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Cow genome map

           
Conread name:
           
Ss1.1-rtes03_e2.5
        

               
Conread position:
               
1-315
               

               
Cow position:
               
chr18:51874370-51874684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
68, 72
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr18:43174958-43174497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
425, 409
               

               
Conread position:
               
1-534
               

               
Cow position:
               
chr18:44184488-44183955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 156
               

               
Conread position:
               
1-573
               

               
Cow position:
               
chr18:51839415-51838843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
333, 319
               

               
Conread position:
               
1-616
               

               
Cow position:
               
chr18:51765516-51764901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
1-653
               

               
Cow position:
               
chr18:51368456-51367805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
77, 83
               

               
Conread position:
               
1-669
               

               
Cow position:
               
chr18:51812570-51811904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
165, 160
               

               
Conread position:
               
1-669
               

               
Cow position:
               
chr18:51812654-51811986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 317
               

               
Conread position:
               
1-682
               

               
Cow position:
               
chr18:51789327-51788647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
165, 160
               

               
Conread position:
               
1-683
               

               
Cow position:
               
chr18:51789411-51788729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 317
               

               
Conread position:
               
1-698
               

               
Cow position:
               
chr18:51789495-51788798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 86
               

               
Conread position:
               
1-699
               

               
Cow position:
               
chr18:51789915-51789217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
1-732
               

               
Cow position:
               
chr18:53560072-53560803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
657
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr18:53555143-53554872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
2-291
               

               
Cow position:
               
chr18:53572041-53572318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr18:42959741-42959449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr18:56128940-56129231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
192, 0
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr18:53635225-53634917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
210, 192
               

               
Conread position:
               
2-374
               

               
Cow position:
               
chr18:44184319-44183947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
162, 156
               

               
Conread position:
               
2-402
               

               
Cow position:
               
chr18:43119924-43119524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 80
               

               
Conread position:
               
2-510
               

               
Cow position:
               
chr18:53560325-53560829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
449, 0
               

               
Conread position:
               
2-524
               

               
Cow position:
               
chr18:43168023-43168545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-567
               

               
Cow position:
               
chr18:50031003-50030436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 67
               

               
Conread position:
               
2-651
               

               
Cow position:
               
chr18:43120260-43119611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 72
               

               
Conread position:
               
2-651
               

               
Cow position:
               
chr18:44253828-44253192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 75
               

               
Conread position:
               
2-651
               

               
Cow position:
               
chr18:52427696-52428345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
408, 412
               

               
Conread position:
               
2-653
               

               
Cow position:
               
chr18:52446919-52447570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
163, 159
               

               
Conread position:
               
2-684
               

               
Cow position:
               
chr18:50059056-50058376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 81
               

               
Conread position:
               
2-690
               

               
Cow position:
               
chr18:33093043-33092361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 222
               

               
Conread position:
               
2-695
               

               
Cow position:
               
chr18:42985413-42984720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 71
               

               
Conread position:
               
2-695
               

               
Cow position:
               
chr18:52433045-52433738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
576, 592
               

               
Conread position:
               
2-699
               

               
Cow position:
               
chr18:50848482-50849179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
415, 410
               

               
Conread position:
               
2-702
               

               
Cow position:
               
chr18:44253660-44252974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 75
               

               
Conread position:
               
2-716
               

               
Cow position:
               
chr18:51839498-51838784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 83
               

               
Conread position:
               
2-724
               

               
Cow position:
               
chr18:51969086-51969790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
60, 86
               

               
Conread position:
               
2-732
               

               
Cow position:
               
chr18:41197554-41198287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 66
               

               
Conread position:
               
2-732
               

               
Cow position:
               
chr18:53559905-53560639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
550
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 346
               

               
Conread position:
               
3-365
               

               
Cow position:
               
chr18:42674753-42674391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
244, 221
               

               
Conread position:
               
3-455
               

               
Cow position:
               
chr18:41948780-41948327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
3-540
               

               
Cow position:
               
chr18:51752019-51751486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
75, 82
               

               
Conread position:
               
3-566
               

               
Cow position:
               
chr18:43120007-43119445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 161
               

               
Conread position:
               
3-617
               

               
Cow position:
               
chr18:40324400-40323790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 152
               

               
Conread position:
               
3-651
               

               
Cow position:
               
chr18:44240157-44240805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
3-653
               

               
Cow position:
               
chr18:53636064-53635414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 158
               

               
Conread position:
               
3-669
               

               
Cow position:
               
chr18:42960067-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 81
               

               
Conread position:
               
3-695
               

               
Cow position:
               
chr18:42985160-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 81
               

               
Conread position:
               
3-695
               

               
Cow position:
               
chr18:42985244-42984552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 81
               

               
Conread position:
               
3-695
               

               
Cow position:
               
chr18:43022923-43022231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 161
               

               
Conread position:
               
3-698
               

               
Cow position:
               
chr18:52428201-52428896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 159
               

               
Conread position:
               
3-698
               

               
Cow position:
               
chr18:52433382-52434077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 159
               

               
Conread position:
               
3-699
               

               
Cow position:
               
chr18:52447088-52447784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 149
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr18:14453139-14452870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-294
               

               
Cow position:
               
chr18:41198396-41198686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-294
               

               
Cow position:
               
chr18:43093101-43092812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
270, 0
               

               
Conread position:
               
4-395
               

               
Cow position:
               
chr18:50295505-50295895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
78, 69
               

               
Conread position:
               
4-399
               

               
Cow position:
               
chr18:50083851-50084246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-430
               

               
Cow position:
               
chr18:50048570-50048150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
290, 224
               

               
Conread position:
               
4-445
               

               
Cow position:
               
chr18:50099880-50100321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
56, 80
               

               
Conread position:
               
4-455
               

               
Cow position:
               
chr18:53498709-53499153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
58, 80
               

               
Conread position:
               
4-527
               

               
Cow position:
               
chr18:42744316-42743793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 253
               

               
Conread position:
               
4-561
               

               
Cow position:
               
chr18:52447845-52448403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
413, 408
               

               
Conread position:
               
4-611
               

               
Cow position:
               
chr18:44240242-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 76
               

               
Conread position:
               
4-617
               

               
Cow position:
               
chr18:43022586-43021973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 76
               

               
Conread position:
               
4-620
               

               
Cow position:
               
chr18:53525841-53526455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 80
               

               
Conread position:
               
4-626
               

               
Cow position:
               
chr18:44184569-44183947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 344
               

               
Conread position:
               
4-635
               

               
Cow position:
               
chr18:52428370-52429001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 72
               

               
Conread position:
               
4-635
               

               
Cow position:
               
chr18:52433551-52434182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 72
               

               
Conread position:
               
4-640
               

               
Cow position:
               
chr18:53509387-53510021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 86
               

               
Conread position:
               
4-643
               

               
Cow position:
               
chr18:44154302-44153670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 157
               

               
Conread position:
               
4-647
               

               
Cow position:
               
chr18:50099292-50099935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
4-651
               

               
Cow position:
               
chr18:44154134-44153506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 148
               

               
Conread position:
               
4-651
               

               
Cow position:
               
chr18:50848820-50849467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 79
               

               
Conread position:
               
4-653
               

               
Cow position:
               
chr18:52447173-52447822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 69
               

               
Conread position:
               
4-654
               

               
Cow position:
               
chr18:52428118-52428768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 241
               

               
Conread position:
               
4-654
               

               
Cow position:
               
chr18:52433299-52433949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 236
               

               
Conread position:
               
4-690
               

               
Cow position:
               
chr18:51813071-51812385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
4-695
               

               
Cow position:
               
chr18:43175375-43174684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 80
               

               
Conread position:
               
4-695
               

               
Cow position:
               
chr18:52427782-52428473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 73
               

               
Conread position:
               
4-695
               

               
Cow position:
               
chr18:52427950-52428641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 73
               

               
Conread position:
               
4-695
               

               
Cow position:
               
chr18:52433131-52433822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 73
               

               
Conread position:
               
