Cow genome map


           Conread name:
           Ss1.1-rtes14_b13.5
        

               Conread position:
               1-233
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-254
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-254
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               231, 52
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-267
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               210, 57
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               267, 60
               

               Conread position:
               1-292
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               63, 42
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               161, 57
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               77, 51
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               268, 51
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               271, 49
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               194, 57
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               53, 62
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               267, 57
               

               Conread position:
               1-309
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               271, 49
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               271, 52
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               267, 49
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               267, 60
               

               Conread position:
               1-320
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               119, 57
               

               Conread position:
               2-253
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               2-259
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               72, 56
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               2-271
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               2-280
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               235, 56
               

               Conread position:
               2-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               273, 51
               

               Conread position:
               2-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               269, 56
               

               Conread position:
               2-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               267, 56
               

               Conread position:
               2-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               270, 61
               

               Conread position:
               2-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               267, 60
               

               Conread position:
               2-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               267, 49
               

               Conread position:
               2-296
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               72, 56
               

               Conread position:
               2-296
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               135, 56
               

               Conread position:
               2-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               270, 56
               

               Conread position:
               2-296
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               179, 64
               

               Conread position:
               2-297
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               267, 61
               

               Conread position:
               2-297
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               56, 73
               

               Conread position:
               2-297
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               270, 61
               

               Conread position:
               2-297
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               263, 51
               

               Conread position:
               2-298
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               56, 42
               

               Conread position:
               2-302
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               109, 53
               

               Conread position:
               2-302
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               64, 49
               

               Conread position:
               2-314
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               149, 56
               

               Conread position:
               2-317
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               45, 62
               

               Conread position:
               2-317
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               266, 51
               

               Conread position:
               2-337
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               267, 56
               

               Conread position:
               3-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               262, 41
               

               Conread position:
               3-296
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               265, 55
               

               Conread position:
               5-259
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               228, 53
               

               Conread position:
               5-264
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               5-264
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               5-295
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               129, 58
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 53
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               157, 47
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               227, 45
               

               Conread position:
               5-297
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               68, 48
               

               Conread position:
               5-297
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               273, 45
               

               Conread position:
               5-324
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               266, 48
               

               Conread position:
               5-328
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               264, 53
               

               Conread position:
               8-296
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               256, 64
               

               Conread position:
               8-296
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               41, 62
               

               Conread position:
               8-297
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               257, 50
               

               Conread position:
               8-298
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               261, 55
               

               Conread position:
               8-303
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               148, 15
               

               Conread position:
               11-296
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               255, 40
               

               Conread position:
               11-314
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               53, 129
               

               Conread position:
               11-337
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               257, 47
               

               Conread position:
               17-317
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               224, 34
               

               Conread position:
               29-295
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               246, 29
               

               Conread position:
               71-328
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               198, 0
               
Show alignments to all cow chromosomes.