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Cow genome map

           
Conread name:
           
Ss1.1-rtes14_b13.5
        

               
Conread position:
               
1-174
               

               
Cow position:
               
chr18:42743965-42743793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr18:42837268-42837095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr18:44240677-44240857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr18:14453040-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr18:43053379-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr18:44153874-44153667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
146, 50
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr18:40085856-40085641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
117, 62
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr18:51812132-51811904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr18:44253152-44252905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:40075439-40075690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr18:42791296-42791550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr18:42791212-42791469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
136, 52
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr18:42827652-42827914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
215, 57
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr18:43174772-43174507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
116, 57
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr18:44153952-44153693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
240, 63
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr18:50849087-50849352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
155, 51
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr18:51752171-51751906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr18:51765330-51765065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr18:51789561-51789296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
210, 57
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr18:40306333-40306601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
221, 50
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr18:44397771-44397503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr18:50059123-50058855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
231, 57
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr18:52448112-52448381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
183, 50
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr18:44184218-44183949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 62
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr18:52428721-52428992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr18:52433902-52434173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr18:40086266-40085987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
110, 58
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr18:44154371-44154082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 51
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr18:33063850-33063562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
108, 52
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:42960051-42959759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:43120075-43119784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
268, 66
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:50083530-50083821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
131, 57
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:53498473-53498763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
231, 57
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr18:44253811-44253518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 52
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr18:49032798-49032505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
264, 54
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:40306837-40307133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
155, 63
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:40324804-40324508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
270, 50
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:41197739-41198035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
232, 57
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:41198159-41198455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
271, 60
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:41198327-41198623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
152, 57
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:41198411-41198707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
267, 60
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:42744553-42744257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 51
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:42791800-42792096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
133, 57
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:42792136-42792432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
268, 57
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:42792304-42792600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
274, 50
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:42985396-42985100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 54
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:43093338-43093042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
263, 51
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:43093422-43093126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
64, 57
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:44397855-44397559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
267, 54
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:50058871-50058575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
231, 50
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:50099475-50099771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
122, 62
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:52447524-52447820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
267, 66
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:52447860-52448156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
268, 57
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:53498307-53498600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
272, 51
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:56316213-56316509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
264, 51
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:33064690-33064393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 54
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:40086856-40086563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
259, 57
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:40086940-40086646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:40324300-40324003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
260, 63
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:41949100-41948803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 57
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:42744217-42743920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 51
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:42744301-42744004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 57
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:42744469-42744172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 57
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:42792388-42792685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
72, 57
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:42959799-42959511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
267, 48
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:42960303-42960006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
277, 52
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:42960546-42960258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:42985480-42985183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 57
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:43022487-43022190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 50
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:43022571-43022274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 62
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:43048648-43048351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 57
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:43120159-43119862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 57
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:44154203-44153907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 50
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:44154458-44154158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:44184302-44184005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 49
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:44184554-44184257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 52
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:44184638-44184341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 50
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:44184722-44184425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 50
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:44184806-44184509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 50
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:44239837-44240134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 57
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:44240089-44240386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 57
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:44253895-44253598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 57
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:44398275-44397978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
268, 57
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:44398359-44398062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
220, 57
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:51368186-51367890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 70
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:51368354-51368057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
268, 57
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:51765918-51765621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
210, 50
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:51812552-51812255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
71, 57
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:51839229-51838932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
268, 50
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:51969505-51969800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
274, 50
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:52428637-52428934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 50
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:52433818-52434115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
