Cow genome map
| Conread name: | Ss1.1-rtes03_e2.5 |
| Conread position: | 1-700 |
| Cow position: | chr24:17036151-17035452 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 76 |
| Conread position: | 2-530 |
| Cow position: | chr24:17070519-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 82 |
| Conread position: | 2-573 |
| Cow position: | chr24:17078033-17077463 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 227 |
| Conread position: | 4-700 |
| Cow position: | chr24:17035980-17035284 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 148 |
| Conread position: | 4-700 |
| Cow position: | chr24:17036064-17035368 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 38 |
| Conread position: | 12-279 |
| Cow position: | chr24:17013234-17013501 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-614 |
| Cow position: | chr24:17070445-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 353, 360 |
| Conread position: | 12-632 |
| Cow position: | chr24:17078107-17077488 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 520, 526 |
| Conread position: | 12-692 |
| Cow position: | chr24:17035720-17035040 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 140 |
| Conread position: | 12-695 |
| Cow position: | chr24:17035888-17035205 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 56 |
| Conread position: | 12-695 |
| Cow position: | chr24:17036476-17035793 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 72 |
| Conread position: | 12-699 |
| Cow position: | chr24:17036224-17035537 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 218 |
| Conread position: | 12-699 |
| Cow position: | chr24:17036308-17035621 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 400 |
| Conread position: | 12-702 |
| Cow position: | chr24:17035636-17034946 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 73 |
| Conread position: | 12-705 |
| Cow position: | chr24:17078275-17077582 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 193 |
| Conread position: | 12-732 |
| Cow position: | chr24:17036392-17035668 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 406, 400 |
| Conread position: | 13-702 |
| Cow position: | chr24:17078358-17077669 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 582, 565 |
| Conread position: | 15-703 |
| Cow position: | chr24:17035801-17035113 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 69 |
| Conread position: | 23-699 |
| Cow position: | chr24:17036547-17035873 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 8 |
| Conread position: | 47-388 |
| Cow position: | chr24:17013185-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 280, 272 |
| Conread position: | 50-695 |
| Cow position: | chr24:17078153-17077508 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 70 |
| Conread position: | 83-692 |
| Cow position: | chr24:17070432-17071041 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 329 |
| Conread position: | 109-472 |
| Cow position: | chr24:17013165-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 130, 19 |
| Conread position: | 155-700 |
| Cow position: | chr24:17070420-17070965 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 215-531 |
| Cow position: | chr24:17013185-17013501 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 137, 133 |
| Conread position: | 302-617 |
| Cow position: | chr24:17013188-17013503 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 382-700 |
| Cow position: | chr24:17036607-17036292 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 17 |
| Conread position: | 383-700 |
| Cow position: | chr24:17013185-17013502 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 35, 29 |
Show alignments to all cow chromosomes.