Cow genome map

Conread name: Ss1.1-rtes08_i19.5

Conread position: 748-986
Cow position: chr25:381516-381756 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 41

Conread position: 759-995
Cow position: chr25:10945946-10946178 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 106, 39

Conread position: 764-986
Cow position: chr25:18514977-18515192 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 24

Conread position: 764-992
Cow position: chr25:36929329-36929565 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 110

Conread position: 765-954
Cow position: chr25:16472667-16472481 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 23

Conread position: 765-960
Cow position: chr25:12506438-12506637 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 25

Conread position: 766-996
Cow position: chr25:7019584-7019828 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 772-989
Cow position: chr25:12343239-12343016 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 51, 17

Conread position: 787-985
Cow position: chr25:36651985-36651777 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 87

Conread position: 793-965
Cow position: chr25:19384907-19384719 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 180

Conread position: 793-966
Cow position: chr25:38138435-38138617 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 116

Conread position: 793-986
Cow position: chr25:21292598-21292792 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 167

Conread position: 819-989
Cow position: chr25:35088930-35088755 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 92

Conread position: 820-990
Cow position: chr25:12880835-12880663 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 9

Conread position: 820-993
Cow position: chr25:12178981-12178798 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 821-941
Cow position: chr25:14283969-14283847 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 821-985
Cow position: chr25:32775963-32775792 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 821-989
Cow position: chr25:15460276-15460102 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 10, 111

Conread position: 821-992
Cow position: chr25:9565798-9565618 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 165

Conread position: 821-993
Cow position: chr25:15322791-15322971 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 821-994
Cow position: chr25:24103368-24103185 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 10, 42

Conread position: 821-996
Cow position: chr25:16706194-16706378 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 11, 116

Conread position: 823-989
Cow position: chr25:5766735-5766903 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 88

Conread position: 823-996
Cow position: chr25:32439122-32438943 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 829-991
Cow position: chr25:8841468-8841304 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 82

Conread position: 850-992
Cow position: chr25:8457512-8457375 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 854-996
Cow position: chr25:16897170-16897313 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 95, 52

Show alignments to all cow chromosomes.