267, 50
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:52447188-52447485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
264, 57
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:52447440-52447737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
264, 57
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:52448028-52448326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
260, 57
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:53560174-53560471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
133, 62
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:40085940-40085642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
133, 52
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:42837520-42837223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 50
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:42984976-42984679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 67
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:42985312-42985015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:43022739-43022442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 57
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:43175024-43174727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 49
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:44397939-44397642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
110, 57
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:50083782-50084080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
155, 60
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:52428469-52428769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 51
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:52433314-52433614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 57
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:52433650-52433950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 50
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr18:41948680-41948378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 50
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr18:52433230-52433533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
268, 63
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr18:41197907-41198212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
267, 50
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr18:42791128-42791433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
72, 47
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr18:50099811-50100117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
72, 62
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr18:52428049-52428355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
63, 49
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:1418250-1418558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
268, 57
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:51752255-51751947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr18:1417998-1418307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
176, 47
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr18:1418082-1418391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
95, 50
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr18:41198495-41198800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr18:42790960-42791269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
270, 57
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr18:42792052-42792361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
277, 57
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr18:42792556-42792865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
274, 50
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr18:43093170-43092861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
268, 47
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr18:43175360-43175049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 49
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr18:44253320-44253012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 53
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr18:44253643-44253335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 57
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr18:50848331-50848640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
149, 57
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr18:50848499-50848808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
264, 47
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr18:52427713-52428022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
268, 57
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr18:41197655-41197965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
268, 54
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr18:51789225-51788915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
272, 52
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr18:42791884-42792198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
268, 57
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr18:43093674-43093360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
268, 51
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr18:51368102-51367789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
277, 57
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr18:51752003-51751689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
287, 50
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr18:51812468-51812154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
117, 52
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr18:51812636-51812322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
156, 50
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr18:51812300-51811985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
116, 57
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr18:41197823-41198140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
63, 48
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr18:43168040-43168357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
268, 57
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr18:41948848-41948528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 50
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr18:52427965-52428285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
132, 50
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr18:52428217-52428537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 50
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr18:52428301-52428621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 49
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr18:52433398-52433718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 50
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr18:52433482-52433802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 62
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr18:52447692-52448013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
268, 57
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr18:41198075-41198399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
267, 62
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr18:41948932-41948608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 57
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr18:43022403-43022079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 50
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr18:52433062-52433386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
268, 57
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr18:52428385-52428712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 57
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr18:52433566-52433893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 57
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:41949016-41948688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 50
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:41949184-41948856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 50
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:42674737-42674409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
274, 52
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:42674905-42674577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
267, 57
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:42984892-42984564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 51
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:43093086-43092760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
149, 43
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:43093590-43093262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
268, 60
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:43119907-43119579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 43
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:43119991-43119663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 62
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:43120243-43119915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 52
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:43174940-43174612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 48
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:44184470-44184142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 50
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:44240257-44240585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 62
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:44253727-44253399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 51
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:44398023-44397695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
267, 50
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:44398107-44397779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
268, 66
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:44398191-44397863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 54
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:52447608-52447936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
264, 57
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:52447776-52448104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
268, 66
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:52447944-52448272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 62
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr18:51789477-51789148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
268, 50
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr18:51812720-51812391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
268, 57
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr18:44240341-44240673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 50
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr18:41198243-41198580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 54
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr18:43022991-43022657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 57
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr18:41948596-41948134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 50
               