4-695
               

               
Cow position:
               
chr18:52433215-52433906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 319
               

               
Conread position:
               
4-698
               

               
Cow position:
               
chr18:52447593-52448287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 148
               

               
Conread position:
               
4-699
               

               
Cow position:
               
chr18:33064537-33063842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 86
               

               
Conread position:
               
4-699
               

               
Cow position:
               
chr18:41197808-41198503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 69
               

               
Conread position:
               
4-699
               

               
Cow position:
               
chr18:50049074-50048379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
4-700
               

               
Cow position:
               
chr18:54967268-54967961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 63
               

               
Conread position:
               
4-700
               

               
Cow position:
               
chr18:54979793-54980489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 63
               

               
Conread position:
               
4-701
               

               
Cow position:
               
chr18:53586598-53585900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
348, 344
               

               
Conread position:
               
4-708
               

               
Cow position:
               
chr18:43167857-43168561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 201
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr18:42837366-42837096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
237, 229
               

               
Conread position:
               
5-306
               

               
Cow position:
               
chr18:54968272-54968574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
159, 150
               

               
Conread position:
               
5-357
               

               
Cow position:
               
chr18:14453222-14452870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
246, 252
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr18:55018534-55018907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 60
               

               
Conread position:
               
5-459
               

               
Cow position:
               
chr18:33064032-33063577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 158
               

               
Conread position:
               
5-532
               

               
Cow position:
               
chr18:51400598-51401125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 71
               

               
Conread position:
               
5-615
               

               
Cow position:
               
chr18:42724522-42723910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
549, 544
               

               
Conread position:
               
5-651
               

               
Cow position:
               
chr18:51969323-51969958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 146
               

               
Conread position:
               
5-675
               

               
Cow position:
               
chr18:41948946-41948278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 235
               

               
Conread position:
               
5-678
               

               
Cow position:
               
chr18:40086954-40086279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
5-692
               

               
Cow position:
               
chr18:56316115-56316802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 407
               

               
Conread position:
               
5-695
               

               
Cow position:
               
chr18:43023005-43022315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 72
               

               
Conread position:
               
5-695
               

               
Cow position:
               
chr18:51765932-51765242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 71
               

               
Conread position:
               
5-695
               

               
Cow position:
               
chr18:52012293-52011603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 115
               

               
Conread position:
               
5-699
               

               
Cow position:
               
chr18:51368200-51367507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 156
               

               
Conread position:
               
5-699
               

               
Cow position:
               
chr18:51765680-51764986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 61
               

               
Conread position:
               
5-700
               

               
Cow position:
               
chr18:54979458-54980153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 146
               

               
Conread position:
               
5-726
               

               
Cow position:
               
chr18:54979626-54980351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 76
               

               
Conread position:
               
5-730
               

               
Cow position:
               
chr18:55523458-55524187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
658, 664
               

               
Conread position:
               
5-732
               

               
Cow position:
               
chr18:54992718-54993448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
405, 391
               

               
Conread position:
               
5-732
               

               
Cow position:
               
chr18:55008541-55009272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 335
               

               
Conread position:
               
6-732
               

               
Cow position:
               
chr18:54966850-54967579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
346, 342
               

               
Conread position:
               
9-690
               

               
Cow position:
               
chr18:51400434-51401115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 64
               

               
Conread position:
               
9-726
               

               
Cow position:
               
chr18:53509223-53509945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 82
               

               
Conread position:
               
9-732
               

               
Cow position:
               
chr18:53525677-53526405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 82
               

               
Conread position:
               
10-653
               

               
Cow position:
               
chr18:56330116-56329473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
408, 398
               

               
Conread position:
               
11-197
               

               
Cow position:
               
chr18:40075515-40075701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-398
               

               
Cow position:
               
chr18:50271785-50272171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
234, 217
               

               
Conread position:
               
11-474
               

               
Cow position:
               
chr18:49032554-49032091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 67
               

               
Conread position:
               
11-484
               

               
Cow position:
               
chr18:50848995-50849468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
70, 66
               

               
Conread position:
               
11-617
               

               
Cow position:
               
chr18:50246233-50246839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 64
               

               
Conread position:
               
11-632
               

               
Cow position:
               
chr18:52012119-52011495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
453, 457
               

               
Conread position:
               
11-655
               

               
Cow position:
               
chr18:50099215-50099859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 62
               

               
Conread position:
               
11-681
               

               
Cow position:
               
chr18:50099383-50100056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 56
               

               
Conread position:
               
11-692
               

               
Cow position:
               
chr18:56329779-56329098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 214
               

               
Conread position:
               
11-695
               

               
Cow position:
               
chr18:49032890-49032206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 213
               

               
Conread position:
               
11-695
               

               
Cow position:
               
chr18:52428041-52428725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 315
               

               
Conread position:
               
11-699
               

               
Cow position:
               
chr18:50022163-50021469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 66
               

               
Conread position:
               
11-699
               

               
Cow position:
               
chr18:52428293-52428981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 73
               

               
Conread position:
               
11-699
               

               
Cow position:
               
chr18:52433474-52434162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 150
               

               
Conread position:
               
11-731
               

               
Cow position:
               
chr18:53525764-53526486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 217
               

               
Conread position:
               
11-732
               

               
Cow position:
               
chr18:42791960-42792685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
407, 401
               

               
Conread position:
               
12-207
               

               
Cow position:
               
chr18:40251240-40251434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
127, 70
               

               
Conread position:
               
12-253
               

               
Cow position:
               
chr18:40251164-40251396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr18:40085947-40085664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 77
               

               
Conread position:
               
12-310
               

               
Cow position:
               
chr18:55075161-55075460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
12-375
               

               
Cow position:
               
chr18:53571968-53572318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
12-400
               

               
Cow position:
               
chr18:51367606-51367218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
70, 66
               

               
Conread position:
               
12-440
               

               
Cow position:
               
chr18:49022803-49023231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
32, 36
               

               
Conread position:
               
12-440
               

               
Cow position:
               
chr18:49022887-49023315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
41, 33
               

               
Conread position:
               
12-448
               

               
Cow position:
               
chr18:42837527-42837091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 297
               

               
Conread position:
               
12-453
               

               
Cow position:
               
chr18:41198320-41198763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
145, 153
               

               
Conread position:
               
12-455
               

               
Cow position:
               
chr18:54980305-54980745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 77
               

               
Conread position:
               
12-466
               

               
Cow position:
               
chr18:55523885-55524339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 234
               

               
Conread position:
               
12-477
               

               
Cow position:
               
chr18:56494085-56494547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 336
               

               
Conread position:
               
12-484
               

               
Cow position:
               
chr18:53635383-53634913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
368, 350
               

               
Conread position:
               
12-507
               

               
Cow position:
               
chr18:43048739-43048245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 294
               

               
Conread position:
               
12-529
               

               
Cow position:
               
chr18:42837611-42837094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
479, 474
               

               
Conread position:
               
12-532
               

               
Cow position:
               
chr18:44398030-44397510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 72
               

               
Conread position:
               
12-544
               

               
Cow position:
               
chr18:42792381-42792913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
478, 471
               

               
Conread position:
               
12-554
               

               
Cow position:
               
chr18:54993565-54994105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 70
               

               
Conread position:
               
12-558
               

               
Cow position:
               
chr18:54968027-54968574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 54
               

               
Conread position:
               
12-569
               

               
Cow position:
               
chr18:51874136-51874686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
153, 23
               

               
Conread position:
               
12-613
               

               
Cow position:
               
chr18:51789568-51788967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 77
               

               
Conread position:
               
12-615
               

               
Cow position:
               
chr18:44398114-44397511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 77
               

               
Conread position:
               
12-617
               

               
Cow position:
               
chr18:40075096-40075701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 403
               

               
Conread position:
               
12-617
               

               
Cow position:
               
chr18:42674996-42674391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 78
               

               
Conread position:
               
