Cow genome map
| Conread name: | Ss1.1-rtes08_i19.5 |
| Conread position: | 756-996 |
| Cow position: | chr21:8381794-8381541 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 761-996 |
| Cow position: | chr21:24089768-24090016 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 32, 47 |
| Conread position: | 762-992 |
| Cow position: | chr21:4261616-4261855 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 764-990 |
| Cow position: | chr21:34167413-34167175 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 226 |
| Conread position: | 764-992 |
| Cow position: | chr21:30171341-30171102 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 68, 30 |
| Conread position: | 765-985 |
| Cow position: | chr21:6690522-6690299 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 58, 23 |
| Conread position: | 765-996 |
| Cow position: | chr21:8176439-8176204 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 23 |
| Conread position: | 766-995 |
| Cow position: | chr21:9446234-9446472 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 55, 41 |
| Conread position: | 766-995 |
| Cow position: | chr21:37310605-37310823 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 767-989 |
| Cow position: | chr21:41540415-41540187 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 56, 21 |
| Conread position: | 768-986 |
| Cow position: | chr21:45450585-45450810 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 53, 21 |
| Conread position: | 797-989 |
| Cow position: | chr21:38863587-38863388 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 35, 187 |
| Conread position: | 799-991 |
| Cow position: | chr21:32334019-32334213 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 115 |
| Conread position: | 820-986 |
| Cow position: | chr21:36952606-36952776 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 11, 91 |
| Conread position: | 820-989 |
| Cow position: | chr21:12450597-12450770 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 101 |
| Conread position: | 820-996 |
| Cow position: | chr21:38926619-38926805 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 821-989 |
| Cow position: | chr21:33196422-33196596 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 11, 48 |
| Conread position: | 821-989 |
| Cow position: | chr21:42907207-42907033 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 162 |
| Conread position: | 821-991 |
| Cow position: | chr21:3210907-3210732 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 821-991 |
| Cow position: | chr21:18080271-18080449 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 821-996 |
| Cow position: | chr21:34416107-34415934 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 13, 119 |
| Conread position: | 822-996 |
| Cow position: | chr21:29868367-29868542 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 9, 136 |
| Conread position: | 824-989 |
| Cow position: | chr21:10796148-10796319 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 64 |
| Conread position: | 827-986 |
| Cow position: | chr21:16800210-16800368 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 93 |
| Conread position: | 829-992 |
| Cow position: | chr21:17384277-17384115 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 123, 19 |
| Conread position: | 853-996 |
| Cow position: | chr21:907888-908031 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 114, 54 |
Show alignments to all cow chromosomes.