Cow genome map
| Conread name: | Ss1.1-rtes08_i19.5 |
| Conread position: | 745-971 |
| Cow position: | chr12:14490636-14490405 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 758-977 |
| Cow position: | chr12:36896827-36897045 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 55, 31 |
| Conread position: | 758-980 |
| Cow position: | chr12:4180606-4180373 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 6, 16 |
| Conread position: | 758-992 |
| Cow position: | chr12:33249813-33250051 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 8, 30 |
| Conread position: | 758-996 |
| Cow position: | chr12:45193086-45193326 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 98, 28 |
| Conread position: | 760-986 |
| Cow position: | chr12:37148353-37148580 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 762-987 |
| Cow position: | chr12:30235855-30236081 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 764-941 |
| Cow position: | chr12:45730515-45730697 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 26 |
| Conread position: | 764-978 |
| Cow position: | chr12:31154218-31154437 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 30, 122 |
| Conread position: | 764-990 |
| Cow position: | chr12:3130786-3131011 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 68, 39 |
| Conread position: | 764-991 |
| Cow position: | chr12:41874349-41874112 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 64, 24 |
| Conread position: | 765-942 |
| Cow position: | chr12:21136542-21136362 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 765-986 |
| Cow position: | chr12:9616757-9616536 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 67, 26 |
| Conread position: | 765-986 |
| Cow position: | chr12:29773451-29773228 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 765-989 |
| Cow position: | chr12:6461996-6462231 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 20, 203 |
| Conread position: | 765-995 |
| Cow position: | chr12:936884-937117 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 56, 26 |
| Conread position: | 774-996 |
| Cow position: | chr12:42335510-42335739 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 21, 34 |
| Conread position: | 780-966 |
| Cow position: | chr12:22015441-22015250 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 12, 101 |
| Conread position: | 785-992 |
| Cow position: | chr12:33001305-33001509 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 35, 44 |
| Conread position: | 788-996 |
| Cow position: | chr12:11831628-11831843 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 33, 15 |
| Conread position: | 795-962 |
| Cow position: | chr12:8118659-8118490 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 23 |
| Conread position: | 796-967 |
| Cow position: | chr12:34248000-34248177 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 796-986 |
| Cow position: | chr12:13216788-13216990 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 820-996 |
| Cow position: | chr12:26186406-26186591 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 821-962 |
| Cow position: | chr12:47868338-47868484 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 821-985 |
| Cow position: | chr12:26721048-26720881 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 65 |
| Conread position: | 822-996 |
| Cow position: | chr12:10678616-10678792 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 10, 89 |
| Conread position: | 829-995 |
| Cow position: | chr12:39187602-39187775 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 24, 154 |
Show alignments to all cow chromosomes.