12-625
               

               
Cow position:
               
chr18:22634629-22635244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 139
               

               
Conread position:
               
12-625
               

               
Cow position:
               
chr18:51752178-51751564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 56
               

               
Conread position:
               
12-627
               

               
Cow position:
               
chr18:33064193-33063577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
409, 392
               

               
Conread position:
               
12-630
               

               
Cow position:
               
chr18:14453947-14453326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
403, 385
               

               
Conread position:
               
12-630
               

               
Cow position:
               
chr18:43175115-43174497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 77
               

               
Conread position:
               
12-630
               

               
Cow position:
               
chr18:56316206-56316824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
417, 424
               

               
Conread position:
               
12-631
               

               
Cow position:
               
chr18:55066953-55066334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 78
               

               
Conread position:
               
12-633
               

               
Cow position:
               
chr18:55523717-55524338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
557, 549
               

               
Conread position:
               
12-634
               

               
Cow position:
               
chr18:1417991-1418613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 178
               

               
Conread position:
               
12-636
               

               
Cow position:
               
chr18:54967945-54968568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 73
               

               
Conread position:
               
12-639
               

               
Cow position:
               
chr18:53498384-53499009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 85
               

               
Conread position:
               
12-645
               

               
Cow position:
               
chr18:56434118-56434751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 336
               

               
Conread position:
               
12-646
               

               
Cow position:
               
chr18:56433457-56434089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 187
               

               
Conread position:
               
12-647
               

               
Cow position:
               
chr18:52447265-52447900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
12-650
               

               
Cow position:
               
chr18:51368361-51367724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 143
               

               
Conread position:
               
12-651
               

               
Cow position:
               
chr18:40086357-40085728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 77
               

               
Conread position:
               
12-651
               

               
Cow position:
               
chr18:43175199-43174560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
12-651
               

               
Cow position:
               
chr18:43175451-43174812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 77
               

               
Conread position:
               
12-651
               

               
Cow position:
               
chr18:44154378-44153746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 63
               

               
Conread position:
               
12-651
               

               
Cow position:
               
chr18:44184645-44184006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 77
               

               
Conread position:
               
12-653
               

               
Cow position:
               
chr18:33064361-33063720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
405, 393
               

               
Conread position:
               
12-653
               

               
Cow position:
               
chr18:42675332-42674691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 134
               

               
Conread position:
               
12-653
               

               
Cow position:
               
chr18:50099048-50099689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 307
               

               
Conread position:
               
12-656
               

               
Cow position:
               
chr18:43120166-43119522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
12-660
               

               
Cow position:
               
chr18:43093429-43092782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 238
               

               
Conread position:
               
12-663
               

               
Cow position:
               
chr18:51969414-51970054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 75
               

               
Conread position:
               
12-667
               

               
Cow position:
               
chr18:42791205-42791860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 64
               

               
Conread position:
               
12-678
               

               
Cow position:
               
chr18:56248170-56247494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 73
               

               
Conread position:
               
12-682
               

               
Cow position:
               
chr18:41949191-41948521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
406, 400
               

               
Conread position:
               
12-683
               

               
Cow position:
               
chr18:52447685-52448357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 64
               

               
Conread position:
               
12-684
               

               
Cow position:
               
chr18:55008716-55009386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 139
               

               
Conread position:
               
12-684
               

               
Cow position:
               
chr18:55067037-55066365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
573, 553
               

               
Conread position:
               
12-690
               

               
Cow position:
               
chr18:41949107-41948429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 72
               

               
Conread position:
               
12-690
               

               
Cow position:
               
chr18:42985571-42984893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 140
               

               
Conread position:
               
12-690
               

               
Cow position:
               
chr18:43175535-43174857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 72
               

               
Conread position:
               
12-690
               

               
Cow position:
               
chr18:44398198-44397520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 77
               

               
Conread position:
               
12-691
               

               
Cow position:
               
chr18:53509311-53509990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 216
               

               
Conread position:
               
12-692
               

               
Cow position:
               
chr18:33064865-33064185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 66
               

               
Conread position:
               
12-693
               

               
Cow position:
               
chr18:49032805-49032124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 402
               

               
Conread position:
               
12-693
               

               
Cow position:
               
chr18:56316290-56316971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
405, 380
               

               
Conread position:
               
12-695
               

               
Cow position:
               
chr18:40086525-40085852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 76
               

               
Conread position:
               
12-695
               

               
Cow position:
               
chr18:42791457-42792140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
12-695
               

               
Cow position:
               
chr18:42837863-42837180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
12-695
               

               
Cow position:
               
chr18:42985487-42984804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 72
               

               
Conread position:
               
12-695
               

               
Cow position:
               
chr18:43023082-43022399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 78
               

               
Conread position:
               
12-695
               

               
Cow position:
               
chr18:43175283-43174600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 149
               

               
Conread position:
               
12-695
               

               
Cow position:
               
chr18:44239746-44240429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 78
               

               
Conread position:
               
12-695
               

               
Cow position:
               
chr18:44239998-44240681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 70
               

               
Conread position:
               
12-695
               

               
Cow position:
               
chr18:51368529-51367846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 56
               

               
Conread position:
               
12-698
               

               
Cow position:
               
chr18:53586926-53586240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 336
               

               
Conread position:
               
12-698
               

               
Cow position:
               
chr18:55523549-55524235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 36
               

               
Conread position:
               
12-699
               

               
Cow position:
               
chr18:14454031-14453344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 78
               

               
Conread position:
               
12-699
               

               
Cow position:
               
chr18:40324811-40324124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 202
               

               
Conread position:
               
12-699
               

               
Cow position:
               
chr18:41197732-41198419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 306
               

               
Conread position:
               
12-699
               

               
Cow position:
               
chr18:42792129-42792816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
12-699
               

               
Cow position:
               
chr18:42985319-42984632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 68
               

               
Conread position:
               
12-699
               

               
Cow position:
               
chr18:43094088-43093414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 54
               

               
Conread position:
               
12-699
               

               
Cow position:
               
chr18:44239830-44240517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 72
               

               
Conread position:
               
12-699
               

               
Cow position:
               
chr18:44398366-44397679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 146
               

               
Conread position:
               
12-699
               

               
Cow position:
               
chr18:51812727-51812040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 77
               

               
Conread position:
               
12-699
               

               
Cow position:
               
chr18:52447433-52448120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 64
               

               
Conread position:
               
12-700
               

               
Cow position:
               
chr18:33064277-33063589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 78
               

               
Conread position:
               
12-700
               

               
Cow position:
               
chr18:33064613-33063925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
402, 414
               

               
Conread position:
               
12-700
               

               
Cow position:
               
chr18:33064697-33064009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
566, 572
               

               
Conread position:
               
12-700
               

               
Cow position:
               
chr18:40075012-40075700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 336
               

               
Conread position:
               
12-700
               

               
Cow position:
               
chr18:42744476-42743788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 217
               

               
Conread position:
               
12-700
               

               
Cow position:
               
chr18:42744644-42743956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
12-700
               

               
Cow position:
               
chr18:49033309-49032621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-700
               

               
Cow position:
               
chr18:53498042-53498733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 410
               

               
Conread position:
               
12-700
               

               
Cow position:
               
chr18:53498466-53499146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 72
               

               
Conread position:
               
12-700
               

               
Cow position:
               
chr18:53586758-53586070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 78
               

               
Conread position:
               
12-700
               

               
Cow position:
               
chr18:54967861-54968547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 78
               

               
Conread position:
               
12-700
               

               
Cow position:
               
chr18:54992809-54993497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 241
               

               
Conread position:
               
12-700
               

               
Cow position:
               
chr18:54993145-54993833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 78
               

               
Conread position:
               
12-700
               

               
Cow position:
               
chr18:55018205-55018892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 56
               

               
Conread position:
               
12-700
               

               
Cow position:
               
chr18:56247740-56247062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 72
               

               
Conread position:
               
