Cow genome map
| Conread name: | Ss1.1-rtes03_e2.5 |
| Conread position: | 1-726 |
| Cow position: | chr8:45201161-45201888 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 224 |
| Conread position: | 2-625 |
| Cow position: | chr8:48407402-48406779 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 159 |
| Conread position: | 3-275 |
| Cow position: | chr8:46817114-46817386 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-449 |
| Cow position: | chr8:45201499-45201944 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 282 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 235, 225 |
| Conread position: | 4-429 |
| Cow position: | chr8:45201584-45202009 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 263 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 231, 224 |
| Conread position: | 4-701 |
| Cow position: | chr8:46816695-46817392 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 82 |
| Conread position: | 4-726 |
| Cow position: | chr8:46816191-46816915 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 86 |
| Conread position: | 5-617 |
| Cow position: | chr8:45201333-45201944 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 411, 407 |
| Conread position: | 5-670 |
| Cow position: | chr8:55580885-55581548 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 496, 475 |
| Conread position: | 10-701 |
| Cow position: | chr8:55580974-55581666 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 397 |
| Conread position: | 11-561 |
| Cow position: | chr8:55581143-55581693 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 404, 392 |
| Conread position: | 11-732 |
| Cow position: | chr8:46816282-46817007 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 406, 401 |
| Conread position: | 12-364 |
| Cow position: | chr8:55581396-55581748 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 70, 56 |
| Conread position: | 12-531 |
| Cow position: | chr8:55581228-55581747 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 216 |
| Conread position: | 12-607 |
| Cow position: | chr8:48406888-48406293 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 138 |
| Conread position: | 12-640 |
| Cow position: | chr8:48407140-48406512 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 65 |
| Conread position: | 12-669 |
| Cow position: | chr8:55581060-55581717 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 297 |
| Conread position: | 12-684 |
| Cow position: | chr8:45201256-45201928 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 339, 332 |
| Conread position: | 12-692 |
| Cow position: | chr8:48407476-48406796 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 217 |
| Conread position: | 12-697 |
| Cow position: | chr8:46816619-46817304 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 64 |
| Conread position: | 12-700 |
| Cow position: | chr8:46815944-46816635 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 375 |
| Conread position: | 13-732 |
| Cow position: | chr8:46816032-46816754 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 147 |
| Conread position: | 14-692 |
| Cow position: | chr8:48407558-48406880 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 402, 390 |
| Conread position: | 15-448 |
| Cow position: | chr8:55581315-55581748 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 275 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 149, 131 |
| Conread position: | 15-699 |
| Cow position: | chr8:46816370-46817054 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 407 |
| Conread position: | 15-699 |
| Cow position: | chr8:46816454-46817138 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 470, 480 |
| Conread position: | 15-700 |
| Cow position: | chr8:48407305-48406620 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 62 |
| Conread position: | 15-726 |
| Cow position: | chr8:46816118-46816831 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 65 |
| Conread position: | 16-699 |
| Cow position: | chr8:46816539-46817222 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 144 |
| Conread position: | 17-708 |
| Cow position: | chr8:48406967-48406274 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 135 |
| Conread position: | 18-726 |
| Cow position: | chr8:45200928-45201636 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 13 |
| Conread position: | 20-690 |
| Cow position: | chr8:55580816-55581486 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 208 |
| Conread position: | 23-653 |
| Cow position: | chr8:45201017-45201645 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 8 |
| Conread position: | 24-731 |
| Cow position: | chr8:48407630-48406921 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 23 |
| Conread position: | 46-653 |
| Cow position: | chr8:45200786-45201393 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 155 |
| Conread position: | 47-275 |
| Cow position: | chr8:6958059-6957831 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 48-630 |
| Cow position: | chr8:55580760-55581342 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 109-700 |
| Cow position: | chr8:55580736-55581328 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 131-533 |
| Cow position: | chr8:6958059-6957658 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 284, 0 |
| Conread position: | 164-700 |
| Cow position: | chr8:46815601-46816131 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 321 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 41, 33 |
| Conread position: | 215-640 |
| Cow position: | chr8:6958059-6957635 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 376, 275 |
| Conread position: | 350-663 |
| Cow position: | chr8:45200838-45201151 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 41 |
| Conread position: | 418-699 |
| Cow position: | chr8:48407658-48407377 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 22, 51 |
Show alignments to all cow chromosomes.