Cow genome map
| Conread name: | Ss1.1-rtes08_i19.5 |
| Conread position: | 756-962 |
| Cow position: | chr10:32972894-32972682 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 64, 30 |
| Conread position: | 758-990 |
| Cow position: | chr10:18321800-18322024 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 63, 31 |
| Conread position: | 759-996 |
| Cow position: | chr10:51725171-51725418 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 21 |
| Conread position: | 762-962 |
| Cow position: | chr10:69619312-69619516 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 18 |
| Conread position: | 762-989 |
| Cow position: | chr10:2234956-2234723 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 763-995 |
| Cow position: | chr10:43667468-43667217 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 24, 232 |
| Conread position: | 764-971 |
| Cow position: | chr10:1204245-1204456 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 60, 27 |
| Conread position: | 764-991 |
| Cow position: | chr10:695521-695756 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 56, 27 |
| Conread position: | 764-996 |
| Cow position: | chr10:39605752-39605520 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 58, 16 |
| Conread position: | 765-941 |
| Cow position: | chr10:34704314-34704495 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 56, 21 |
| Conread position: | 765-989 |
| Cow position: | chr10:37983404-37983185 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 7, 25 |
| Conread position: | 765-989 |
| Cow position: | chr10:45877760-45877534 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 72, 23 |
| Conread position: | 765-992 |
| Cow position: | chr10:62626190-62625956 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 36, 24 |
| Conread position: | 766-975 |
| Cow position: | chr10:1036147-1036364 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 20 |
| Conread position: | 766-989 |
| Cow position: | chr10:39065665-39065887 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 23 |
| Conread position: | 766-989 |
| Cow position: | chr10:63485436-63485666 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 766-996 |
| Cow position: | chr10:46739033-46739282 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 768-985 |
| Cow position: | chr10:53745856-53745630 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 13, 180 |
| Conread position: | 771-985 |
| Cow position: | chr10:57751555-57751782 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 42, 157 |
| Conread position: | 771-989 |
| Cow position: | chr10:28257202-28256977 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 50, 18 |
| Conread position: | 790-942 |
| Cow position: | chr10:57856685-57856846 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 793-942 |
| Cow position: | chr10:61444029-61443871 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 117 |
| Conread position: | 793-954 |
| Cow position: | chr10:25218532-25218363 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 793-988 |
| Cow position: | chr10:68514259-68514467 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 794-989 |
| Cow position: | chr10:62846343-62846552 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 56 |
| Conread position: | 796-996 |
| Cow position: | chr10:36439910-36440122 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 25, 120 |
| Conread position: | 797-971 |
| Cow position: | chr10:40401860-40401680 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 84 |
| Conread position: | 798-990 |
| Cow position: | chr10:19180295-19180486 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 54 |
| Conread position: | 820-993 |
| Cow position: | chr10:804153-804327 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 821-971 |
| Cow position: | chr10:54257106-54256952 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 10, 140 |
| Conread position: | 821-988 |
| Cow position: | chr10:32617406-32617577 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 10, 125 |
| Conread position: | 821-990 |
| Cow position: | chr10:49868563-49868740 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 821-991 |
| Cow position: | chr10:35291637-35291814 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 11, 163 |
| Conread position: | 821-992 |
| Cow position: | chr10:17962905-17963082 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 69 |
| Conread position: | 822-962 |
| Cow position: | chr10:41768101-41768245 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 10, 128 |
| Conread position: | 834-996 |
| Cow position: | chr10:52744665-52744830 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 76 |
| Conread position: | 854-992 |
| Cow position: | chr10:23318060-23318197 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 134, 109 |
| Conread position: | 873-996 |
| Cow position: | chr10:26812136-26812255 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 36, 92 |
Show alignments to all cow chromosomes.