12-701
               

               
Cow position:
               
chr18:53586674-53585985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
480, 473
               

               
Conread position:
               
12-702
               

               
Cow position:
               
chr18:50083355-50084044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
400, 405
               

               
Conread position:
               
12-702
               

               
Cow position:
               
chr18:54967777-54968465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 254
               

               
Conread position:
               
12-722
               

               
Cow position:
               
chr18:54992893-54993607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 58
               

               
Conread position:
               
12-723
               

               
Cow position:
               
chr18:50848240-50848955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 58
               

               
Conread position:
               
12-726
               

               
Cow position:
               
chr18:42791793-42792510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 65
               

               
Conread position:
               
12-726
               

               
Cow position:
               
chr18:54979885-54980601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
12-726
               

               
Cow position:
               
chr18:54992977-54993695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 61
               

               
Conread position:
               
12-726
               

               
Cow position:
               
chr18:54993229-54993945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 63
               

               
Conread position:
               
12-731
               

               
Cow position:
               
chr18:55523381-55524104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 204
               

               
Conread position:
               
12-732
               

               
Cow position:
               
chr18:42675164-42674441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 149
               

               
Conread position:
               
12-732
               

               
Cow position:
               
chr18:42791709-42792432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 146
               

               
Conread position:
               
12-732
               

               
Cow position:
               
chr18:53498210-53498938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 255
               

               
Conread position:
               
12-732
               

               
Cow position:
               
chr18:53559831-53560555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
540
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
12-732
               

               
Cow position:
               
chr18:53586842-53586118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
12-732
               

               
Cow position:
               
chr18:54967192-54967912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 139
               

               
Conread position:
               
12-732
               

               
Cow position:
               
chr18:55017869-55018592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 306
               

               
Conread position:
               
12-732
               

               
Cow position:
               
chr18:55018037-55018761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 216
               

               
Conread position:
               
13-695
               

               
Cow position:
               
chr18:44253901-44253232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 148
               

               
Conread position:
               
13-700
               

               
Cow position:
               
chr18:42791038-42791725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 52
               

               
Conread position:
               
13-700
               

               
Cow position:
               
chr18:55017786-55018473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 215
               

               
Conread position:
               
13-700
               

               
Cow position:
               
chr18:55523634-55524321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
407, 413
               

               
Conread position:
               
13-732
               

               
Cow position:
               
chr18:50848157-50848880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
13-732
               

               
Cow position:
               
chr18:50848325-50849048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
397, 403
               

               
Conread position:
               
13-732
               

               
Cow position:
               
chr18:54966941-54967664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 142
               

               
Conread position:
               
14-550
               

               
Cow position:
               
chr18:55018375-55018910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 76
               

               
Conread position:
               
14-557
               

               
Cow position:
               
chr18:56434708-56435237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
67, 54
               

               
Conread position:
               
14-571
               

               
Cow position:
               
chr18:42827395-42827957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 292
               

               
Conread position:
               
14-651
               

               
Cow position:
               
chr18:51874054-51874684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 75
               

               
Conread position:
               
14-669
               

               
Cow position:
               
chr18:40086105-40085445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
30, 34
               

               
Conread position:
               
14-691
               

               
Cow position:
               
chr18:49021726-49022392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
145, 151
               

               
Conread position:
               
14-699
               

               
Cow position:
               
chr18:42791627-42792312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 231
               

               
Conread position:
               
14-699
               

               
Cow position:
               
chr18:50083609-50084295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
580, 565
               

               
Conread position:
               
14-699
               

               
Cow position:
               
chr18:51368023-51367339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 228
               

               
Conread position:
               
14-699
               

               
Cow position:
               
chr18:51400523-51401208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 313
               

               
Conread position:
               
14-699
               

               
Cow position:
               
chr18:53635969-53635284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 76
               

               
Conread position:
               
14-700
               

               
Cow position:
               
chr18:54980055-54980738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 208
               

               
Conread position:
               
14-731
               

               
Cow position:
               
chr18:56434045-56434757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 50
               

               
Conread position:
               
15-275
               

               
Cow position:
               
chr18:56329103-56328843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-276
               

               
Cow position:
               
chr18:44240589-44240850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-277
               

               
Cow position:
               
chr18:42984728-42984466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
15-305
               

               
Cow position:
               
chr18:42792636-42792926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
15-531
               

               
Cow position:
               
chr18:49021643-49022160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
29, 33
               

               
Conread position:
               
15-533
               

               
Cow position:
               
chr18:41198239-41198757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 207
               

               
Conread position:
               
15-561
               

               
Cow position:
               
chr18:56494004-56494547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 207
               

               
Conread position:
               
15-567
               

               
Cow position:
               
chr18:50048727-50048181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
381, 0
               

               
Conread position:
               
15-568
               

               
Cow position:
               
chr18:51789229-51788677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
67, 62
               

               
Conread position:
               
15-569
               

               
Cow position:
               
chr18:51812472-51811918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
15-570
               

               
Cow position:
               
chr18:50281750-50282305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
23, 27
               

               
Conread position:
               
15-573
               

               
Cow position:
               
chr18:50848915-50849473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 145
               

               
Conread position:
               
15-614
               

               
Cow position:
               
chr18:40306749-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
402, 392
               

               
Conread position:
               
15-616
               

               
Cow position:
               
chr18:55497630-55497029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
397, 411
               

               
Conread position:
               
15-617
               

               
Cow position:
               
chr18:40324472-40323873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
15-622
               

               
Cow position:
               
chr18:50271537-50272144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 27
               

               
Conread position:
               
15-628
               

               
Cow position:
               
chr18:42792300-42792913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
397, 402
               

               
Conread position:
               
15-645
               

               
Cow position:
               
chr18:44184726-44184096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 53
               

               
Conread position:
               
15-651
               

               
Cow position:
               
chr18:40086438-40085812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 221
               

               
Conread position:
               
15-651
               

               
Cow position:
               
chr18:40306329-40306965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 70
               

               
Conread position:
               
15-651
               

               
Cow position:
               
chr18:40306413-40307049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 207
               

               
Conread position:
               
15-651
               

               
Cow position:
               
chr18:40306581-40307217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 291
               

               
Conread position:
               
15-651
               

               
Cow position:
               
chr18:52432890-52433526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 102
               

               
Conread position:
               
15-653
               

               
Cow position:
               
chr18:56128113-56128751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
15-654
               

               
Cow position:
               
chr18:52427541-52428180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
93, 102
               

               
Conread position:
               
15-670
               

               
Cow position:
               
chr18:42791292-42791947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 147
               

               
Conread position:
               
15-670
               

               
Cow position:
               
chr18:42837776-42837121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 332
               

               
Conread position:
               
15-675
               

               
Cow position:
               
chr18:56248244-56247580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 22
               

               
Conread position:
               
15-690
               

               
Cow position:
               
chr18:42744725-42744050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 146
               

               
Conread position:
               
15-690
               

               
Cow position:
               
chr18:43022743-43022068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 54
               

               
Conread position:
               
15-690
               

               
Cow position:
               
chr18:51812892-51812217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 68
               

               
Conread position:
               
15-691
               

               
Cow position:
               
chr18:42960307-42959640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
47, 54
               

               
Conread position:
               
15-695
               

               
Cow position:
               
chr18:42960139-42959468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
15-695
               

               
Cow position:
               
chr18:44184810-44184130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 53
               

               
Conread position:
               
15-698
               

               
Cow position:
               
chr18:56493665-56494351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 76
               

               
Conread position:
               
15-699
               

               
Cow position:
               
chr18:42790956-42791640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 135
               

               
Conread position:
               
15-699
               

               
Cow position:
               
chr18:42791880-42792564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
15-699
               

               
Cow position:
               
chr18:42792216-42792900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
401, 397
               

               
Conread position:
               
15-699
               

               
Cow position:
               
chr18:44398279-44397595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 74
               

               
Conread position:
               
