Cow genome map

Conread name: Ss1.1-rtes03_e2.5

Conread position: 1-726
Cow position:
Alignm length: 731
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 224

Conread position: 2-625
Cow position:
Alignm length: 627
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 159

Conread position: 3-275
Cow position:
Alignm length: 273
Alignm identity: 175
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-449
Cow position:
Alignm length: 448
Alignm identity: 282
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 235, 225

Conread position: 4-429
Cow position:
Alignm length: 427
Alignm identity: 263
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 231, 224

Conread position: 4-701
Cow position:
Alignm length: 703
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 82

Conread position: 4-726
Cow position:
Alignm length: 730
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 86

Conread position: 5-617
Cow position:
Alignm length: 615
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 411, 407

Conread position: 5-670
Cow position:
Alignm length: 668
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 496, 475

Conread position: 10-701
Cow position:
Alignm length: 696
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 397

Conread position: 11-561
Cow position:
Alignm length: 552
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 392

Conread position: 11-732
Cow position:
Alignm length: 730
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 401

Conread position: 12-364
Cow position:
Alignm length: 354
Alignm identity: 221
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 70, 56

Conread position: 12-531
Cow position:
Alignm length: 523
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 216

Conread position: 12-607
Cow position:
Alignm length: 599
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 138

Conread position: 12-640
Cow position:
Alignm length: 635
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 65

Conread position: 12-669
Cow position:
Alignm length: 662
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 297

Conread position: 12-684
Cow position:
Alignm length: 676
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 332

Conread position: 12-692
Cow position:
Alignm length: 683
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 217

Conread position: 12-697
Cow position:
Alignm length: 690
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 64

Conread position: 12-700
Cow position:
Alignm length: 696
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 375

Conread position: 13-732
Cow position:
Alignm length: 728
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 147

Conread position: 14-692
Cow position:
Alignm length: 681
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 402, 390

Conread position: 15-448
Cow position:
Alignm length: 435
Alignm identity: 275
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 149, 131

Conread position: 15-699
Cow position:
Alignm length: 688
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 407

Conread position: 15-699
Cow position:
Alignm length: 688
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 470, 480

Conread position: 15-700
Cow position:
Alignm length: 689
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 62

Conread position: 15-726
Cow position:
Alignm length: 718
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 65

Conread position: 16-699
Cow position:
Alignm length: 691
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 144

Conread position: 17-708
Cow position:
Alignm length: 701
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 135

Conread position: 18-726
Cow position:
Alignm length: 717
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 13

Conread position: 20-690
Cow position:
Alignm length: 674
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 208

Conread position: 23-653
Cow position:
Alignm length: 634
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 8

Conread position: 24-731
Cow position:
Alignm length: 715
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 23

Conread position: 46-653
Cow position:
Alignm length: 614
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 155

Conread position: 47-275
Cow position:
Alignm length: 229
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 48-630
Cow position:
Alignm length: 588
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 17

Conread position: 109-700
Cow position:
Alignm length: 595
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 38

Conread position: 131-533
Cow position:
Alignm length: 403
Alignm identity: 242
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 284, 0

Conread position: 164-700
Cow position:
Alignm length: 544
Alignm identity: 321
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 33

Conread position: 215-640
Cow position:
Alignm length: 428
Alignm identity: 262
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 376, 275

Conread position: 350-663
Cow position:
Alignm length: 322
Alignm identity: 209
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 56, 41

Conread position: 418-699
Cow position:
Alignm length: 286
Alignm identity: 181
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 51

Show alignments to all cow chromosomes.