Cow genome map
| Conread name: | Ss1.1-rtes08_i19.5 |
| Conread position: | 763-969 |
| Cow position: | chr19:8862155-8861959 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 87, 25 |
| Conread position: | 763-996 |
| Cow position: | chr19:2216455-2216217 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 30, 61 |
| Conread position: | 763-996 |
| Cow position: | chr19:13663667-13663912 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 25, 36 |
| Conread position: | 764-991 |
| Cow position: | chr19:28926253-28926490 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 27, 223 |
| Conread position: | 765-995 |
| Cow position: | chr19:35980422-35980187 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 70, 56 |
| Conread position: | 767-979 |
| Cow position: | chr19:15826307-15826524 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 24, 38 |
| Conread position: | 770-989 |
| Cow position: | chr19:21862317-21862086 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 774-989 |
| Cow position: | chr19:39851051-39851266 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 79, 15 |
| Conread position: | 788-962 |
| Cow position: | chr19:6951447-6951268 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 14 |
| Conread position: | 788-989 |
| Cow position: | chr19:19295103-19295316 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 6 |
| Conread position: | 790-985 |
| Cow position: | chr19:23827336-23827540 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 792-989 |
| Cow position: | chr19:21784941-21785149 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 29, 196 |
| Conread position: | 793-995 |
| Cow position: | chr19:5088345-5088136 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 28, 123 |
| Conread position: | 794-989 |
| Cow position: | chr19:7779657-7779846 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 9 |
| Conread position: | 795-990 |
| Cow position: | chr19:2863846-2863644 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 797-989 |
| Cow position: | chr19:16826259-16826056 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 157 |
| Conread position: | 802-989 |
| Cow position: | chr19:24912664-24912859 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 820-962 |
| Cow position: | chr19:51402301-51402446 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 11, 68 |
| Conread position: | 820-965 |
| Cow position: | chr19:13465630-13465777 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 132 |
| Conread position: | 820-996 |
| Cow position: | chr19:51101628-51101447 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 51 |
| Conread position: | 821-986 |
| Cow position: | chr19:45148549-45148718 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 16, 111 |
| Conread position: | 821-989 |
| Cow position: | chr19:25891551-25891725 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 118 |
| Conread position: | 821-996 |
| Cow position: | chr19:7027765-7027585 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 83 |
| Conread position: | 823-995 |
| Cow position: | chr19:16058849-16058670 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 9, 44 |
| Conread position: | 824-989 |
| Cow position: | chr19:42343082-42342908 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 128 |
| Conread position: | 829-989 |
| Cow position: | chr19:2446403-2446566 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 14 |
| Conread position: | 837-989 |
| Cow position: | chr19:20063235-20063085 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 851-996 |
| Cow position: | chr19:40967557-40967404 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 96, 0 |
Show alignments to all cow chromosomes.