15-699
               

               
Cow position:
               
chr18:49022304-49022986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 62
               

               
Conread position:
               
15-699
               

               
Cow position:
               
chr18:50059715-50059031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
15-699
               

               
Cow position:
               
chr18:53635884-53635200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 305
               

               
Conread position:
               
15-699
               

               
Cow position:
               
chr18:56128281-56128965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 302
               

               
Conread position:
               
15-700
               

               
Cow position:
               
chr18:41197903-41198590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
15-700
               

               
Cow position:
               
chr18:42744557-42743872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 75
               

               
Conread position:
               
15-700
               

               
Cow position:
               
chr18:43093594-43092909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 60
               

               
Conread position:
               
15-700
               

               
Cow position:
               
chr18:51789733-51789048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 68
               

               
Conread position:
               
15-700
               

               
Cow position:
               
chr18:53587091-53586406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 72
               

               
Conread position:
               
15-700
               

               
Cow position:
               
chr18:54979300-54979985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 58
               

               
Conread position:
               
15-700
               

               
Cow position:
               
chr18:54992560-54993245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 58
               

               
Conread position:
               
15-710
               

               
Cow position:
               
chr18:49032634-49031938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
570, 543
               

               
Conread position:
               
15-722
               

               
Cow position:
               
chr18:40306245-40306956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 58
               

               
Conread position:
               
15-722
               

               
Cow position:
               
chr18:53610475-53609764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
15-726
               

               
Cow position:
               
chr18:41197651-41198364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
401, 397
               

               
Conread position:
               
15-731
               

               
Cow position:
               
chr18:40074850-40075567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
15-732
               

               
Cow position:
               
chr18:33065030-33064309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
15-732
               

               
Cow position:
               
chr18:53587007-53586286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
644, 627
               

               
Conread position:
               
15-732
               

               
Cow position:
               
chr18:54967696-54968415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 73
               

               
Conread position:
               
15-732
               

               
Cow position:
               
chr18:56493749-56494473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 336
               

               
Conread position:
               
16-179
               

               
Cow position:
               
chr18:53572405-53572568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
16-438
               

               
Cow position:
               
chr18:14453295-14452873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 70
               

               
Conread position:
               
16-468
               

               
Cow position:
               
chr18:56434542-56434994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
16-477
               

               
Cow position:
               
chr18:50295433-50295893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 65
               

               
Conread position:
               
16-483
               

               
Cow position:
               
chr18:50251079-50251543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
136, 52
               

               
Conread position:
               
16-552
               

               
Cow position:
               
chr18:56316546-56317083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
518, 0
               

               
Conread position:
               
16-575
               

               
Cow position:
               
chr18:50048894-50048335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 52
               

               
Conread position:
               
16-613
               

               
Cow position:
               
chr18:50049146-50048549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
217, 242
               

               
Conread position:
               
16-625
               

               
Cow position:
               
chr18:50250914-50251517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
304, 15
               

               
Conread position:
               
16-645
               

               
Cow position:
               
chr18:56493921-56494547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 84
               

               
Conread position:
               
16-651
               

               
Cow position:
               
chr18:40324639-40324004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
16-651
               

               
Cow position:
               
chr18:49022639-49023274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
16-652
               

               
Cow position:
               
chr18:41198072-41198708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
460, 476
               

               
Conread position:
               
16-670
               

               
Cow position:
               
chr18:42792049-42792703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 149
               

               
Conread position:
               
16-678
               

               
Cow position:
               
chr18:50099640-50100305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 215
               

               
Conread position:
               
16-682
               

               
Cow position:
               
chr18:50022071-50021402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 138
               

               
Conread position:
               
16-686
               

               
Cow position:
               
chr18:41949271-41948602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 73
               

               
Conread position:
               
16-692
               

               
Cow position:
               
chr18:50848748-50849424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
16-695
               

               
Cow position:
               
chr18:56329942-56329263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 149
               

               
Conread position:
               
16-699
               

               
Cow position:
               
chr18:42675244-42674561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 73
               

               
Conread position:
               
16-699
               

               
Cow position:
               
chr18:43167785-43168468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 57
               

               
Conread position:
               
16-699
               

               
Cow position:
               
chr18:50022497-50021808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 52
               

               
Conread position:
               
16-699
               

               
Cow position:
               
chr18:50059378-50058695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 64
               

               
Conread position:
               
16-699
               

               
Cow position:
               
chr18:50099472-50100155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 73
               

               
Conread position:
               
16-699
               

               
Cow position:
               
chr18:50848079-50848759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 53
               

               
Conread position:
               
16-699
               

               
Cow position:
               
chr18:50848412-50849095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
364, 370
               

               
Conread position:
               
16-700
               

               
Cow position:
               
chr18:40306498-40307182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 206
               

               
Conread position:
               
16-700
               

               
Cow position:
               
chr18:40324723-40324039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 145
               

               
Conread position:
               
16-700
               

               
Cow position:
               
chr18:42791125-42791809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 55
               

               
Conread position:
               
16-700
               

               
Cow position:
               
chr18:49021314-49021992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
61, 72
               

               
Conread position:
               
16-700
               

               
Cow position:
               
chr18:50059210-50058526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 67
               

               
Conread position:
               
16-701
               

               
Cow position:
               
chr18:56248082-56247391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 186
               

               
Conread position:
               
16-710
               

               
Cow position:
               
chr18:51765585-51764892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
632, 667
               

               
Conread position:
               
16-722
               

               
Cow position:
               
chr18:50059630-50058920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 57
               

               
Conread position:
               
16-726
               

               
Cow position:
               
chr18:55523301-55524015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 70
               

               
Conread position:
               
16-731
               

               
Cow position:
               
chr18:50246070-50246789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 57
               

               
Conread position:
               
16-732
               

               
Cow position:
               
chr18:50083527-50084246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
560, 569
               

               
Conread position:
               
16-732
               

               
Cow position:
               
chr18:53497965-53498685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 52
               

               
Conread position:
               
17-317
               

               
Cow position:
               
chr18:56267466-56267166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-355
               

               
Cow position:
               
chr18:50282004-50282342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-529
               

               
Cow position:
               
chr18:50099809-50100321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 63
               

               
Conread position:
               
17-533
               

               
Cow position:
               
chr18:51400694-51401210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 302
               

               
Conread position:
               
17-573
               

               
Cow position:
               
chr18:51367769-51367213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
65, 54
               

               
Conread position:
               
17-612
               

               
Cow position:
               
chr18:56329437-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 60
               

               
Conread position:
               
17-617
               

               
Cow position:
               
chr18:51766087-51765488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
157, 9
               

               
Conread position:
               
17-617
               

               
Cow position:
               
chr18:53635630-53635029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
567, 560
               

               
Conread position:
               
17-649
               

               
Cow position:
               
chr18:53610305-53609674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 207
               

               
Conread position:
               
17-651
               

               
Cow position:
               
chr18:51367852-51367219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
148, 55
               

               
Conread position:
               
17-651
               

               
Cow position:
               
chr18:55008637-55009271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 211
               

               
Conread position:
               
17-652
               

               
Cow position:
               
chr18:50059545-50058910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 61
               

               
Conread position:
               
17-653
               

               
Cow position:
               
chr18:1417828-1418464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 63
               

               
Conread position:
               
17-653
               

               
Cow position:
               
chr18:56128535-56129171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 329
               

               
Conread position:
               
17-654
               

               
Cow position:
               
chr18:52012197-52011561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 233
               

               
Conread position:
               
17-683
               

               
Cow position:
               
chr18:49032714-49032050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
560, 14
               

               
Conread position:
               
17-683
               

               
Cow position:
               
chr18:56329521-56328855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 144
               

               
Conread position:
               
17-685
               

               
Cow position:
               
chr18:40086775-40086106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
17-686
               

               
Cow position:
               
chr18:42693634-42692965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
458, 390
               

               
Conread position:
               
17-690
               

               
Cow position:
               
chr18:43093508-43092835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 212
               

               
Conread position:
               
