Cow genome map
| Conread name: | Ss1.1-rtes08_i19.5 |
| Conread position: | 746-995 |
| Cow position: | chr4:25703289-25703035 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 7, 61 |
| Conread position: | 758-971 |
| Cow position: | chr4:48729195-48729415 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 57, 28 |
| Conread position: | 762-989 |
| Cow position: | chr4:51863564-51863798 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 61, 26 |
| Conread position: | 762-990 |
| Cow position: | chr4:41389217-41389451 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 763-968 |
| Cow position: | chr4:23734506-23734717 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 69, 25 |
| Conread position: | 763-996 |
| Cow position: | chr4:26136174-26135931 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 48 |
| Conread position: | 764-996 |
| Cow position: | chr4:61522136-61521894 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 57, 25 |
| Conread position: | 765-967 |
| Cow position: | chr4:62172561-62172365 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 196, 23 |
| Conread position: | 765-986 |
| Cow position: | chr4:27404102-27403882 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 87, 24 |
| Conread position: | 765-989 |
| Cow position: | chr4:4372081-4372305 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 10, 25 |
| Conread position: | 765-995 |
| Cow position: | chr4:6276401-6276162 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 765-996 |
| Cow position: | chr4:3122763-3123002 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 59, 24 |
| Conread position: | 765-996 |
| Cow position: | chr4:23541232-23540990 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 768-972 |
| Cow position: | chr4:33943480-33943690 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 30, 145 |
| Conread position: | 768-986 |
| Cow position: | chr4:35833755-35833539 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 60, 28 |
| Conread position: | 768-989 |
| Cow position: | chr4:24857529-24857306 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 21 |
| Conread position: | 790-992 |
| Cow position: | chr4:50824235-50824030 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 184 |
| Conread position: | 795-989 |
| Cow position: | chr4:58506204-58505999 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 158 |
| Conread position: | 798-996 |
| Cow position: | chr4:42874156-42873944 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 804-960 |
| Cow position: | chr4:65730277-65730122 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 46, 16 |
| Conread position: | 820-989 |
| Cow position: | chr4:5136352-5136528 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 33, 164 |
| Conread position: | 820-989 |
| Cow position: | chr4:53354281-53354106 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 11, 120 |
| Conread position: | 820-996 |
| Cow position: | chr4:22837746-22837922 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 12, 91 |
| Conread position: | 821-989 |
| Cow position: | chr4:27745034-27744864 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 90 |
| Conread position: | 821-989 |
| Cow position: | chr4:63004788-63004964 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 11, 164 |
| Conread position: | 821-996 |
| Cow position: | chr4:53822854-53822676 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 10, 61 |
| Conread position: | 822-986 |
| Cow position: | chr4:50835952-50836115 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 11, 54 |
| Conread position: | 829-985 |
| Cow position: | chr4:36710410-36710248 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.