               
Conread position:
               
2-214
               

               
Cow position:
               
chr18:33092773-33092562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
2-214
               

               
Cow position:
               
chr18:56128202-56128413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
154, 49
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr18:56494261-56494500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr18:50295437-50295690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 58
               

               
Conread position:
               
2-257
               

               
Cow position:
               
chr18:53498557-53498811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
132, 51
               

               
Conread position:
               
2-258
               

               
Cow position:
               
chr18:43174687-43174441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
150, 49
               

               
Conread position:
               
2-259
               

               
Cow position:
               
chr18:42675072-42674816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
2-259
               

               
Cow position:
               
chr18:43048563-43048309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 51
               

               
Conread position:
               
2-259
               

               
Cow position:
               
chr18:51400781-51401037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
62, 56
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr18:42837351-42837092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr18:51969422-51969681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr18:53635963-53635702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr18:14453123-14452856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr18:42791717-42791984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
216, 61
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:43168293-43168559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
63, 47
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr18:50245990-50246281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr18:49033049-49032757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
263, 46
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr18:53509319-53509613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 53
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:33063933-33063638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
266, 50
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:33064101-33063806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
69, 51
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:33064437-33064142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
155, 50
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:33064521-33064226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
270, 48
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:40075188-40075483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
216, 48
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:42674988-42674693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
267, 61
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:42791465-42791760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
259, 56
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:42827569-42827864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
266, 56
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:49022727-49023022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
109, 56
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:50048638-50048343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
269, 56
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:50048722-50048427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 59
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:50083867-50084162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
71, 59
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:50848836-50849131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
71, 49
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:50849004-50849299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
151, 56
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:52012278-52011983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
135, 43
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:53610218-53609923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
151, 46
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:54979641-54979936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
151, 49
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:55067029-55066734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 49
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:56329182-56328887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
263, 56
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:56329518-56329223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
263, 60
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:56494093-56494388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
132, 56
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:14453939-14453643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
270, 48
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:33064353-33064057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
69, 47
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:33064605-33064309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
270, 51
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:40075104-40075400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:40306670-40306966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
266, 42
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:41949351-41949055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
267, 49
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:42674820-42674525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
270, 51
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:42744384-42744088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 56
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:42792221-42792517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
267, 61
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:42837435-42837139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 50
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:42837687-42837391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 56
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:42837771-42837475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 50
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:43175443-43175147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 50
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:43175527-43175231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 48
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:50059290-50058994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
138, 51
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:50848752-50849048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
263, 70
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:51400697-51400993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
70, 56
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:51752086-51751790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
267, 56
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:51766084-51765789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
267, 6
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:53509403-53509699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
216, 48
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:53635291-53634995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
271, 49
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:55008640-55008936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
264, 49
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:55018045-55018341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 49
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:56128538-56128834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
266, 54
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr18:40086433-40086139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
269, 49
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr18:40306586-40306883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
137, 49
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr18:41949267-41948971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 49
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr18:42744132-42743836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 56
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr18:42985227-42984931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
266, 56
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr18:43175107-43174810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 49
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr18:49032965-49032669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
276, 49
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr18:55523557-55523856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
49, 60
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr18:40306754-40307054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
266, 49
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr18:52012026-52011726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
155, 49
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr18:55018129-55018428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
259, 61
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr18:52012362-52012061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
71, 56
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr18:53635459-53635156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
263, 70
               

               
Conread position:
               
2-305
               

               
Cow position:
               
chr18:50049142-50048838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
214, 59
               

               
Conread position:
               
2-305
               

               
Cow position:
               
chr18:50099896-50100201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
144, 51
               

               
Conread position:
               
2-305
               

               
Cow position:
               
chr18:53586834-53586530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
230, 49
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr18:55018381-55018686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
267, 50
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr18:33064185-33063878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
152, 51
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr18:33092941-33092634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
71, 51
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr18:43168125-43168432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
266, 61
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr18:53560427-53560734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
219, 61
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr18:33093025-33092717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
267, 62
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr18:42791969-42792277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
265, 56
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr18:43048731-43048423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 50
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr18:50848920-50849228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 56
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr18:43168209-43168522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
62, 46
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr18:49032461-49032148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
276, 56
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr18:50083699-50084012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
66, 56
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr18:50083951-50084264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
63, 47
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr18:50848584-50848897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
194, 61
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr18:51789392-51789079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
155, 59
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr18:53586918-53586605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
137, 56
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr18:33064017-33063704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
62, 47
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr18:53525773-53526089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 53
               

               
Conread position:
               
2-318
               

               
Cow position:
               
chr18:53635543-53635226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
154, 56
               

               
Conread position:
               
2-318
               

               
Cow position:
               
chr18:56128622-56128939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
151, 56
               

               
Conread position:
               
2-318
               

               
Cow position:
               
chr18:56316130-56316447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
263, 59
               

               
Conread position:
               
2-320
               

               
Cow position:
               
chr18:49032881-49032562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
154, 60
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr18:50059206-50058884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
53, 64
               

               
Conread position:
               
2-327
               

               
Cow position:
               
chr18:50099224-50099550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 59
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr18:40324635-40324308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 49
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr18:41197992-41198319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
267, 64
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr18:42675156-42674829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
266, 49
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr18:42827485-42827812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
266, 46
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr18:42837603-42837276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 56
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr18:43175191-43174864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 48
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr18:44253974-44253651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
132, 49
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr18:49032629-49032302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
276, 60
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr18:51368269-51367942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
135, 56
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr18:52447105-52447432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
266, 56
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr18:56247402-56247079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
2-329
               

               
Cow position:
               
chr18:52447021-52447349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
267, 56
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr18:42674651-42674384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
134, 49
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr18:52447274-52447568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
265, 60
               

               
Conread position:
               
3-309
               

               
Cow position:
               
chr18:51812382-51812075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
198, 48
               

