Cow genome map


           Conread name:
           Ss1.1-rtes14_b13.5
        

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-258
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-259
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               170, 49
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               231, 57
               

               Conread position:
               1-328
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               271, 57
               

               Conread position:
               2-203
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               2-241
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               2-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               56, 47
               

               Conread position:
               2-255
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               2-270
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               2-270
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 61
               

               Conread position:
               2-274
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               2-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               270, 70
               

               Conread position:
               2-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               266, 56
               

               Conread position:
               2-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               270, 56
               

               Conread position:
               2-296
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               161, 56
               

               Conread position:
               2-297
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               267, 56
               

               Conread position:
               2-297
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               46, 61
               

               Conread position:
               2-297
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               270, 56
               

               Conread position:
               2-309
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               67, 56
               

               Conread position:
               2-314
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               263, 56
               

               Conread position:
               2-314
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               257, 61
               

               Conread position:
               2-328
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               267, 61
               

               Conread position:
               2-328
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               170, 56
               

               Conread position:
               3-200
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               3-297
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               269, 55
               

               Conread position:
               3-314
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               269, 48
               

               Conread position:
               3-328
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               137, 55
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               256, 53
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               263, 46
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               59, 53
               

               Conread position:
               5-314
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               43, 50
               

               Conread position:
               8-296
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               251, 61
               

               Conread position:
               8-296
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               194, 53
               

               Conread position:
               8-328
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               129, 50
               

               Conread position:
               11-296
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               254, 40
               

               Conread position:
               11-297
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               258, 41
               

               Conread position:
               16-314
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               256, 35
               

               Conread position:
               17-297
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               155, 34
               

               Conread position:
               18-314
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               214, 40
               

               Conread position:
               23-328
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               50, 27
               
Show alignments to all cow chromosomes.