17-692
               

               
Cow position:
               
chr18:40074933-40075608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
677
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
568, 560
               

               
Conread position:
               
17-692
               

               
Cow position:
               
chr18:40306667-40307342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
677
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
571, 560
               

               
Conread position:
               
17-692
               

               
Cow position:
               
chr18:49033052-49032377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 66
               

               
Conread position:
               
17-692
               

               
Cow position:
               
chr18:50246155-50246830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 72
               

               
Conread position:
               
17-692
               

               
Cow position:
               
chr18:52012365-52011690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
677
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 188
               

               
Conread position:
               
17-693
               

               
Cow position:
               
chr18:50295266-50295940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 310
               

               
Conread position:
               
17-695
               

               
Cow position:
               
chr18:33064440-33063762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 241
               

               
Conread position:
               
17-695
               

               
Cow position:
               
chr18:49032968-49032290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 212
               

               
Conread position:
               
17-695
               

               
Cow position:
               
chr18:49033220-49032542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
398, 390
               

               
Conread position:
               
17-695
               

               
Cow position:
               
chr18:53635714-53635036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
17-695
               

               
Cow position:
               
chr18:56128451-56129129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
17-699
               

               
Cow position:
               
chr18:43093916-43093246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 51
               

               
Conread position:
               
17-699
               

               
Cow position:
               
chr18:50059293-50058611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 60
               

               
Conread position:
               
17-699
               

               
Cow position:
               
chr18:50245737-50246417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
60, 15
               

               
Conread position:
               
17-699
               

               
Cow position:
               
chr18:52447522-52448204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
558, 568
               

               
Conread position:
               
17-699
               

               
Cow position:
               
chr18:56128199-56128881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
17-699
               

               
Cow position:
               
chr18:56128367-56129049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 167
               

               
Conread position:
               
17-699
               

               
Cow position:
               
chr18:56329857-56329175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 61
               

               
Conread position:
               
17-700
               

               
Cow position:
               
chr18:53560004-53560687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 331
               

               
Conread position:
               
17-700
               

               
Cow position:
               
chr18:54967113-54967793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 211
               

               
Conread position:
               
17-700
               

               
Cow position:
               
chr18:56329689-56329006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
474, 484
               

               
Conread position:
               
17-701
               

               
Cow position:
               
chr18:42694054-42693368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 310
               

               
Conread position:
               
17-716
               

               
Cow position:
               
chr18:50059461-50058758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 56
               

               
Conread position:
               
17-716
               

               
Cow position:
               
chr18:56330025-56329322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 233
               

               
Conread position:
               
17-722
               

               
Cow position:
               
chr18:53635798-53635089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 169
               

               
Conread position:
               
17-726
               

               
Cow position:
               
chr18:55067116-55066403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 331
               

               
Conread position:
               
17-728
               

               
Cow position:
               
chr18:50059125-50058411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 139
               

               
Conread position:
               
17-731
               

               
Cow position:
               
chr18:50848581-50849299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 148
               

               
Conread position:
               
17-732
               

               
Cow position:
               
chr18:33064776-33064057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 212
               

               
Conread position:
               
17-732
               

               
Cow position:
               
chr18:42694138-42693419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
401, 395
               

               
Conread position:
               
17-732
               

               
Cow position:
               
chr18:49033136-49032417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 212
               

               
Conread position:
               
17-732
               

               
Cow position:
               
chr18:50048977-50048264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 73
               

               
Conread position:
               
17-732
               

               
Cow position:
               
chr18:53559752-53560471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 73
               

               
Conread position:
               
17-732
               

               
Cow position:
               
chr18:55017958-55018677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 64
               

               
Conread position:
               
18-670
               

               
Cow position:
               
chr18:43093675-43093025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 59
               

               
Conread position:
               
20-459
               

               
Cow position:
               
chr18:53571892-53572318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
20-640
               

               
Cow position:
               
chr18:50250839-50251446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
214, 57
               

               
Conread position:
               
20-692
               

               
Cow position:
               
chr18:33064941-33064269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 142
               

               
Conread position:
               
20-692
               

               
Cow position:
               
chr18:56493841-56494513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 164
               

               
Conread position:
               
20-699
               

               
Cow position:
               
chr18:33065109-33064430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 127
               

               
Conread position:
               
21-683
               

               
Cow position:
               
chr18:42693966-42693304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
653, 657
               

               
Conread position:
               
21-691
               

               
Cow position:
               
chr18:42693798-42693129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
41, 62
               

               
Conread position:
               
21-692
               

               
Cow position:
               
chr18:42675491-42674820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 304
               

               
Conread position:
               
21-695
               

               
Cow position:
               
chr18:56316047-56316721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
642, 620
               

               
Conread position:
               
22-543
               

               
Cow position:
               
chr18:53571810-53572318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 189
               

               
Conread position:
               
22-699
               

               
Cow position:
               
chr18:43167706-43168384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 351
               

               
Conread position:
               
22-700
               

               
Cow position:
               
chr18:53559673-53560351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 143
               

               
Conread position:
               
23-280
               

               
Cow position:
               
chr18:40251562-40251814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
157, 76
               

               
Conread position:
               
23-633
               

               
Cow position:
               
chr18:51838786-51838186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 67
               

               
Conread position:
               
23-699
               

               
Cow position:
               
chr18:50083450-50084126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 206
               

               
Conread position:
               
24-651
               

               
Cow position:
               
chr18:40324881-40324256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
561, 15
               

               
Conread position:
               
24-700
               

               
Cow position:
               
chr18:50098978-50099654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 15
               

               
Conread position:
               
24-700
               

               
Cow position:
               
chr18:51368602-51367925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 300
               

               
Conread position:
               
25-567
               

               
Cow position:
               
chr18:33093103-33092562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 20
               

               
Conread position:
               
25-691
               

               
Cow position:
               
chr18:42724584-42723920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
185, 19
               

               
Conread position:
               
25-692
               

               
Cow position:
               
chr18:50271463-50272130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
551, 546
               

               
Conread position:
               
25-731
               

               
Cow position:
               
chr18:56330185-56329475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
26-663
               

               
Cow position:
               
chr18:50022399-50021760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
26-692
               

               
Cow position:
               
chr18:53636125-53635459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 62
               

               
Conread position:
               
26-695
               

               
Cow position:
               
chr18:53610380-53609711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 51
               

               
Conread position:
               
26-695
               

               
Cow position:
               
chr18:56128040-56128709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 41
               

               
Conread position:
               
27-318
               

               
Cow position:
               
chr18:51873704-51873995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
31-651
               

               
Cow position:
               
chr18:50031058-50030436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 46
               

               
Conread position:
               
32-652
               

               
Cow position:
               
chr18:41197500-41198120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 51
               

               
Conread position:
               
32-699
               

               
Cow position:
               
chr18:43120314-43119647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 52
               

               
Conread position:
               
32-699
               

               
Cow position:
               
chr18:53610542-53609875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
33-624
               

               
Cow position:
               
chr18:49021496-49022084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
49, 45
               

               
Conread position:
               
34-651
               

               
Cow position:
               
chr18:40306180-40306797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 66
               

               
Conread position:
               
35-651
               

               
Cow position:
               
chr18:52427645-52428261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 32
               

               
Conread position:
               
35-654
               

               
Cow position:
               
chr18:52432994-52433613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 32
               

               
Conread position:
               
35-695
               

               
Cow position:
               
chr18:52447372-52448032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 117
               

               
Conread position:
               
35-699
               

               
Cow position:
               
chr18:56433644-56434301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 61
               

               
Conread position:
               
38-651
               

               
Cow position:
               
chr18:41949333-41948720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 46
               

               
Conread position:
               
38-683
               

               
Cow position:
               
chr18:50295203-50295848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
538, 529
               

               
Conread position:
               
39-402
               

               
Cow position:
               
chr18:53555189-53554828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
40-567
               