               
Conread position:
               
3-314
               

               
Cow position:
               
chr18:42693714-42693402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
262, 55
               

               
Conread position:
               
3-314
               

               
Cow position:
               
chr18:50848669-50848981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
108, 55
               

               
Conread position:
               
3-314
               

               
Cow position:
               
chr18:51789139-51788827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
153, 48
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:42960216-42959929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
264, 49
               

               
Conread position:
               
4-309
               

               
Cow position:
               
chr18:50295355-50295661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
133, 44
               

               
Conread position:
               
5-219
               

               
Cow position:
               
chr18:51839057-51838844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
132, 46
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr18:42959636-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 53
               

               
Conread position:
               
5-256
               

               
Cow position:
               
chr18:51367511-51367261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
132, 46
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr18:54968038-54968289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
48, 64
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr18:42744045-42743793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
5-259
               

               
Cow position:
               
chr18:56247561-56247316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr18:51368434-51368173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr18:54993576-54993837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 47
               

               
Conread position:
               
5-291
               

               
Cow position:
               
chr18:55017964-55018251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
5-296
               

               
Cow position:
               
chr18:14453288-14452996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
66, 53
               

               
Conread position:
               
5-296
               

               
Cow position:
               
chr18:33064770-33064478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
264, 48
               

               
Conread position:
               
5-296
               

               
Cow position:
               
chr18:41197575-41197867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 56
               

               
Conread position:
               
5-296
               

               
Cow position:
               
chr18:42675237-42674945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
263, 53
               

               
Conread position:
               
5-296
               

               
Cow position:
               
chr18:43093250-43092958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
260, 45
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr18:42744633-42744340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 47
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr18:42959720-42959427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 47
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr18:43022819-43022526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 58
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr18:43094077-43093785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
263, 44
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr18:43119819-43119526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 46
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr18:44154115-44153829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
215, 48
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr18:44154283-44153990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
256, 58
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr18:44184886-44184593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 46
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr18:44240009-44240302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
264, 58
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr18:51765242-51764949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 46
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr18:51969675-51969959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
264, 47
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr18:53509238-53509531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
255, 43
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr18:53525692-53525985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
255, 43
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr18:53560514-53560803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
142, 45
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr18:54980316-54980608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
281, 58
               

               
Conread position:
               
5-299
               

               
Cow position:
               
chr18:43119735-43119441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 58
               

               
Conread position:
               
5-302
               

               
Cow position:
               
chr18:43022903-43022605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 45
               

               
Conread position:
               
5-302
               

               
Cow position:
               
chr18:54967872-54968167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
264, 58
               

               
Conread position:
               
5-302
               

               
Cow position:
               
chr18:55018300-55018597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
227, 46
               

               
Conread position:
               
5-306
               

               
Cow position:
               
chr18:52427801-52428103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 61
               

               
Conread position:
               
5-317
               

               
Cow position:
               
chr18:52433150-52433463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 61
               

               
Conread position:
               
5-324
               

               
Cow position:
               
chr18:40324716-40324396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 46
               

               
Conread position:
               
5-328
               

               
Cow position:
               
chr18:41948760-41948436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 53
               

               
Conread position:
               
5-328
               

               
Cow position:
               
chr18:42675489-42675165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
264, 58
               

               
Conread position:
               
5-328
               

               
Cow position:
               
chr18:42985056-42984732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 56
               

               
Conread position:
               
5-351
               

               
Cow position:
               
chr18:43022315-43021966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 46
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr18:42984804-42984398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 50
               

               
Conread position:
               
5-451
               

               
Cow position:
               
chr18:44240513-44240970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 50
               

               
Conread position:
               
6-297
               

               
Cow position:
               
chr18:40086513-40086221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 55
               

               
Conread position:
               
6-297
               

               
Cow position:
               
chr18:40086603-40086305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
6-298
               

               
Cow position:
               
chr18:43120322-43120030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
263, 52
               

               
Conread position:
               
6-314
               

               
Cow position:
               
chr18:51839392-51839083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
269, 45
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr18:43023069-43022779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 56
               

               
Conread position:
               
7-297
               

               
Cow position:
               
chr18:42837850-42837559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 44
               

               
Conread position:
               
