Cow genome map
| Conread name: | Ss1.1-rtes08_i19.5 |
| Conread position: | 756-989 |
| Cow position: | chrX:21823128-21823369 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 10, 34 |
| Conread position: | 757-986 |
| Cow position: | chrX:2398032-2398271 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 66, 174 |
| Conread position: | 762-995 |
| Cow position: | chrX:13035520-13035770 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 51, 29 |
| Conread position: | 763-984 |
| Cow position: | chrX:4264823-4265051 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 763-986 |
| Cow position: | chrX:36752672-36752444 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 58, 10 |
| Conread position: | 764-989 |
| Cow position: | chrX:3521527-3521758 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 765-989 |
| Cow position: | chrX:13851199-13850974 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 21 |
| Conread position: | 765-992 |
| Cow position: | chrX:4435918-4436151 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 26, 46 |
| Conread position: | 765-996 |
| Cow position: | chrX:11689761-11689989 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 765-996 |
| Cow position: | chrX:22865605-22865849 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 766-979 |
| Cow position: | chrX:17822058-17822277 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 66, 54 |
| Conread position: | 766-991 |
| Cow position: | chrX:36837070-36837301 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 25, 152 |
| Conread position: | 780-989 |
| Cow position: | chrX:6857083-6857303 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 12, 208 |
| Conread position: | 782-985 |
| Cow position: | chrX:7661903-7661690 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 10, 130 |
| Conread position: | 793-989 |
| Cow position: | chrX:2874134-2874334 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 32, 44 |
| Conread position: | 793-989 |
| Cow position: | chrX:20875415-20875209 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 28, 160 |
| Conread position: | 794-989 |
| Cow position: | chrX:25788950-25789153 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 820-996 |
| Cow position: | chrX:28809959-28809772 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 821-986 |
| Cow position: | chrX:14815222-14815058 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 10, 107 |
| Conread position: | 821-992 |
| Cow position: | chrX:16954130-16953952 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 49 |
| Conread position: | 821-995 |
| Cow position: | chrX:21621996-21621818 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 11, 140 |
| Conread position: | 822-986 |
| Cow position: | chrX:41811439-41811270 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 60 |
| Conread position: | 823-989 |
| Cow position: | chrX:36067462-36067292 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 8, 88 |
| Conread position: | 827-989 |
| Cow position: | chrX:4198825-4198994 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 15, 79 |
| Conread position: | 844-995 |
| Cow position: | chrX:1176768-1176918 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 100 |
Show alignments to all cow chromosomes.