Cow genome map

Conread name: Ss1.1-rtes08_i19.5

Conread position: 756-989
Cow position: chr2:876512-876752 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 67, 32

Conread position: 759-996
Cow position: chr2:7386142-7385906 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 69, 30

Conread position: 760-986
Cow position: chr2:36097894-36097660 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 28

Conread position: 762-985
Cow position: chr2:19833161-19833389 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 24

Conread position: 762-986
Cow position: chr2:63776281-63776056 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 136

Conread position: 762-995
Cow position: chr2:8996819-8997062 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 59, 182

Conread position: 763-989
Cow position: chr2:31379081-31378843 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 25

Conread position: 764-989
Cow position: chr2:14604198-14604422 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 68, 25

Conread position: 764-992
Cow position: chr2:10798638-10798396 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 15

Conread position: 765-989
Cow position: chr2:39649794-39650035 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 24

Conread position: 765-992
Cow position: chr2:16141008-16140769 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 55, 24

Conread position: 765-995
Cow position: chr2:10110853-10110626 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 19

Conread position: 765-995
Cow position: chr2:64107448-64107209 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 19

Conread position: 766-962
Cow position: chr2:43487454-43487655 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 23

Conread position: 766-989
Cow position: chr2:6953805-6954037 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 64

Conread position: 767-992
Cow position: chr2:32977179-32977406 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 54, 22

Conread position: 767-995
Cow position: chr2:55038311-55038540 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 118

Conread position: 770-981
Cow position: chr2:40475064-40475275 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 169
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 52, 18

Conread position: 772-994
Cow position: chr2:42305113-42305353 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 19, 138

Conread position: 782-989
Cow position: chr2:33830438-33830656 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 785-996
Cow position: chr2:63193234-63193450 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 5

Conread position: 788-989
Cow position: chr2:53351183-53351394 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 16, 122

Conread position: 790-962
Cow position: chr2:46386603-46386781 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 114

Conread position: 790-963
Cow position: chr2:24719672-24719855 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 155

Conread position: 790-986
Cow position: chr2:45300383-45300584 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 23, 173

Conread position: 792-986
Cow position: chr2:9328576-9328774 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 171

Conread position: 793-943
Cow position: chr2:16483240-16483398 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 793-972
Cow position: chr2:20379210-20379025 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 163

Conread position: 793-994
Cow position: chr2:14923569-14923360 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 36, 158

Conread position: 796-989
Cow position: chr2:38965242-38965039 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 112

Conread position: 803-965
Cow position: chr2:33012309-33012479 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 803-990
Cow position: chr2:16037963-16037767 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 18, 161

Conread position: 820-989
Cow position: chr2:62252298-62252122 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 11, 164

Conread position: 820-996
Cow position: chr2:6320479-6320661 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 39

Conread position: 821-959
Cow position: chr2:38954173-38954028 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 821-962
Cow position: chr2:11962596-11962453 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 11, 109

Conread position: 821-986
Cow position: chr2:79446936-79447094 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 33

Conread position: 821-989
Cow position: chr2:1222558-1222388 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 12, 54

Conread position: 821-990
Cow position: chr2:69871849-69872029 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 72

Conread position: 821-995
Cow position: chr2:6351191-6351375 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 823-973
Cow position: chr2:12549814-12549657 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 128
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 823-985
Cow position: chr2:28012048-28011888 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 19

Conread position: 830-995
Cow position: chr2:83939691-83939854 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 70

Conread position: 851-989
Cow position: chr2:75845718-75845579 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 110, 127

Show alignments to all cow chromosomes.