Cow genome map
| Conread name: | Ss1.1-rtes14_b13.5 |
| Conread position: | 1-195 |
| Cow position: | chrX:29044847-29044654 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-259 |
| Cow position: | chrX:29044931-29044674 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-271 |
| Cow position: | chrX:25310303-25310572 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 122, 71 |
| Conread position: | 1-291 |
| Cow position: | chrX:25310219-25310509 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 271, 62 |
| Conread position: | 1-296 |
| Cow position: | chrX:25324922-25324626 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 1-297 |
| Cow position: | chrX:25325342-25325045 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 268, 51 |
| Conread position: | 1-300 |
| Cow position: | chrX:25325762-25325462 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 119, 53 |
| Conread position: | 1-308 |
| Cow position: | chrX:25325510-25325202 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 277, 47 |
| Conread position: | 1-309 |
| Cow position: | chrX:25325006-25324697 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 271, 52 |
| Conread position: | 1-309 |
| Cow position: | chrX:25325426-25325117 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 268, 57 |
| Conread position: | 1-314 |
| Cow position: | chrX:25324754-25324440 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 277, 50 |
| Conread position: | 1-314 |
| Cow position: | chrX:25325174-25324860 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 217 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 267, 57 |
| Conread position: | 1-328 |
| Cow position: | chrX:29045015-29044687 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 62 |
| Conread position: | 1-328 |
| Cow position: | chrX:29045183-29044855 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 271, 51 |
| Conread position: | 1-328 |
| Cow position: | chrX:29045267-29044939 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 267, 51 |
| Conread position: | 2-217 |
| Cow position: | chrX:25324585-25324371 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 2-291 |
| Cow position: | chrX:25309968-25310258 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 266, 61 |
| Conread position: | 2-296 |
| Cow position: | chrX:25325257-25324962 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 279, 56 |
| Conread position: | 2-296 |
| Cow position: | chrX:25325593-25325298 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 263, 56 |
| Conread position: | 2-296 |
| Cow position: | chrX:29045098-29044803 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 267, 61 |
| Conread position: | 2-297 |
| Cow position: | chrX:25309800-25310096 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 266, 56 |
| Conread position: | 5-297 |
| Cow position: | chrX:29045746-29045453 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 264, 53 |
| Conread position: | 5-302 |
| Cow position: | chrX:25324834-25324537 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 266, 58 |
| Conread position: | 20-314 |
| Cow position: | chrX:29045332-29045037 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 249, 46 |
| Conread position: | 79-327 |
| Cow position: | chrX:29045757-29045507 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 179, 0 |
| Conread position: | 82-298 |
| Cow position: | chrX:25325598-25325380 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 187, 0 |
Show alignments to all cow chromosomes.