Cow genome map
| Conread name: | Ss1.1-rtes08_i19.5 |
| Conread position: | 748-989 |
| Cow position: | chr18:30022890-30022642 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 61 |
| Conread position: | 762-986 |
| Cow position: | chr18:13354297-13354072 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 762-995 |
| Cow position: | chr18:28965849-28965604 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 763-990 |
| Cow position: | chr18:9139676-9139448 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 90, 23 |
| Conread position: | 764-989 |
| Cow position: | chr18:27519667-27519899 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 59, 25 |
| Conread position: | 765-996 |
| Cow position: | chr18:32035444-32035683 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 768-996 |
| Cow position: | chr18:4000856-4000621 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 777-989 |
| Cow position: | chr18:29211412-29211190 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 36, 13 |
| Conread position: | 790-992 |
| Cow position: | chr18:24459960-24460173 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 792-962 |
| Cow position: | chr18:47929961-47930140 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 793-989 |
| Cow position: | chr18:23724676-23724469 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 22, 195 |
| Conread position: | 794-996 |
| Cow position: | chr18:19305016-19304801 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 802-968 |
| Cow position: | chr18:27233171-27233002 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 104 |
| Conread position: | 818-989 |
| Cow position: | chr18:26319124-26319300 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 35, 126 |
| Conread position: | 819-989 |
| Cow position: | chr18:16800339-16800514 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 129 |
| Conread position: | 819-995 |
| Cow position: | chr18:42562595-42562406 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 820-989 |
| Cow position: | chr18:42573653-42573479 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 11, 91 |
| Conread position: | 821-996 |
| Cow position: | chr18:36882543-36882725 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 822-989 |
| Cow position: | chr18:18792391-18792218 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 32, 161 |
| Conread position: | 822-989 |
| Cow position: | chr18:29784056-29784229 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 8, 111 |
| Conread position: | 822-994 |
| Cow position: | chr18:16250911-16250736 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 31, 60 |
| Conread position: | 823-976 |
| Cow position: | chr18:51555908-51555753 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 8, 90 |
| Conread position: | 824-996 |
| Cow position: | chr18:2969528-2969706 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 827-995 |
| Cow position: | chr18:50838881-50838708 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 5, 152 |
| Conread position: | 829-989 |
| Cow position: | chr18:22746881-22747046 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 60 |
| Conread position: | 849-965 |
| Cow position: | chr18:12808338-12808452 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 859-996 |
| Cow position: | chr18:11826328-11826189 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.