Cow genome map
| Conread name: | Ss1.1-rtes08_i19.5 |
| Conread position: | 692-996 |
| Cow position: | chr16:3115234-3114919 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 100 |
| Conread position: | 754-986 |
| Cow position: | chr16:52946553-52946323 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 24 |
| Conread position: | 755-992 |
| Cow position: | chr16:27981138-27980898 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 10, 34 |
| Conread position: | 756-943 |
| Cow position: | chr16:11354257-11354449 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 67, 32 |
| Conread position: | 758-990 |
| Cow position: | chr16:54925712-54925482 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 74, 31 |
| Conread position: | 759-989 |
| Cow position: | chr16:18764498-18764729 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 32, 46 |
| Conread position: | 762-942 |
| Cow position: | chr16:42287657-42287842 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 61, 26 |
| Conread position: | 762-989 |
| Cow position: | chr16:2703047-2703279 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 29, 54 |
| Conread position: | 763-989 |
| Cow position: | chr16:33150035-33149804 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 25 |
| Conread position: | 763-996 |
| Cow position: | chr16:23873467-23873224 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 26 |
| Conread position: | 764-962 |
| Cow position: | chr16:40802117-40802320 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 25 |
| Conread position: | 764-963 |
| Cow position: | chr16:44754098-44753889 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 59, 25 |
| Conread position: | 764-965 |
| Cow position: | chr16:30039292-30039086 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 764-993 |
| Cow position: | chr16:38119864-38119625 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 57, 15 |
| Conread position: | 764-994 |
| Cow position: | chr16:47216988-47217223 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 57, 27 |
| Conread position: | 764-996 |
| Cow position: | chr16:31774494-31774265 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 765-980 |
| Cow position: | chr16:13411765-13411550 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 765-992 |
| Cow position: | chr16:23410222-23410459 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 765-995 |
| Cow position: | chr16:13351294-13351056 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 768-979 |
| Cow position: | chr16:51805229-51805450 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 23, 191 |
| Conread position: | 771-991 |
| Cow position: | chr16:42341493-42341260 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 45 |
| Conread position: | 792-992 |
| Cow position: | chr16:40665470-40665259 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 799-989 |
| Cow position: | chr16:598492-598686 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 800-986 |
| Cow position: | chr16:25933937-25933744 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 23, 44 |
| Conread position: | 804-989 |
| Cow position: | chr16:23007746-23007555 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 107 |
| Conread position: | 820-989 |
| Cow position: | chr16:31732394-31732223 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 10, 89 |
| Conread position: | 820-996 |
| Cow position: | chr16:34265048-34265236 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 13, 125 |
| Conread position: | 821-985 |
| Cow position: | chr16:47484577-47484740 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 11, 48 |
| Conread position: | 821-986 |
| Cow position: | chr16:13317525-13317353 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 821-989 |
| Cow position: | chr16:15996096-15995923 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 14, 146 |
| Conread position: | 821-992 |
| Cow position: | chr16:37576720-37576539 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 109 |
| Conread position: | 821-996 |
| Cow position: | chr16:52930574-52930387 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 829-987 |
| Cow position: | chr16:9409997-9410157 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 26, 149 |
| Conread position: | 838-986 |
| Cow position: | chr16:51983461-51983613 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 15, 117 |
| Conread position: | 854-996 |
| Cow position: | chr16:22766252-22766389 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 110, 0 |
Show alignments to all cow chromosomes.