7-297
               

               
Cow position:
               
chr18:43022649-43022358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 41
               

               
Conread position:
               
7-297
               

               
Cow position:
               
chr18:44240179-44240470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
262, 43
               

               
Conread position:
               
7-314
               

               
Cow position:
               
chr18:44239927-44240235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
261, 45
               

               
Conread position:
               
7-328
               

               
Cow position:
               
chr18:40324378-40324056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
261, 45
               

               
Conread position:
               
7-328
               

               
Cow position:
               
chr18:42960129-42959807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 44
               

               
Conread position:
               
8-204
               

               
Cow position:
               
chr18:51969837-51970032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
8-257
               

               
Cow position:
               
chr18:51400871-51401119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 50
               

               
Conread position:
               
8-263
               

               
Cow position:
               
chr18:56329092-56328838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
8-270
               

               
Cow position:
               
chr18:43053456-43053195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
8-296
               

               
Cow position:
               
chr18:42675318-42675029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
261, 43
               

               
Conread position:
               
8-296
               

               
Cow position:
               
chr18:50098978-50099267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
211, 50
               

               
Conread position:
               
8-296
               

               
Cow position:
               
chr18:51812881-51812592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
109, 53
               

               
Conread position:
               
8-297
               

               
Cow position:
               
chr18:40086684-40086389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
136, 53
               

               
Conread position:
               
8-297
               

               
Cow position:
               
chr18:40306508-40306798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 47
               

               
Conread position:
               
8-297
               

               
Cow position:
               
chr18:40324545-40324255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
252, 55
               

               
Conread position:
               
8-297
               

               
Cow position:
               
chr18:42744714-42744424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 50
               

               
Conread position:
               
8-297
               

               
Cow position:
               
chr18:42791639-42791929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
261, 50
               

               
Conread position:
               
8-297
               

               
Cow position:
               
chr18:42837933-42837643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
260, 43
               

               
Conread position:
               
8-297
               

               
Cow position:
               
chr18:42985137-42984847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
260, 44
               

               
Conread position:
               
8-297
               

               
Cow position:
               
chr18:44239760-44240050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
257, 55
               

               
Conread position:
               
8-297
               

               
Cow position:
               
chr18:51789722-51789432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
109, 40
               

               
Conread position:
               
8-298
               

               
Cow position:
               
chr18:40324881-40324591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
261, 50
               

               
Conread position:
               
8-321
               

               
Cow position:
               
chr18:56330184-56329870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
264, 55
               

               
Conread position:
               
11-217
               

               
Cow position:
               
chr18:44153623-44153419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
11-219
               

               
Cow position:
               
chr18:51969029-51969236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
11-259
               

               
Cow position:
               
chr18:1418176-1418423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
11-289
               

               
Cow position:
               
chr18:14454014-14453735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
258, 47
               

               
Conread position:
               
11-291
               

               
Cow position:
               
chr18:33093100-33092820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
11-291
               

               
Cow position:
               
chr18:44253226-44252946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
213, 40
               

               
Conread position:
               
11-296
               

               
Cow position:
               
chr18:43167966-43168252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
264, 40
               

               
Conread position:
               
11-297
               

               
Cow position:
               
chr18:40324206-40323920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
264, 52
               

               
Conread position:
               
11-297
               

               
Cow position:
               
chr18:43093496-43093209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
264, 50
               

               
Conread position:
               
11-297
               

               
Cow position:
               
chr18:43175266-43174980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 42
               

               
Conread position:
               
11-298
               

               
Cow position:
               
chr18:52427639-52427926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
258, 47
               

               
Conread position:
               
11-298
               

               
Cow position:
               
chr18:52432988-52433275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
258, 47
               

               
Conread position:
               
11-309
               

               
Cow position:
               
chr18:52446946-52447245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
258, 47
               

               
Conread position:
               
11-312
               

               
Cow position:
               
chr18:43174846-43174544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 52
               

               
Conread position:
               
11-314
               

               
Cow position:
               
chr18:40075029-40075333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
11-315
               

               
Cow position:
               
chr18:50021719-50021413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
256, 33
               

               
Conread position:
               
11-321
               

               
Cow position:
               
chr18:40306259-40306570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
267, 42
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chr18:52447366-52447684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
254, 47
               