               
Cow position:
               
chr18:50251019-50251543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
40-700
               

               
Cow position:
               
chr18:50281691-50282353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 124
               

               
Conread position:
               
40-731
               

               
Cow position:
               
chr18:42791569-42792264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
450, 440
               

               
Conread position:
               
41-654
               

               
Cow position:
               
chr18:52432745-52433361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
41-692
               

               
Cow position:
               
chr18:49033364-49032713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 308
               

               
Conread position:
               
41-699
               

               
Cow position:
               
chr18:44398421-44397763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 307
               

               
Conread position:
               
41-699
               

               
Cow position:
               
chr18:50083300-50083958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 105
               

               
Conread position:
               
41-731
               

               
Cow position:
               
chr18:50099161-50099855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 205
               

               
Conread position:
               
45-239
               

               
Cow position:
               
chr18:53572350-53572544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
46-655
               

               
Cow position:
               
chr18:51752228-51751618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 31
               

               
Conread position:
               
47-318
               

               
Cow position:
               
chr18:55075112-55075384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
47-653
               

               
Cow position:
               
chr18:43175584-43174978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 269
               

               
Conread position:
               
47-699
               

               
Cow position:
               
chr18:51839537-51838885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 114
               

               
Conread position:
               
48-389
               

               
Cow position:
               
chr18:50021700-50021361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
48-700
               

               
Cow position:
               
chr18:54992677-54993329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 188
               

               
Conread position:
               
48-722
               

               
Cow position:
               
chr18:42790905-42791583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 271
               

               
Conread position:
               
48-732
               

               
Cow position:
               
chr18:54979417-54980104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 98
               

               
Conread position:
               
49-651
               

               
Cow position:
               
chr18:51789615-51789013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 35
               

               
Conread position:
               
49-699
               

               
Cow position:
               
chr18:51812774-51812124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 35
               

               
Conread position:
               
50-695
               

               
Cow position:
               
chr18:53587140-53586495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 115
               

               
Conread position:
               
50-732
               

               
Cow position:
               
chr18:56247786-56247111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
56-699
               

               
Cow position:
               
chr18:50271410-50272053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 172
               

               
Conread position:
               
69-692
               

               
Cow position:
               
chr18:49022608-49023231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
70-651
               

               
Cow position:
               
chr18:40086973-40086390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 198
               

               
Conread position:
               
71-661
               

               
Cow position:
               
chr18:50098940-50099529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
76-653
               

               
Cow position:
               
chr18:51400332-51400910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 86
               

               
Conread position:
               
76-693
               

               
Cow position:
               
chr18:56433354-56433971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 96
               

               
Conread position:
               
76-722
               

               
Cow position:
               
chr18:42837884-42837233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 182
               

               
Conread position:
               
77-699
               

               
Cow position:
               
chr18:42744747-42744125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
508, 501
               

               
Conread position:
               
78-695
               

               
Cow position:
               
chr18:43120352-43119735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
81-657
               

               
Cow position:
               
chr18:42837962-42837386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 80
               

               
Conread position:
               
81-692
               

               
Cow position:
               
chr18:1417976-1418587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 193
               

               
Conread position:
               
82-700
               

               
Cow position:
               
chr18:44398464-44397846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
83-489
               

               
Cow position:
               
chr18:44153653-44153250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 63
               

               
Conread position:
               
83-653
               

               
Cow position:
               
chr18:42960323-42959753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 333
               

               
Conread position:
               
83-731
               

               
Cow position:
               
chr18:22634534-22635183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 89
               

               
Conread position:
               
84-699
               

               
Cow position:
               
chr18:43167601-43168216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
114, 106
               

               
Conread position:
               
84-700
               

               
Cow position:
               
chr18:55017773-55018389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 264
               

               
Conread position:
               
85-624
               

               
Cow position:
               
chr18:14454042-14453503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
408, 394
               

               
Conread position:
               
85-699
               

               
Cow position:
               
chr18:52446918-52447532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
332, 317
               

               
Conread position:
               
86-701
               

               
Cow position:
               
chr18:42724609-42723992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
208, 203
               

               
Conread position:
               
88-558
               

               
Cow position:
               
chr18:49021632-49022103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
453, 465
               

               
Conread position:
               
88-651
               

               
Cow position:
               
chr18:42827385-42827953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 304
               

               
Conread position:
               
88-651
               

               
Cow position:
               
chr18:43023090-43022527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 76
               

               
Conread position:
               
88-655
               

               
Cow position:
               
chr18:41949367-41948800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
88-690
               

               
Cow position:
               
chr18:44239990-44240592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 76
               

               
Conread position:
               
88-692
               

               
Cow position:
               
chr18:44253335-44252742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
327, 218
               

               
Conread position:
               
88-695
               

               
Cow position:
               
chr18:44184905-44184298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
88-699
               

               
Cow position:
               
chr18:42675340-42674729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 323
               

               
Conread position:
               
89-669
               

               
Cow position:
               
chr18:51874045-51874618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 114
               

               
Conread position:
               
89-690
               

               
Cow position:
               
chr18:44254073-44253476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 74
               

               
Conread position:
               
89-690
               

               
Cow position:
               
chr18:51789743-51789142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
72, 76
               

               
Conread position:
               
89-692
               

               
Cow position:
               
chr18:52012459-52011858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
89-699
               

               
Cow position:
               
chr18:51368621-51368010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 324
               

               
Conread position:
               
89-700
               

               
Cow position:
               
chr18:52012377-52011766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
493, 483
               

               
Conread position:
               
89-732
               

               
Cow position:
               
chr18:55008459-55009103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 94
               

               
Conread position:
               
90-651
               

               
Cow position:
               
chr18:42985577-42985017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 150
               

               
Conread position:
               
90-651
               

               
Cow position:
               
chr18:52427532-52428093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 229
               

               
Conread position:
               
90-651
               

               
Cow position:
               
chr18:52432881-52433442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 229
               

               
Conread position:
               
90-695
               

               
Cow position:
               
chr18:44239740-44240345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 74
               

               
Conread position:
               
90-732
               

               
Cow position:
               
chr18:55008376-55009020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
390, 176
               

               
Conread position:
               
91-659
               

               
Cow position:
               
chr18:44154470-44153900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 232
               

               
Conread position:
               
93-459
               

               
Cow position:
               
chr18:40251076-40251434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
93-699
               

               
Cow position:
               
chr18:50059807-50059199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 35
               

               
Conread position:
               
94-484
               

               
Cow position:
               
chr18:43048741-43048351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
233, 212
               

               
Conread position:
               
95-696
               

               
Cow position:
               
chr18:33093118-33092517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
97-668
               

               
Cow position:
               
chr18:44253901-44253331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 315
               

               
Conread position:
               
99-700
               

               
Cow position:
               
chr18:51812892-51812291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 66
               

               
Conread position:
               
100-615
               

               
Cow position:
               
chr18:14453295-14452779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
142, 129
               

               
Conread position:
               
101-717
               

               
Cow position:
               
chr18:51752340-51751724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
94, 9
               

               
Conread position:
               
103-699
               

               
Cow position:
               
chr18:33065110-33064514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
106-627
               

               
Cow position:
               
chr18:53571810-53572318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 190
               

               
Conread position:
               
110-357
               

               
Cow position:
               
chr18:40251565-40251808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
161, 73
               

               
Conread position:
               
110-711
               

               
Cow position:
               
chr18:53636125-53635520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 64
               

               
Conread position:
               
111-699
               

               
Cow position:
               
chr18:50295192-50295780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
134, 157
               

               
Conread position:
               
116-695
               

               
Cow position:
               
chr18:49033373-49032794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 47
               

               
Conread position:
               
119-690
               

               
Cow position:
               
chr18:49021498-49022066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
177, 74
               

               
Conread position:
               
119-690
               

               
Cow position:
               
chr18:55497694-55497123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
372, 361
               

               
Conread position:
               
119-695
               

               
Cow position:
               
chr18:43120395-43119819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 36
               

               
Conread position:
               
