Cow genome map


           Conread name:
           Ss1.1-rtes03_e2.5
        

               Conread position:
               3-620
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 87
               

               Conread position:
               4-447
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-531
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               331
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               161, 151
               

               Conread position:
               5-343
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               84, 75
               

               Conread position:
               12-622
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 77
               

               Conread position:
               12-623
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 229
               

               Conread position:
               12-623
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 78
               

               Conread position:
               12-653
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               313, 307
               

               Conread position:
               12-693
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 216
               

               Conread position:
               12-699
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 72
               

               Conread position:
               13-620
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               368
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               225, 5
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 135
               

               Conread position:
               16-699
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 130
               

               Conread position:
               17-532
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 212
               

               Conread position:
               18-700
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 64
               

               Conread position:
               24-653
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 65
               

               Conread position:
               30-600
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               337
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               47, 60
               

               Conread position:
               38-700
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 30
               

               Conread position:
               38-726
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 113
               

               Conread position:
               41-683
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 120
               

               Conread position:
               48-700
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 53
               

               Conread position:
               83-651
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               347
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               76, 82
               

               Conread position:
               89-433
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               245, 233
               

               Conread position:
               167-695
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               334
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               249-699
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               169, 99
               

               Conread position:
               251-695
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               10, 20
               

               Conread position:
               317-651
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               48, 57
               

               Conread position:
               320-653
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               91, 97
               
Show alignments to all cow chromosomes.