               
Conread position:
               
12-258
               

               
Cow position:
               
chr18:51367588-51367343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
12-297
               

               
Cow position:
               
chr18:56247808-56247520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 48
               

               
Conread position:
               
13-267
               

               
Cow position:
               
chr18:51368510-51368257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
13-314
               

               
Cow position:
               
chr18:42675397-42675095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
252, 39
               

               
Conread position:
               
13-328
               

               
Cow position:
               
chr18:40086008-40085695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
255, 31
               

               
Conread position:
               
14-259
               

               
Cow position:
               
chr18:53586234-53585990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
14-259
               

               
Cow position:
               
chr18:55066765-55066521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
14-295
               

               
Cow position:
               
chr18:53586486-53586204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
264, 37
               

               
Conread position:
               
14-297
               

               
Cow position:
               
chr18:56494189-56494473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
247, 55
               

               
Conread position:
               
14-328
               

               
Cow position:
               
chr18:41197500-41197815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
59, 47
               

               
Conread position:
               
16-267
               

               
Cow position:
               
chr18:43120396-43120146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
17-297
               

               
Cow position:
               
chr18:42985548-42985267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
244, 34
               

               
Conread position:
               
21-267
               

               
Cow position:
               
chr18:51812784-51812539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
21-297
               

               
Cow position:
               
chr18:42960370-42960090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
21-297
               

               
Cow position:
               
chr18:51789625-51789348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
254, 37
               

               
Conread position:
               
21-298
               

               
Cow position:
               
chr18:43175592-43175315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 32
               

               
Conread position:
               
21-328
               

               
Cow position:
               
chr18:44398423-44398115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
248, 42
               

               
Conread position:
               
23-267
               

               
Cow position:
               
chr18:51839123-51838880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
23-297
               

               
Cow position:
               
chr18:53587065-53586790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
115, 32
               

               
Conread position:
               
29-297
               

               
Cow position:
               
chr18:43093727-43093461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
239, 26
               

               
Conread position:
               
29-301
               

               
Cow position:
               
chr18:54993516-54993788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
126, 23
               

               
Conread position:
               
60-296
               

               
Cow position:
               
chr18:52012471-52012235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
186, 24
               

               
Conread position:
               
63-296
               

               
Cow position:
               
chr18:41949375-41949140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
63-297
               

               
Cow position:
               
chr18:44184913-44184677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
63-328
               

               
Cow position:
               
chr18:42837963-42837696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
205, 0
               

               
Conread position:
               
67-296
               

               
Cow position:
               
chr18:43023093-43022863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
204, 5
               

               
Conread position:
               
67-300
               

               
Cow position:
               
chr18:42790941-42791176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
211, 0
               

               
Conread position:
               
71-267
               

               
Cow position:
               
chr18:51969815-51970011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
169, 150
               

               
Conread position:
               
71-328
               

               
Cow position:
               
chr18:51367614-51367355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
198, 0
               

               
Conread position:
               
72-296
               

               
Cow position:
               
chr18:50271779-50272005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
199, 0
               

               
Conread position:
               
72-309
               

               
Cow position:
               
chr18:44253334-44253096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
195, 217
               

               
Conread position:
               
73-296
               

               
Cow position:
               
chr18:14454037-14453812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
205, 0
               

               
Conread position:
               
73-297
               

               
Cow position:
               
chr18:42985577-42985351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
195, 0
               

               
Conread position:
               
74-296
               

               
Cow position:
               
chr18:44154470-44154243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
89, 157
               

               
Conread position:
               
75-328
               

               
Cow position:
               
chr18:42744732-42744477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
193, 0
               

               
Conread position:
               
75-328
               

               
Cow position:
               
chr18:43175698-43175452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
196, 102
               

               
Conread position:
               
79-296
               

               
Cow position:
               
chr18:40086947-40086728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
177, 172
               

               
Conread position:
               
79-298
               

               
Cow position:
               
chr18:43048739-43048519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
122, 118
               

               
Conread position:
               
83-328
               

               
Cow position:
               
chr18:14453295-14453048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
139-297
               

               
Cow position:
               
chr18:44184921-44184761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
147-297
               

               
Cow position:
               
chr18:42985587-42985435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
40, 30
               
Show alignments to all cow chromosomes.