Cow genome map
| Conread name: | Ss1.1-rtes08_i19.5 |
| Conread position: | 761-989 |
| Cow position: | chr17:6873771-6873543 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 30 |
| Conread position: | 762-962 |
| Cow position: | chr17:24158553-24158361 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 59, 30 |
| Conread position: | 764-961 |
| Cow position: | chr17:17558360-17558159 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 31, 15 |
| Conread position: | 765-989 |
| Cow position: | chr17:16887780-16887548 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 13, 25 |
| Conread position: | 766-996 |
| Cow position: | chr17:3277874-3278105 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 55, 14 |
| Conread position: | 767-989 |
| Cow position: | chr17:12654423-12654658 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 767-989 |
| Cow position: | chr17:38379495-38379721 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 54, 108 |
| Conread position: | 768-951 |
| Cow position: | chr17:1223292-1223104 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 20 |
| Conread position: | 790-990 |
| Cow position: | chr17:5196137-5195934 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 22, 144 |
| Conread position: | 793-985 |
| Cow position: | chr17:37984042-37984237 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 63 |
| Conread position: | 794-990 |
| Cow position: | chr17:17085892-17086085 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 56 |
| Conread position: | 794-992 |
| Cow position: | chr17:21895944-21896146 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 27, 8 |
| Conread position: | 796-986 |
| Cow position: | chr17:13387746-13387945 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 17, 187 |
| Conread position: | 804-946 |
| Cow position: | chr17:24096902-24096755 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 103 |
| Conread position: | 817-989 |
| Cow position: | chr17:1651034-1651213 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 10, 167 |
| Conread position: | 820-989 |
| Cow position: | chr17:33402282-33402106 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 821-954 |
| Cow position: | chr17:20638696-20638558 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 821-962 |
| Cow position: | chr17:34753224-34753368 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 16, 48 |
| Conread position: | 821-986 |
| Cow position: | chr17:657781-657950 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 140 |
| Conread position: | 821-989 |
| Cow position: | chr17:28523631-28523457 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 11, 91 |
| Conread position: | 821-996 |
| Cow position: | chr17:17568659-17568841 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 8 |
| Conread position: | 829-941 |
| Cow position: | chr17:37798457-37798341 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 851-987 |
| Cow position: | chr17:26387237-26387367 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 854-989 |
| Cow position: | chr17:4808110-4807973 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 108, 125 |
| Conread position: | 854-989 |
| Cow position: | chr17:9207194-9207059 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 118, 106 |
Show alignments to all cow chromosomes.