164, 159

Conread position: 2-568
Cow position:
Alignm length: 572
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 148

Conread position: 2-731
Cow position:
Alignm length: 739
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 163

Conread position: 3-543
Cow position:
Alignm length: 543
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 154

Conread position: 4-699
Cow position:
Alignm length: 700
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 414, 408

Conread position: 5-533
Cow position:
Alignm length: 534
Alignm identity: 331
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 72, 84

Conread position: 12-472
Cow position:
Alignm length: 465
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 221

Conread position: 12-615
Cow position:
Alignm length: 608
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 149

Conread position: 12-700
Cow position:
Alignm length: 694
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 65

Conread position: 15-652
Cow position:
Alignm length: 641
Alignm identity: 382
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 62, 70

Conread position: 15-700
Cow position:
Alignm length: 689
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 62

Conread position: 16-564
Cow position:
Alignm length: 553
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 61

Conread position: 16-630
Cow position:
Alignm length: 621
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 71

Conread position: 16-670
Cow position:
Alignm length: 657
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 61

Conread position: 16-683
Cow position:
Alignm length: 670
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 401, 376

Conread position: 16-699
Cow position:
Alignm length: 688
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 145

Conread position: 16-699
Cow position:
Alignm length: 687
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 145

Conread position: 16-726
Cow position:
Alignm length: 719
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 61

Conread position: 17-323
Cow position:
Alignm length: 307
Alignm identity: 185
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 17-643
Cow position:
Alignm length: 631
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 144

Conread position: 17-699
Cow position:
Alignm length: 686
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 301

Conread position: 17-699
Cow position:
Alignm length: 686
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 66

Conread position: 17-699
Cow position:
Alignm length: 683
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-699
Cow position:
Alignm length: 688
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 60

Conread position: 17-731
Cow position:
Alignm length: 723
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 212

Conread position: 17-732
Cow position:
Alignm length: 723
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 144

Conread position: 17-732
Cow position:
Alignm length: 721
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 60

Conread position: 21-700
Cow position:
Alignm length: 683
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 394

Conread position: 25-272
Cow position:
Alignm length: 250
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 57

Conread position: 30-691
Cow position:
Alignm length: 663
Alignm identity: 388
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 49, 60

Conread position: 35-651
Cow position:
Alignm length: 622
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 199

Conread position: 38-699
Cow position:
Alignm length: 667
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 184

Conread position: 80-732
Cow position:
Alignm length: 659
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 81

Conread position: 81-702
Cow position:
Alignm length: 624
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 84

Conread position: 81-731
Cow position:
Alignm length: 658
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 331

Conread position: 115-692
Cow position:
Alignm length: 582
Alignm identity: 342
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 50

Conread position: 120-653
Cow position:
Alignm length: 537
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 282

Conread position: 247-731
Cow position:
Alignm length: 493
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 145

Conread position: 372-726
Cow position:
Alignm length: 359
Alignm identity: 224
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 33

Conread position: 451-693
Cow position:
Alignm length: 245
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 70

Show alignments to all cow chromosomes.