Cow genome map

Conread name: Ss1.1-rtes08_i19.5

Conread position: 748-989
Cow position: chr18:30022890-30022642 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 61

Conread position: 762-986
Cow position: chr18:13354297-13354072 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 59, 27

Conread position: 762-995
Cow position: chr18:28965849-28965604 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 26

Conread position: 763-990
Cow position: chr18:9139676-9139448 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 90, 23

Conread position: 764-989
Cow position: chr18:27519667-27519899 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 59, 25

Conread position: 765-996
Cow position: chr18:32035444-32035683 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 57

Conread position: 768-996
Cow position: chr18:4000856-4000621 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 53, 20

Conread position: 777-989
Cow position: chr18:29211412-29211190 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 13

Conread position: 790-992
Cow position: chr18:24459960-24460173 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 31, 0

Conread position: 792-962
Cow position: chr18:47929961-47930140 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 793-989
Cow position: chr18:23724676-23724469 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 195

Conread position: 794-996
Cow position: chr18:19305016-19304801 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 802-968
Cow position: chr18:27233171-27233002 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 104

Conread position: 818-989
Cow position: chr18:26319124-26319300 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 126

Conread position: 819-989
Cow position: chr18:16800339-16800514 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 129

Conread position: 819-995
Cow position: chr18:42562595-42562406 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 820-989
Cow position: chr18:42573653-42573479 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 91

Conread position: 821-996
Cow position: chr18:36882543-36882725 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 822-989
Cow position: chr18:18792391-18792218 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 32, 161

Conread position: 822-989
Cow position: chr18:29784056-29784229 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 8, 111

Conread position: 822-994
Cow position: chr18:16250911-16250736 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 31, 60

Conread position: 823-976
Cow position: chr18:51555908-51555753 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 8, 90

Conread position: 824-996
Cow position: chr18:2969528-2969706 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 827-995
Cow position: chr18:50838881-50838708 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 5, 152

Conread position: 829-989
Cow position: chr18:22746881-22747046 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 60

Conread position: 849-965
Cow position: chr18:12808338-12808452 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 859-996
Cow position: chr18:11826328-11826189 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 0

Show alignments to all cow chromosomes.