119-732
               

               
Cow position:
               
chr18:40306181-40306798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 65
               

               
Conread position:
               
121-700
               

               
Cow position:
               
chr18:49022242-49022819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
36, 44
               

               
Conread position:
               
122-700
               

               
Cow position:
               
chr18:43175593-43175015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
449, 462
               

               
Conread position:
               
126-699
               

               
Cow position:
               
chr18:51813114-51812544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
283, 58
               

               
Conread position:
               
127-637
               

               
Cow position:
               
chr18:43094219-43093716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
299, 41
               

               
Conread position:
               
127-700
               

               
Cow position:
               
chr18:1417854-1418427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
130-408
               

               
Cow position:
               
chr18:55075111-55075390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
131-325
               

               
Cow position:
               
chr18:53572352-53572546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
131-700
               

               
Cow position:
               
chr18:50083222-50083793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
133-651
               

               
Cow position:
               
chr18:51766137-51765622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
148, 51
               

               
Conread position:
               
134-710
               

               
Cow position:
               
chr18:50031123-50030545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
115, 95
               

               
Conread position:
               
139-726
               

               
Cow position:
               
chr18:50245690-50246280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
140-459
               

               
Cow position:
               
chr18:53555173-53554854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
87, 191
               

               
Conread position:
               
141-700
               

               
Cow position:
               
chr18:44184938-44184377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
155-661
               

               
Cow position:
               
chr18:50098939-50099445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 54
               

               
Conread position:
               
155-699
               

               
Cow position:
               
chr18:50281638-50282182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
157-651
               

               
Cow position:
               
chr18:51400161-51400656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 168
               

               
Conread position:
               
158-581
               

               
Cow position:
               
chr18:56391380-56390957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
164, 172
               

               
Conread position:
               
160-692
               

               
Cow position:
               
chr18:50031014-50030479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
5, 70
               

               
Conread position:
               
164-692
               

               
Cow position:
               
chr18:50246050-50246578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 74
               

               
Conread position:
               
164-695
               

               
Cow position:
               
chr18:42837963-42837432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 239
               

               
Conread position:
               
171-445
               

               
Cow position:
               
chr18:51873683-51873954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
173-699
               

               
Cow position:
               
chr18:56248175-56247641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
174-543
               

               
Cow position:
               
chr18:40251073-40251434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
176-651
               

               
Cow position:
               
chr18:14454035-14453560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
408, 398
               

               
Conread position:
               
176-652
               

               
Cow position:
               
chr18:42985575-42985099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 149
               

               
Conread position:
               
177-690
               

               
Cow position:
               
chr18:42827390-42827903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 235
               

               
Conread position:
               
178-615
               

               
Cow position:
               
chr18:43048741-43048306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 142
               

               
Conread position:
               
178-702
               

               
Cow position:
               
chr18:50022587-50022060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
177, 203
               

               
Conread position:
               
179-692
               

               
Cow position:
               
chr18:33093118-33092605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
189-699
               

               
Cow position:
               
chr18:56316047-56316557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
228, 223
               

               
Conread position:
               
190-651
               

               
Cow position:
               
chr18:53571810-53572258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 61
               

               
Conread position:
               
191-440
               

               
Cow position:
               
chr18:40251562-40251807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
164, 76
               

               
Conread position:
               
192-699
               

               
Cow position:
               
chr18:49033382-49032874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
197-695
               

               
Cow position:
               
chr18:51400286-51400784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
154, 127
               

               
Conread position:
               
204-701
               

               
Cow position:
               
chr18:50295201-50295700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 210
               

               
Conread position:
               
209-686
               

               
Cow position:
               
chr18:40324866-40324390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 25
               

               
Conread position:
               
213-402
               

               
Cow position:
               
chr18:53572350-53572539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
139, 135
               

               
Conread position:
               
247-692
               

               
Cow position:
               
chr18:55497650-55497205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
331, 337
               

               
Conread position:
               
248-699
               

               
Cow position:
               
chr18:42675597-42675149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
251-700
               

               
Cow position:
               
chr18:50049251-50048798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 229
               

               
Conread position:
               
253-699
               

               
Cow position:
               
chr18:14454042-14453596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
331, 323
               

               
Conread position:
               
256-670
               

               
Cow position:
               
chr18:42827385-42827799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
329, 323
               

               
Conread position:
               
263-684
               

               
Cow position:
               
chr18:43048740-43048319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 321
               

               
Conread position:
               
268-670
               

               
Cow position:
               
chr18:14453295-14452895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 57
               

               
Conread position:
               
277-699
               

               
Cow position:
               
chr18:40324882-40324460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
299, 308
               

               
Conread position:
               
302-491
               

               
Cow position:
               
chr18:53572355-53572544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
302-643
               

               
Cow position:
               
chr18:40251119-40251451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
29, 47
               

               
Conread position:
               
306-543
               

               
Cow position:
               
chr18:43053428-43053191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
308-692
               

               
Cow position:
               
chr18:50281623-50282007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 48
               

               
Conread position:
               
323-699
               

               
Cow position:
               
chr18:50098939-50099315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
35, 54
               

               
Conread position:
               
326-570
               

               
Cow position:
               
chr18:55075139-55075384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
26, 22
               

               
Conread position:
               
331-700
               

               
Cow position:
               
chr18:52446912-52447283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
244, 254
               

               
Conread position:
               
332-695
               

               
Cow position:
               
chr18:41197548-41197911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
332-700
               

               
Cow position:
               
chr18:54966840-54967208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
253, 247
               

               
Conread position:
               
337-651
               

               
Cow position:
               
chr18:50251770-50252082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
236, 120
               

               
Conread position:
               
338-732
               

               
Cow position:
               
chr18:42827383-42827780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
237, 246
               

               
Conread position:
               
346-695
               

               
Cow position:
               
chr18:55497635-55497286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
347-700
               

               
Cow position:
               
chr18:42744729-42744376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
245, 231
               

               
Conread position:
               
350-690
               

               
Cow position:
               
chr18:44154463-44154120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
68, 62
               

               
Conread position:
               
351-699
               

               
Cow position:
               
chr18:42985568-42985220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
144, 137
               

               
Conread position:
               
351-700
               

               
Cow position:
               
chr18:54966775-54967124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 23
               

               
Conread position:
               
351-705
               

               
Cow position:
               
chr18:55017625-55017974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
352-700
               

               
Cow position:
               
chr18:14453295-14452947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
352-732
               

               
Cow position:
               
chr18:50250835-50251208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
224, 56
               

               
Conread position:
               
365-699
               

               
Cow position:
               
chr18:51400286-51400620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 47
               

               
Conread position:
               
368-700
               

               
Cow position:
               
chr18:41197501-41197832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
124, 5
               

               
Conread position:
               
375-703
               

               
Cow position:
               
chr18:53555189-53554861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
381-602
               

               
Cow position:
               
chr18:53572350-53572571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
383-684
               

               
Cow position:
               
chr18:55075112-55075414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
385-700
               

               
Cow position:
               
chr18:42837910-42837595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
416-700
               

               
Cow position:
               
chr18:53587110-53586826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
424-654
               

               
Cow position:
               
chr18:43023090-43022860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 86
               

               
Conread position:
               
430-651
               

               
Cow position:
               
chr18:43048741-43048521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
148, 154
               

               
Conread position:
               
441-700
               

               
Cow position:
               
chr18:49033385-49033125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
9, 137
               

               
Conread position:
               
443-692
               

               
Cow position:
               
chr18:40251562-40251807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
161, 71
               

               
Conread position:
               
457-683
               

               
Cow position:
               
chr18:41949334-41949108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
120, 127
               

               
Conread position:
               
514-692
               

               
Cow position:
               
chr18:43048741-43048563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
72, 58
               

               
Conread position:
               
515-690
               

               
Cow position:
               
chr18:41949360-41949185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 61
               
Show alignments to all cow chromosomes.