Cow genome map
| Conread name: | Ss1.1-rtes14_b13.5 |
| Conread position: | 1-214 |
| Cow position: | chr3:68046098-68046310 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-249 |
| Cow position: | chr3:68027505-68027752 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-264 |
| Cow position: | chr3:62743169-62743431 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-297 |
| Cow position: | chr3:68027253-68027550 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 266, 62 |
| Conread position: | 1-297 |
| Cow position: | chr3:68045678-68045975 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 232, 71 |
| Conread position: | 1-328 |
| Cow position: | chr3:62722080-62721752 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 234, 50 |
| Conread position: | 1-421 |
| Cow position: | chr3:62742688-62743115 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 195, 57 |
| Conread position: | 2-296 |
| Cow position: | chr3:62721911-62721616 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 263, 53 |
| Conread position: | 2-297 |
| Cow position: | chr3:68045847-68046143 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 64, 47 |
| Conread position: | 2-328 |
| Cow position: | chr3:62722163-62721836 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 264, 56 |
| Conread position: | 2-328 |
| Cow position: | chr3:62743091-62743413 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 132, 25 |
| Conread position: | 2-329 |
| Cow position: | chr3:68027086-68027414 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 267, 61 |
| Conread position: | 5-291 |
| Cow position: | chr3:68027173-68027460 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 273, 46 |
| Conread position: | 5-296 |
| Cow position: | chr3:62722244-62721952 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 270, 46 |
| Conread position: | 5-296 |
| Cow position: | chr3:62742276-62742567 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 258, 56 |
| Conread position: | 5-333 |
| Cow position: | chr3:68045934-68046263 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 256, 50 |
| Conread position: | 8-266 |
| Cow position: | chr3:62742362-62742617 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 179, 50 |
| Conread position: | 8-314 |
| Cow position: | chr3:62721989-62721682 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 253, 56 |
| Conread position: | 8-328 |
| Cow position: | chr3:68027344-68027665 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 261, 40 |
| Conread position: | 11-297 |
| Cow position: | chr3:68027011-68027298 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 98, 50 |
| Conread position: | 11-328 |
| Cow position: | chr3:68045604-68045922 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 98, 50 |
| Conread position: | 21-297 |
| Cow position: | chr3:62722312-62722035 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 248, 32 |
| Conread position: | 63-309 |
| Cow position: | chr3:68027482-68027730 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 95-328 |
| Cow position: | chr3:62722323-62722088 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 174, 0 |
Show alignments to all cow chromosomes.