Cow genome map
| Conread name: | Ss1.1-rtes14_b13.5 |
| Conread position: | 1-214 |
| Cow position: | chr8:55581487-55581699 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-258 |
| Cow position: | chr8:46817130-46817386 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 138, 57 |
| Conread position: | 1-259 |
| Cow position: | chr8:48406629-48406372 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-270 |
| Cow position: | chr8:6958003-6957736 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-290 |
| Cow position: | chr8:46816038-46816328 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 271, 62 |
| Conread position: | 1-296 |
| Cow position: | chr8:46816458-46816754 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 268, 57 |
| Conread position: | 1-296 |
| Cow position: | chr8:46816962-46817258 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 277, 50 |
| Conread position: | 1-297 |
| Cow position: | chr8:46816710-46817007 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 108, 57 |
| Conread position: | 1-305 |
| Cow position: | chr8:46817046-46817351 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 277, 57 |
| Conread position: | 1-309 |
| Cow position: | chr8:46816374-46816683 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 260, 57 |
| Conread position: | 1-309 |
| Cow position: | chr8:46816878-46817187 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 277, 50 |
| Conread position: | 1-314 |
| Cow position: | chr8:46816206-46816520 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 107, 57 |
| Conread position: | 1-314 |
| Cow position: | chr8:46816626-46816940 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 267, 47 |
| Conread position: | 1-324 |
| Cow position: | chr8:55581235-55581559 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 260, 57 |
| Conread position: | 1-328 |
| Cow position: | chr8:45201431-45201759 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 267, 57 |
| Conread position: | 1-328 |
| Cow position: | chr8:48407553-48407225 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 270, 50 |
| Conread position: | 2-268 |
| Cow position: | chr8:48407048-48406782 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 147, 56 |
| Conread position: | 2-296 |
| Cow position: | chr8:55581152-55581447 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 276, 61 |
| Conread position: | 2-297 |
| Cow position: | chr8:46816123-46816419 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 276, 49 |
| Conread position: | 2-297 |
| Cow position: | chr8:46816543-46816838 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 270, 61 |
| Conread position: | 2-297 |
| Cow position: | chr8:48407132-48406836 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 269, 56 |
| Conread position: | 2-298 |
| Cow position: | chr8:55581068-55581364 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 276, 61 |
| Conread position: | 2-308 |
| Cow position: | chr8:48407468-48407161 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 270, 61 |
| Conread position: | 2-309 |
| Cow position: | chr8:45201180-45201488 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 263, 56 |
| Conread position: | 2-309 |
| Cow position: | chr8:46816795-46817103 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 276, 56 |
| Conread position: | 2-314 |
| Cow position: | chr8:45201096-45201409 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 267, 61 |
| Conread position: | 2-314 |
| Cow position: | chr8:45201516-45201829 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 273, 56 |
| Conread position: | 2-314 |
| Cow position: | chr8:55581320-55581633 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 266, 49 |
| Conread position: | 2-316 |
| Cow position: | chr8:46816291-46816606 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 222, 56 |
| Conread position: | 2-328 |
| Cow position: | chr8:45201600-45201927 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 270, 48 |
| Conread position: | 2-328 |
| Cow position: | chr8:48407300-48406973 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 223 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 120, 56 |
| Conread position: | 2-328 |
| Cow position: | chr8:55580900-55581227 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 276, 54 |
| Conread position: | 3-259 |
| Cow position: | chr8:55581405-55581660 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 4-309 |
| Cow position: | chr8:46815957-46816263 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 265, 40 |
| Conread position: | 5-328 |
| Cow position: | chr8:55580987-55581311 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 273, 53 |
| Conread position: | 8-297 |
| Cow position: | chr8:45201018-45201307 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 260, 50 |
| Conread position: | 21-270 |
| Cow position: | chr8:48407617-48407369 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 21-296 |
| Cow position: | chr8:55580835-55581111 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 247, 42 |
| Conread position: | 29-263 |
| Cow position: | chr8:6958059-6957826 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 72-297 |
| Cow position: | chr8:48407315-48407088 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 199, 0 |
| Conread position: | 110-297 |
| Cow position: | chr8:6958063-6957874 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 159, 0 |
Show alignments to all cow chromosomes.