Cow genome map
| Conread name: | Ss1.1-rtes14_b13.5 |
| Conread position: | 1-225 |
| Cow position: | chr17:22473749-22473973 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 178, 51 |
| Conread position: | 1-256 |
| Cow position: | chr17:22551765-22551511 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 109, 57 |
| Conread position: | 1-275 |
| Cow position: | chr17:22552185-22551910 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 68, 57 |
| Conread position: | 1-290 |
| Cow position: | chr17:22452386-22452096 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 266, 54 |
| Conread position: | 1-296 |
| Cow position: | chr17:22452302-22452006 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 260, 57 |
| Conread position: | 1-296 |
| Cow position: | chr17:22552521-22552225 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 271, 55 |
| Conread position: | 1-297 |
| Cow position: | chr17:22499316-22499019 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 268, 54 |
| Conread position: | 1-297 |
| Cow position: | chr17:22553025-22552728 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 264, 43 |
| Conread position: | 1-299 |
| Cow position: | chr17:22451966-22451666 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 177, 62 |
| Conread position: | 1-305 |
| Cow position: | chr17:22589939-22589634 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 268, 67 |
| Conread position: | 1-309 |
| Cow position: | chr17:22551849-22551540 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 63, 57 |
| Conread position: | 1-309 |
| Cow position: | chr17:22552437-22552128 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 57, 68 |
| Conread position: | 1-309 |
| Cow position: | chr17:22552857-22552548 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 68, 47 |
| Conread position: | 1-309 |
| Cow position: | chr17:22552941-22552632 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 268, 47 |
| Conread position: | 1-309 |
| Cow position: | chr17:22590191-22589882 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 223, 57 |
| Conread position: | 1-314 |
| Cow position: | chr17:22589855-22589541 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 268, 49 |
| Conread position: | 1-328 |
| Cow position: | chr17:22499148-22498820 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 265, 50 |
| Conread position: | 1-328 |
| Cow position: | chr17:22499232-22498904 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 220 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 268, 54 |
| Conread position: | 1-328 |
| Cow position: | chr17:22552017-22551689 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 267, 47 |
| Conread position: | 2-270 |
| Cow position: | chr17:22552604-22552337 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 2-270 |
| Cow position: | chr17:22590022-22589755 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 132, 56 |
| Conread position: | 2-275 |
| Cow position: | chr17:22473414-22473684 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 2-296 |
| Cow position: | chr17:22473498-22473793 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 266, 56 |
| Conread position: | 2-296 |
| Cow position: | chr17:22552100-22551805 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 267, 70 |
| Conread position: | 2-296 |
| Cow position: | chr17:22552772-22552477 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 266, 56 |
| Conread position: | 2-300 |
| Cow position: | chr17:22473666-22473966 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 259, 50 |
| Conread position: | 2-309 |
| Cow position: | chr17:22589770-22589462 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 266, 56 |
| Conread position: | 2-314 |
| Cow position: | chr17:22552352-22552039 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 71, 56 |
| Conread position: | 2-314 |
| Cow position: | chr17:22590106-22589793 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 45, 56 |
| Conread position: | 4-324 |
| Cow position: | chr17:22499061-22498740 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 265, 48 |
| Conread position: | 5-296 |
| Cow position: | chr17:22473585-22473877 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 263, 53 |
| Conread position: | 6-296 |
| Cow position: | chr17:22473334-22473625 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 262, 57 |
| Conread position: | 8-316 |
| Cow position: | chr17:22590268-22589959 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 261, 44 |
| Conread position: | 8-328 |
| Cow position: | chr17:22499393-22499072 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 264, 64 |
| Conread position: | 11-218 |
| Cow position: | chr17:22452040-22451834 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 57, 40 |
| Conread position: | 14-296 |
| Cow position: | chr17:22452121-22451838 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 255, 44 |
| Conread position: | 14-328 |
| Cow position: | chr17:22498883-22498568 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 251, 38 |
| Conread position: | 72-296 |
| Cow position: | chr17:22452400-22452174 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 196, 0 |
Show alignments to all cow chromosomes.