Cow genome map

Conread name: Ss1.1-rtes03_e2.5

Conread position: 1-653
Cow position:
Alignm length: 661
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 117

Conread position: 4-732
Cow position:
Alignm length: 738
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 102

Conread position: 5-454
Cow position:
Alignm length: 454
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 76

Conread position: 11-527
Cow position:
Alignm length: 520
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 149

Conread position: 12-368
Cow position:
Alignm length: 361
Alignm identity: 226
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 155, 150

Conread position: 12-452
Cow position:
Alignm length: 443
Alignm identity: 261
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 321, 57

Conread position: 12-566
Cow position:
Alignm length: 555
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 535, 0

Conread position: 12-630
Cow position:
Alignm length: 625
Alignm identity: 369
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 12, 323

Conread position: 12-699
Cow position:
Alignm length: 693
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 56

Conread position: 12-700
Cow position:
Alignm length: 692
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 68

Conread position: 12-705
Cow position:
Alignm length: 702
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 84

Conread position: 12-711
Cow position:
Alignm length: 712
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 71

Conread position: 16-533
Cow position:
Alignm length: 523
Alignm identity: 316
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 128, 203

Conread position: 16-660
Cow position:
Alignm length: 649
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 103

Conread position: 16-701
Cow position:
Alignm length: 691
Alignm identity: 411
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 196, 201

Conread position: 16-723
Cow position:
Alignm length: 721
Alignm identity: 450
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 144, 149

Conread position: 16-726
Cow position:
Alignm length: 715
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 65

Conread position: 17-570
Cow position:
Alignm length: 557
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 15

Conread position: 17-651
Cow position:
Alignm length: 642
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 61

Conread position: 17-653
Cow position:
Alignm length: 641
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 64

Conread position: 17-669
Cow position:
Alignm length: 655
Alignm identity: 389
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 55, 67

Conread position: 17-670
Cow position:
Alignm length: 660
Alignm identity: 397
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 54, 68

Conread position: 17-695
Cow position:
Alignm length: 686
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 73

Conread position: 17-699
Cow position:
Alignm length: 689
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 67

Conread position: 17-699
Cow position:
Alignm length: 689
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 64

Conread position: 17-701
Cow position:
Alignm length: 689
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 73

Conread position: 20-651
Cow position:
Alignm length: 637
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 145

Conread position: 23-630
Cow position:
Alignm length: 609
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 375

Conread position: 25-630
Cow position:
Alignm length: 610
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 140

Conread position: 26-536
Cow position:
Alignm length: 516
Alignm identity: 307
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 40

Conread position: 40-723
Cow position:
Alignm length: 692
Alignm identity: 406
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 256, 261

Conread position: 88-732
Cow position:
Alignm length: 648
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 613, 526

Conread position: 89-700
Cow position:
Alignm length: 616
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 62

Conread position: 94-699
Cow position:
Alignm length: 610
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 133

Conread position: 117-689
Cow position:
Alignm length: 574
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 461, 10

Conread position: 194-730
Cow position:
Alignm length: 546
Alignm identity: 341
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 45, 11

Conread position: 199-682
Cow position:
Alignm length: 487
Alignm identity: 292
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 265, 269

Conread position: 218-726
Cow position:
Alignm length: 515
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 178

Conread position: 264-722
Cow position:
Alignm length: 467
Alignm identity: 281
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 98, 109

Conread position: 284-656
Cow position:
Alignm length: 375
Alignm identity: 230
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 34

Conread position: 362-695
Cow position:
Alignm length: 335
Alignm identity: 205
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 40

Show alignments to all cow chromosomes.